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Abstract

A Gram-stain-negative bacterium, designated CM5-1, was isolated from a sediment sample collected from the East Pacific Ocean. 16S rRNA gene sequence analysis revealed that strain CM5-1 belongs to the genus Devosia , with closely related type strains Devosia submarina KMM 9415 (98.6 %), Devosia psychrophila Cr7-05 (98.6 %) and Devosia psychrophila E84 (98.2 %). Up-to-date bacterial core gene set analysis revealed that strain CM5-1 represents one independent lineage with D. submarina KMM 9415. The average nucleotide identity values of CM5-1 with D. submarina KMM 9415 and D. psychrophila Cr7-05 are 80.1 and 77.9 %, respectively. In silico DNA–DNA hybridization values between strain CM5-1 and D. submarina KMM 9415 and D. psychrophila Cr7-05 are 23.8 and 21.9 %, respectively. Strain CM5-1 contains diphosphatidylglycerol, phosphatidylglycerol and glycolipid as major polar lipids. The sole isoprenoid quinone is ubiquinone-10, and C18 : 1ω7c and 11-methyl C18 : 1ω7c are the dominant cellular fatty acids. The G+C content of the genomic DNA is 61.4 mol%. Differential phylogenetic distinctiveness and chemotaxonomic differences, together with the phenotypic properties observed in this study, revealed that strain CM5-1 could be differentiated from closely related species. Therefore, we propose strain CM5-1 as a novel species of the genus Devosia , for which the name Devosia naphthalenivorans sp. nov. is suggested. The type strain is CM5-1 (=JCM32509=CGMCC 1.13553).

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2019-05-02
2019-09-22
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