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Volume 70, Issue 3

sp. nov., isolated from a freshwater river Free

Abstract

Strain TTM-71, isolated from a freshwater river in Taiwan, was characterized using a polyphasic taxonomic approach. Phylogenetic analyses based on 16S rRNA gene sequences and an up-to-date bacterial core gene set (92 protein clusters) indicated that strain TTM-71 is affiliated with species in the genus . The 16S rRNA gene sequence similarity indicated that strain TTM-71 is closely related to species within the genus (94.7–95.5 % sequence similarity) and had a high sequence similarity with SR 2-06 (95.5 %). Strain TTM-71 showed 70.3 % average nucleotide identity and 24.9 % digital DNA–DNA hybridization identity with YT21. Cells were Gram-stain-negative, aerobic, motile by gliding, rod-shaped and formed beige-colored colonies. Optimal growth occurred at 20 °C, pH 8, and in the presence of 0.5 % NaCl. The major fatty acids of strain TTM-71 were iso-C, iso-C G and summed feature 3 (comprising C ω and/or C ω). The predominant hydroxy fatty acid was iso-C 3-OH. The polar lipid profile consisted of a mixture of phosphatidylethanolamine, four uncharacterized aminophospholipids, one uncharacterized aminolipid, one uncharacterized phospholipid and one uncharacterized lipid. The predominant polyamine was homospermidine. The only isoprenoid quinone was MK-7. Genomic DNA G+C content was 45.6 mol%. On the basis of the polyphasic evidence presented, strain TTM-71 is considered to represent a novel species of the genus , for which the name sp. nov. is proposed. The type strain is TTM-71 (=BCRC 81160=LMG 31017=KCTC 62871).

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Keyword(s): Chitinophagaceae , Chitinophagales , Chitinophagia and Filimonas effusa sp. nov.
© 2020 The Authors
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2020-02-25
2024-04-27
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Filimonas effusa sp. nov., isolated from a freshwater river
Int J Syst Evol Microbiol 70, 1508 (2020); https://doi.org/10.1099/ijsem.0.003875
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