Thermosipho ferrireducens sp.nov., an anaerobic thermophilic iron(III)-reducing bacterium isolated from a deep-sea hydrothermal sulfide deposits

References

1. Vargas M, Kashefi K, Blunt-Harris EL, Lovley DR. Microbiological evidence for Fe(III) reduction on early earth. Nature 1998; 395:65–67 [View Article]
   [Google Scholar]
2. Zeng X, Zhang Z, Li X, Jebbar M, Alain K et al. Caloranaerobacter ferrireducens sp. nov., an anaerobic, thermophilic, iron (III)-reducing bacterium isolated from deep-sea hydrothermal sulfide deposits. Int J Syst Evol Microbiol 2015; 65:1714–1718 [View Article] [PubMed]
   [Google Scholar]
3. Kendall MM. Isolation of a Novel Thermophilic, Iron Reducing Bacterium from a Deep-Sea Hydrothermal Vent USA: Portland State University; 2002
   [Google Scholar]
4. Antoine E, Cilia V, Meunier JR, Guezennec J, Lesongeur F et al. Thermosipho melanesiensis sp. nov., a new thermophilic anaerobic bacterium belonging to the order Thermotogales, isolated from deep-sea hydrothermal vents in the southwestern Pacific Ocean. Int J Syst Bacteriol 1997; 47:1118–1123 [View Article] [PubMed]
   [Google Scholar]
5. Kuwabara T, Kawasaki A, Uda I, Sugai A. Thermosipho globiformans sp. nov., an anaerobic thermophilic bacterium that transforms into multicellular spheroids with a defect in peptidoglycan formation. Int J Syst Evol Microbiol 2011; 61:1622–1627 [View Article] [PubMed]
   [Google Scholar]
6. Podosokorskaya OA, Bonch-Osmolovskaya EA, Godfroy A, Gavrilov SN, Beskorovaynaya DA et al. Thermosipho activus sp. nov., a novel thermophilic anaerobic hydrolytic bacterium isolated from a deep-sea sample Guaymas Basin, Gulf of California. Int J Syst Evol Microbiol 2014; 64:3307–3313 [View Article] [PubMed]
   [Google Scholar]
7. Balk M, Weijma J, Stams AJM. Thermotoga lettingae sp. nov., a novel thermophilic, methanol-degrading bacterium isolated from a thermophilic anaerobic reactor. Int J Syst Evol Microbiol 2002; 52:1361–1368 [View Article] [PubMed]
   [Google Scholar]
8. Slobodkin AI, Jeanthon C, Lharidon S, Nazina TN, Miroshnichenko ML et al. Dissimilatory reduction of Fe(III) by thermophilic bacteria and archaea in deep subsurface petroleum reservoirs of western siberia. Curr Microbiol 1999; 39:99–102 [View Article] [PubMed]
   [Google Scholar]
9. Fardeau ML, Goulhen F, Bruschi M, Khelifi N, Cayol JL et al. Archaeoglobus fulgidus and Thermotoga elfii, thermophilic isolates from deep geothermal water of the Paris Basin. Geomicrobiol J 2009; 26:119–130 [View Article]
   [Google Scholar]
10. Nelson KE, Clayton RA, Gill SR, Gwinn ML, Dodson RJ et al. Evidence for lateral gene transfer between archaea and bacteria from genome sequence of Thermotoga maritima. Nature 1999; 399:323–329 [View Article] [PubMed]
    [Google Scholar]
11. Bhandari V, Gupta RS. Molecular signatures for the phylum (class) Thermotogae and a proposal for its division into three orders (Thermotogales, Kosmotogales ord. nov. and Petrotogales ord. nov.) containing four families (Thermotogaceae, Fervidobacteriaceae fam. nov., Kosmotogace fam. nov. and Petrotogaceae fam. nov.) and a new genus Pseudothermotoga gen. nov. with five new combinations. Antonie van Leeuwenhoek 2014; 105:143–168 [View Article] [PubMed]
    [Google Scholar]
12. Urios L, Cueff-Gauchard V, Pignet P, Postec A, Fardeau ML et al. Thermosipho atlanticus sp. nov., a novel member of the Thermotogales isolated from a Mid-Atlantic Ridge hydrothermal vent. Int J Syst Evol Microbiol 2004; 54:1953–1957 [View Article] [PubMed]
    [Google Scholar]
13. Haridon SL, Miroshnichenko ML, Hippe H, Fardeau ML, Bonch-Osmolovskaya E et al. Thermosipho geolei sp. nov., a thermophilic bacterium isolated from a continental petroleum reservoir in Western Siberia. Int J Syst Evol Microbiol 2001; 51:1327–1334 [View Article] [PubMed]
    [Google Scholar]
14. Kumar S, Stecher G, Li M, Knyaz C, Tamura K. mega X: Molecular Evolutionary Genetics Analysis across computing platforms. Mole Biol Evol 2018; 35:1547–1549 [View Article]
    [Google Scholar]
15. Yoon S-H, Ha S-M, Kwon S, Lim J, Kim Y et al. Introducing EzBioCloud: A taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies. Int J Syst Evol Microbiol 2017; 67:1613–1617 [View Article] [PubMed]
    [Google Scholar]
16. Rodriguez-R LM, Konstantinidis KT. The enveomics collection: a toolbox for specialized analyses of microbial genomes and metagenomes. PeerJ Preprints 2016; 4:e1900v1
    [Google Scholar]
17. Meier-Kolthoff JP, Auch AF, Klenk HP, Göker M. Genome sequence-based species delimitation with confidence intervals and improved distance functions. BMC Bioinformatics 2013; 14:60 [View Article] [PubMed]
    [Google Scholar]
18. Richter M, Rosselló-Móra R. Shifting the genomic gold standard for the prokaryotic species definition. Proc Natl Acad Sci U S A 2009; 106:19126–19131 [View Article] [PubMed]
    [Google Scholar]
19. Wayne LG, Brenner DJ, Colwell RR, Grimont PAD, Kandler O et al. Report of the Ad Hoc Committee on Reconciliation of Approaches to Bacterial Systematics. Int J Syst Bacteriol 1987; 37:463–464
    [Google Scholar]
20. Na SI, Kim YO, Yoon SH, Ha S, Baek I. UBCG: Up-to-date bacterial core gene set and pipeline for phylogenomic tree reconstruction. J Microbiol 2018; 56:280–285 [View Article] [PubMed]
    [Google Scholar]
21. Lovley DR, Phillips EJP. Availability of ferric iron for microbial reduction in bottom sediments of the freshwater tidal potomac river. Appl Environ Microbiol 1986; 52:751–757 [View Article] [PubMed]
    [Google Scholar]
22. Alain K, Pignet P, Zbinden M. Caminicella sporogenes gen. nov., sp. nov., a novel thermophilic spore-forming bacterium isolated from an East-Pacific Rise hydrothermal vent. Int J Syst Evol Microbiol 2002; 52:1621–1628 [View Article] [PubMed]
    [Google Scholar]
23. Cline JD. Spectrophotometric determination of hydrogen sulfide in natural waters. Limnol Oceanogr 1969; 14:454–458 [View Article]
    [Google Scholar]
24. Sasser M. MIDI Technical Note 101. Identification of Bacteria by Gas Chromatography of Cellular Fatty Acids Newark, Del: MIDI, Inc; 1990
    [Google Scholar]