- Volume 77, Issue 11, 1996
Volume 77, Issue 11, 1996
- Plant
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Identification and molecular properties of a 306 nucleotide viroid associated with apple dimple fruit disease
More LessA new viroid associated with an apple fruit disorder similar to, but more severe than, the dapple apple disease induced in some varieties by apple scar skin viroid (ASSVd) has been found. The new viroid, tentatively termed apple dimple fruit viroid (ADFVd), is a circular RNA of 306 nucleotides which adopts a quasi-rod-like conformation of minimum free energy. It contains the core nucleotides of the central conserved region (CCR) of the ASSVd group as well as the terminal conserved region (TCR) present in all members of the ASSVd and potato spindle tuber viroid (PSTVd) monophyletic groups. ADFVd has the highest sequence similarity with ASSVd and the 294 nucleotide citrus viroid CVd-IIIb, sharing with the latter an almost identical left terminal domain. The right- and left-hand termini of ADFVd are formed by almost perfect duplications of sequences found in the CCR upper and lower strands, respectively, of PSTVd and closely related viroids.
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In vitro-generated ‘inverse’ chimeric Coleus blumei viroids evolve in vivo into infectious RNA replicons
More LessThe three Coleus blumei viroids (CbVd) CbVd 1-RL, CbVd 2-RL and CbVd 3-RL occur naturally in plants of Coleus blumei cultivar (cv.) ‘Ruhm von Luxemburg’. CbVd 2-RL is a viroid chimera made up of the right half of CbVd 1-RL and the left half of CbVd 3-RL. Using the cDNAs of the left half of CbVd 1-RL and the right half of CbVd 3-RL, ‘inverse’ viroid chimeras (CbVd-Ch1 and CbVd-Ch2) were constructed in vitro as dimeric cDNA units. The in vitro-generated cDNA-transcripts of CbVd-Ch1 and CbVd-Ch2 were used to inoculate plants of Coleus blumei cv. ‘Ruhm von Luxemburg’ harbouring CbVd 1-RL and CbVd 3-RL, leading to the emergence of new viroid-like RNA replicons, named CbVd A-1 and CbVd A-2, that hitherto have not been found in Coleus plants. The sequences of CbVd A-1 and CbVd A-2 are not identical to the corresponding sequences of the cDNA-transcripts of CbVd-Ch1 and CbVd-Ch2, but show a deletion of a segment at the border of the two original halves as well as two U to A transitions. When the cDNA-transcripts of CbVd-Ch1 and CbVd-Ch2 were used to inoculate plants of Coleus blumei cv. ‘Scarlet Dragonfly’ that were either viroid-free or infected with CbVd 1-RL and CbVd 3-RL, no new viroid-like RNAs emerged. However, the cDNA-transcripts of CbVd A-1 and CbVd A-2 are infectious by mechanical inoculation of viroid-free plants of cv. ‘Scarlet Dragonfly’, thus proving their viroid nature.
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The satellite RNAs associated with the groundnut rosette disease complex and pea enation mosaic virus: sequence similarities and ability of each other’s helper virus to support their replication
More LessPea enation mosaic virus (PEMV) and the causal agents of groundnut rosette disease are diverse examples of disease complexes involving two RNA species, one of which is related to the genomes of luteoviruses and the other to those of umbraviruses. In both complexes, these viral RNA components may be supplemented with satellite RNAs that are dependent on the umbravirus component for replication and systemic movement, and on the luteovirus component for encapsidation and vector transmission. Sequence analysis identified regions of similarity between the satellites of groundnut rosette virus (GRV) and PEMV, particularly at the 5′ and 3′ termini and around duplicate sequence repeats present in each satellite RNA. The umbravirus GRV and the umbravirus-like PEMV RNA-2 were each able to support the replication and systemic spread of homologous and heterologous satellites. The presence of the PEMV satellite in infections with GRV had no effect on symptom expression in Nicotiana spp. or in Arachis hypogaea. Likewise, in Pisum sativum, the GRV satellite had no effect on the symptoms induced by PEMV. However, the intense yellow blotch symptoms induced in Nicotiana benthamiana by the YB3 GRV satellite in conjunction with GRV were also manifested when PEMV was the helper. Although PEMV RNA-1 was capable of supporting the encapsidation and aphid transmission of the GRV satellite, no evidence was obtained that the essential role of the GRV satellite in the aphid transmission of GRV could be supplied by the PEMV satellite. These data further strengthen the hypothesis of an evolutionary relationship between PEMV and the luteovirus-umbravirus complexes.
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The movement proteins of cowpea mosaic virus and cauliflower mosaic virus induce tubular structures in plant and insect cells
The movement proteins (MP) of cowpea mosaic virus and cauliflower mosaic virus (CaMV) are associated with tubular structures in vivo which participate in the transmission of virus particles from cell to cell. Both proteins have been expressed in plant protoplasts and insect cells. In all cases, immunofluorescent histochemistry showed that the MPs accumulate intracellularly as tubular extensions projecting from the cell surface. Additionally, electron microscopy revealed intracellular MP aggregates in CaMV MP-expressing cells. The data presented establish common features for the tubule-forming MPs: no other virus gene products are required for tubule formation and unique plant components (e.g. plasmodesmata) are not essential for tubule synthesis.
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- Other Agents
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Novel polymorphisms in the caprine PrP gene: a codon 142 mutation associated with scrapie incubation period
Age at disease onset and rate of progression of transmissible spongiform encephalopathies in man, sheep and mice are modulated by the host genome, in particular by the PrP gene and its allelic forms. Analysis of the caprine PrP gene revealed several different alleles. Four PrP protein variants were found, three of which were goat specific with single amino acid changes at codons 142, 143 and 240. The fourth was identical to the most common sheep PrP protein variant (Ala136-Arg154-Gln171). The dimorphism at codon 142 (Ile → Met) appeared to be associated with differing disease incubation periods in goats experimentally infected with isolates of bovine spongiform encephalopathy, sheep scrapie CH1641 or sheep-passaged ME7 scrapie.
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- Phage
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Characterization of Vibrio cholerae EITor typing phage D10
More LessThe Vibrio cholerae EITor typing phage D10 was characterized. The adsorption kinetics of the phage on V. cholerae MAK757 strain were biphasic in nature. Intracellular growth was characterized by an eclipse period, latent period and burst size which were 20 min, 25 min and 80 particles per cell respectively. The phage yield was dependent on the concentration and time of addition of DNA synthesis inhibitors such as nalidixic acid and novobiocin, and RNA synthesis inhibitors such as rifampicin. The 32 ± 0.2 kb linear double-stranded DNA molecule has unique termini. A restriction map of the phage DNA was constructed with the enzymes BamHI, HindIII and PstI.
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- Corrigendum
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