1887

Abstract

A Gram-stain-positive, rod-shaped, endospore-forming, aerobic bacterial strain, designated ZS111008, was isolated from high-temperature Daqu, a starter for production of Chinese Jiang-flavour Baijiu, and was characterized by polyphasic taxonomy. This novel isolate grew in the presence of 0–5 % (w/v) NaCl, at pH 6.0–9.0 and 25–45 °C; optimum growth was observed with 1 % (w/v) NaCl, at pH 8.0 and 30 °C. A comparative analysis of the 16S rRNA gene sequence (1461 bp) of strain ZS111008 showed highest similarity to DSM12223 (96.7%), followed by PN5 (96.6%) and AMCK01000046 (96.5%). The DNA G+C content of strain ZS111008 was 37.21 mol%. The respiratory quinone was identified as menaquinone-7 and the major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylserine and one unknown phospholipid. Lys was detected as the diagnostic diamino acid in the cell wall. Based on morphological characteristics, chemotaxonomic characteristics and physiological properties, strain ZS111008 represents a novel species of the genus , for which the name sp. nov. is proposed. The type strain for this proposed species is ZS111008 (=CGMCC 1.19455=JCM 35214).

Funding
This study was supported by the:
  • National Science and Technology Fundamental Resources Investigation Program of China (Award 2021FY100900)
    • Principle Award Recipient: Zhen-MingLu
Loading

Article metrics loading...

/content/journal/ijsem/10.1099/ijsem.0.006109
2023-11-01
2024-05-08
Loading full text...

Full text loading...

