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Volume 73, Issue 12

sp. nov., isolated from a tidal flat sediment No Access

Abstract

An orange-coloured bacterium, designated as strain GRR-S3-23, was isolated from a tidal flat sediment collected from Garorim Bay, Chuncheongbuk-do, Republic of Korea. Cells of GRR-S3-23 were aerobic, Gram-stain-negative, rod-shaped and motile. GRR-S3-23 grew at 18–40 °C (optimum, 30 °C), pH 7.0–9.0 (optimum, pH 7.0) and with 2–4 % NaCl (optimum, 2–3 % w/v). Results of 16S rRNA gene sequence analysis indicated that GRR-S3-23 was closely related to a4 (97.6 %), followed by SMK-4 (97.5 %), MBIC 1140 (97.4 %), TLL-A2 (97.3 %), JO-1 (97.2 %),and YKTF-3 (97.1 %). The average amino acid identity values between GRR-S3-23 and the related strains were 86.8–72.8 %, the average nucleotide identity values were 83.3–74.1 %, and the digital DNA–DNA hybridization values were 27.0–19.6 %. GRR-S3-23 possessed menaquinone-6 (MK-6) as major respiratory quinone and had summed feature 3 (Cω7 and/or Cω6, 20.6 %) and iso-CG (10.8 %) as major fatty acids (>10.0 %). The polar lipid profiles of GRR-S3-23 contained phosphatidylethanolamine, one unidentified aminolipid, one unidentified aminophospholipid, three unidentified lipids, one unidentified glycolipid and four unidentified phospholipids. The DNA G+C content of GRR-S3-23 was 33.7%. On the basis of the results of the polyphasic analysis involving phylogenetic, phylogenomic, physiological and chemotaxonomic analyses described in this study, GRR-S3-23 is considered to represent a novel species within the genus , for which the name is proposed. The type strain is GRR-S3-23 (=KCTC 102029=KACC 23271=JCM 36353).

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  • Accepted:
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Keyword(s): Flavobacteriaceae , marine bacteria , Tenacibaculum and tidal flat sediment
Funding
This study was supported by the:
  • Development of living shoreline technology based on blue carbon science toward climate change adaptation" of Korea Institute of Marine Science & Technology Promotion (KIMST) funded by the Ministry of Oceans and Fisheries (KIMST-20220526) (Award KIMST-20220526)
    • Principle Award Recipient: Hyun LeeSang
© 2023 The Authors
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2023-12-20
2024-05-08
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Tenacibaculum tangerinum sp. nov., isolated from a tidal flat sediment
Int J Syst Evol Microbiol 73, 006203 (2023); https://doi.org/10.1099/ijsem.0.006203
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