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Volume 70, Issue 1

sp. nov., isolated from human urine, and emended descriptions of and Free

Abstract

A novel strain, YM-1, was recovered from human urine in PR China in 2017. Cells of strain YM-1 were Gram-stain-negative, rod-shaped, aerobic, motile, non-spore-forming and poly-β-hydroxybutyrate-accumulating. The strain contained Cω6/Cω7, C and Cω7 as major fatty acids; phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol and an unidentified phospholipid as major polar lipids; and ubiquinone-8 as the predominant respiratory quinone. Comparison of 16S rRNA gene sequences indicated that this strain had highest similarities to perlucida DS-28 (98.8 %) and 389 (98.1 %). The results of phylogenetic analysis based on the 16S rRNA gene sequences revealed that the novel strain was clustered and well separated with DS-28 and 389 within the genus . The average nucleotide identity (ANI) and amino acid identity (AAI) analyses showed that this strain was not identified as DS-28 or 389, with values well below the threshold limit for species demarcation (ANI <88.1 %, AAI <88.6 %). Based on the above results, strain YM-1 is proposed to be a novel species of the genus with the name sp. nov. (YM-1=NBRC 113779=CGMCC 1.17135).

  • Received:
  • Accepted:
  • Revised:
  • Published Online:
Keyword(s): polyphasic taxonomy , urine and Vogesella urethralis sp.nov.
© 2020 The Authors
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2020-02-03
2024-05-02
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Vogesella urethralis sp. nov., isolated from human urine, and emended descriptions of Vogesella perlucida and Vogesella mureinivorans
Int J Syst Evol Microbiol 70, 624 (2020); https://doi.org/10.1099/ijsem.0.003802
/content/journal/ijsem/10.1099/ijsem.0.003802
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