References

  1. Parte AC. LPSN - List of Prokaryotic names with Standing in Nomenclature (bacterio.net), 20 years on. Int J Syst Evol Microbiol 2018; 68:1825–1829 [View Article] [PubMed]
    [Google Scholar]
  2. Rheims H, Frühling A, Schumann P, Rohde M, Stackebrandt E. Bacillus silvestris sp. nov., a new member of the genus Bacillus that contains lysine in its cell wall. Int J Syst Evol Microbiol 1999; 49:795–802 [View Article]
    [Google Scholar]
  3. Krishnamurthi S, Chakrabarti T, Stackebrandt E. Re-examination of the taxonomic position of Bacillus silvestris Rheims et al. 1999 and proposal to transfer it to Solibacillus gen. nov. as Solibacillus silvestris comb. nov. Int J Syst Evol Microbiol 2009; 59:1054–1058 [View Article] [PubMed]
    [Google Scholar]
  4. Kämpfer P, Rosselló-Mora R, Falsen E, Busse H-J, Tindall BJ. Cohnella thermotolerans gen. nov., sp. nov., and classification of “Paenibacillus hongkongensis” as Cohnella hongkongensis sp. nov. Int J Syst Evol Microbiol 2006; 56:781–786 [View Article] [PubMed]
    [Google Scholar]
  5. Mual P, Singh NK, Verma A, Schumann P, Krishnamurthi S et al. Reclassification of Bacillus isronensis Shivaji et al. 2009 as Solibacillus isronensis comb. nov. and emended description of genus Solibacillus Krishnamurthi et al. 2009. Int J Syst Evol Microbiol 2016; 66:2113–2120 [View Article] [PubMed]
    [Google Scholar]
  6. Reddy GSN, Uttam A, Shivaji S. Bacillus cecembensis sp. nov., isolated from the Pindari glacier of the Indian Himalayas. Int J Syst Evol Microbiol 2008; 58:2330–2335 [View Article] [PubMed]
    [Google Scholar]
  7. Checinska Sielaff A, Rajendran MK, Deepika P. Solibacillus kalamii sp. nov., isolated from a high-efficiency particulate arrestance filter system used in the International Space Station. Int J Syst Evol Microbiol 2017; 67:896–901 [View Article] [PubMed]
    [Google Scholar]
  8. Zheng X-W, Han B-Z. Baijiu (白酒), Chinese liquor: History, classification and manufacture. J Ethnic Foods 2016; 3:19–25 [View Article]
    [Google Scholar]
  9. Xiao C, Lu Z-M, Zhang X-J, Wang S-T, Ao L et al. Bio-heat is a key environmental driver shaping the microbial community of medium-temperature Daqu. Appl Environ Microbiol 2017; 83:01550–17 [View Article] [PubMed]
    [Google Scholar]
  10. Logan NA, Berge O, Bishop AH, Busse H-J, De Vos P et al. Proposed minimal standards for describing new taxa of aerobic, endospore-forming bacteria. Int J Syst Evol Microbiol 2009; 59:2114–2121 [View Article] [PubMed]
    [Google Scholar]
  11. Yoon S-H, Ha S-M, Kwon S, Lim J, Kim Y et al. Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies. Int J Syst Evol Microbiol 2017; 67:1613–1617 [View Article] [PubMed]
    [Google Scholar]
  12. Yarza P, Yilmaz P, Pruesse E, Glöckner FO, Ludwig W et al. Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences. Nat Rev Microbiol 2014; 12:635–645 [View Article] [PubMed]
    [Google Scholar]
  13. Kumar S, Stecher G, Tamura K. MEGA7: Molecular Evolutionary Genetics Analysis version 7.0 for bigger datasets. Mol Biol Evol 2016; 33:1870–1874 [View Article] [PubMed]
    [Google Scholar]
  14. Naruya S, Masatoshi N. The neighbor-joining method: a new method for reconstructing phylogenetic tree. Mol Biol Evol 1987; 4:406–425
    [Google Scholar]
  15. Joseph F. Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 1981; 17:368–376
    [Google Scholar]
  16. Sudhir K. A stepwise algorithm for finding minimum evolution trees. Mol Biol Evol 1996; 13:584–593 [PubMed]
    [Google Scholar]
  17. Joseph F. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 1985; 39:783–791 [PubMed]
    [Google Scholar]
  18. Smibert RM, Krieg NR. Phenotypic characterization. In Gerhardt P. eds Methods for General and Molecular Bacteriology Washington D.C: American Society for Microbiology; 1994 pp 607–654
    [Google Scholar]
  19. Xu P, Li W-J, Tang S-K, Zhang Y-Q, Chen G-Z et al. Naxibacter alkalitolerans gen. nov., sp. nov., a novel member of the family “Oxalobacteraceae” isolated from China. Int J Syst Evol Microbiol 2005; 55:1149–1153 [View Article] [PubMed]
    [Google Scholar]
  20. Cowan ST, Steel KJ. Manual for the Identification of Medical Bacteria London: Cambridge University Press; 1965
    [Google Scholar]
  21. Komagata K, Suzuki K. Lipid and cell-wall analysis in bacterial systematics. Methods Microbiol 1987; 19:161–208
    [Google Scholar]
  22. Xu P-X, Chai L-J, Qiu T, Zhang X-J, Lu Z-M et al. Clostridium fermenticellae sp. nov., isolated from the mud in a fermentation cellar for the production of the Chinese liquor, baijiu. Int J Syst Evol Microbiol 2019; 69:859–865 [View Article] [PubMed]
    [Google Scholar]
  23. Chirag J, Luis MR, Adam MP. High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries. Nat Commun 2018; 9:5114 [View Article]
    [Google Scholar]
  24. Jan PM, Joaquim SC, Rosa LPO, Markus G. TYGS and LPSN: a database tandem for fast and reliable genome-based classification and nomenclature of prokaryotes. Nucleic Acid Res 2022; 50:D801–D807 [View Article]
    [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/ijsem/10.1099/ijsem.0.006109
Loading
/content/journal/ijsem/10.1099/ijsem.0.006109
Loading

Data & Media loading...

Supplements

Supplementary material 1

PDF
This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error