1887

Abstract

The taxonomic status of is described and, based on evidence presented, transfer of the species to the genus with the name comb. nov. is proposed. This reclassification is supported by multilocus sequence analysis of the 16S rRNA gene and portions of the , and genes. Mode of cell division and existing phenotypic information also show that cannot be differentiated from the genus . The type strain of comb. nov. is ATCC BAA-66 ( = LMG 17710  = CIP 106482).

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2011-12-01
2019-08-19
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References

  1. Cole J. R. , Chai B. , Farris R. J. , Wang Q. , Kulam-Syed-Mohideen A. S. , McGarrell D. M. , Bandela A. M. , Cardenas E. , Garrity G. M. , Tiedje J. M. . ( 2007; ). The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data. . Nucleic Acids Res 35: (Database issue), D169–D172. [CrossRef] [PubMed]
    [Google Scholar]
  2. Cole J. R. , Wang Q. , Cardenas E. , Fish J. , Chai B. , Farris R. J. , Kulam-Syed-Mohideen A. S. , McGarrell D. M. , Marsh T. et al. & other authors ( 2009; ). The Ribosomal Database Project: improved alignments and new tools for rRNA analysis. . Nucleic Acids Res 37: (Database issue), D141–D145. [CrossRef] [PubMed]
    [Google Scholar]
  3. Collins M. D. , Rodrigues U. , Ash C. , Aguirre M. , Farrow J. A. E. , Martinez-Murcia A. , Phillips B. A. , Williams A. M. , Wallbanks S. . ( 1991; ). Phylogenetic analysis of the genus Lactobacillus and related lactic acid bacteria as determined by reverse transcriptase sequencing of 16S rRNA. . FEMS Microbiol Lett 77:, 5–12. [CrossRef]
    [Google Scholar]
  4. Dellaglio F. , Torriani S. . ( 1986; ). DNA-DNA homology, physiological characteristics and distribution of lactic-acid bacteria isolated from maize silage. . J Appl Bacteriol 60:, 83–92. [CrossRef]
    [Google Scholar]
  5. Ennahar S. , Cai Y. , Fujita Y. . ( 2003; ). Phylogenetic diversity of lactic acid bacteria associated with paddy rice silage as determined by 16S ribosomal DNA analysis. . Appl Environ Microbiol 69:, 444–451. [CrossRef] [PubMed]
    [Google Scholar]
  6. Felis G. E. , Dellaglio F. . ( 2007; ). Taxonomy of Lactobacilli and Bifidobacteria. . Curr Issues Intest Microbiol 8:, 44–61.[PubMed]
    [Google Scholar]
  7. Felsenstein J. . ( 1985; ). Confidence limits on phylogenies: an approach using the bootstrap. . Evolution 39:, 783–791. [CrossRef]
    [Google Scholar]
  8. Fox G. E. , Wisotzkey J. D. , Jurtshuk P. Jr . ( 1992; ). How close is close: 16S rRNA sequence identity may not be sufficient to guarantee species identity. . Int J Syst Bacteriol 42:, 166–170. [CrossRef] [PubMed]
    [Google Scholar]
  9. Haakensen M. , Dobson C. M. , Hill J. E. , Ziola B. . ( 2009; ). Reclassification of Pediococcus dextrinicus (Coster and White 1964) Back 1978 (Approved Lists 1980) as Lactobacillus dextrinicus comb. nov., and emended description of the genus Lactobacillus . . Int J Syst Evol Microbiol 59:, 615–621. [CrossRef] [PubMed]
    [Google Scholar]
  10. Hammes W. P. , Hertel C. . ( 2006; ). The genera Lactobacillus and Carnobacterium . . In The Prokaryotes, , 3rd edn., vol. 4, pp. 320–403. Edited by Dworkin M. , Falkow S. , Rosenberg E. , Schleifer K.-H. , Stackebrandt E. . . New York, NY:: Springer;.[CrossRef]
    [Google Scholar]
  11. Holzapfel W. H. , Haberer P. , Geisen R. , Björkroth J. , Schillinger U. . ( 2001; ). Taxonomy and important features of probiotic microorganisms in food and nutrition. . Am J Clin Nutr 73: (Suppl.), 365S–373S.[PubMed]
    [Google Scholar]
  12. Klein G. , Pack A. , Bonaparte C. , Reuter G. . ( 1998; ). Taxonomy and physiology of probiotic lactic acid bacteria. . Int J Food Microbiol 41:, 103–125. [CrossRef] [PubMed]
    [Google Scholar]
  13. Leisner J. J. , Rusul G. , Wee B. W. , Boo H. C. , Muhamad K. . ( 1997; ). Microbiology of chili bo, a popular Malaysian food ingredient. . J Food Prot 60:, 1235–1240.
    [Google Scholar]
  14. Leisner J. J. , Pot B. , Christensen H. , Rusul G. , Olsen J. E. , Wee B. W. , Muhamad K. , Ghazali H. M. . ( 1999; ). Identification of lactic acid bacteria from chili bo, a Malaysian food ingredient. . Appl Environ Microbiol 65:, 599–605.[PubMed]
    [Google Scholar]
  15. Leisner J. J. , Vancanneyt M. , Goris J. , Christensen H. , Rusul G. . ( 2000; ). Description of Paralactobacillus selangorensis gen. nov., sp. nov., a new lactic acid bacterium isolated from chili bo, a Malaysian food ingredient. . Int J Syst Evol Microbiol 50:, 19–24. [CrossRef] [PubMed]
    [Google Scholar]
  16. Ljungh A. , Wadstrom T. . ( 2009; ). Lactobacillus Molecular Biology: From Genomics to Probiotics. Norfolk, UK:: Caister Academic Press;.
    [Google Scholar]
  17. Naser S. M. , Dawyndt P. , Hoste B. , Gevers D. , Vandemeulebroecke K. , Cleenwerck I. , Vancanneyt M. , Swings J. . ( 2007; ). Identification of lactobacilli by pheS and rpoA gene sequence analyses. . Int J Syst Evol Microbiol 57:, 2777–2789. [CrossRef] [PubMed]
    [Google Scholar]
  18. Saitou N. , Nei M. . ( 1987; ). The neighbor-joining method: a new method for reconstructing phylogenetic trees. . Mol Biol Evol 4:, 406–425.[PubMed]
    [Google Scholar]
  19. Stiles M. E. , Holzapfel W. H. . ( 1997; ). Lactic acid bacteria of foods and their current taxonomy. . Int J Food Microbiol 36:, 1–29. [CrossRef] [PubMed]
    [Google Scholar]
  20. Tamura K. , Dudley J. , Nei M. , Kumar S. . ( 2007; ). mega4: molecular evolutionary genetics analysis (mega) software version 4.0. . Mol Biol Evol 24:, 1596–1599. [CrossRef] [PubMed]
    [Google Scholar]
  21. Thompson J. D. , Gibson T. J. , Plewniak F. , Jeanmougin F. , Higgins D. G. . ( 1997; ). The clustal_x windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. . Nucleic Acids Res 25:, 4876–4882. [CrossRef] [PubMed]
    [Google Scholar]
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vol. , part 12, pp. 2979 - 2983

16S rRNA gene phylogenetic tree reconstructed using sequences accessed from the RDP (as of 1 December 2010) for all type strains of species of the genera and , as well as sequences for two isolates (including the type-strain sequence). Type strains of the species , and are included as outliers to provide context to the phylogeny. Bar, 2% divergence. RDP accession numbers are provided for each sequence. [ PDF] (42 KB)



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