1887

Abstract

Strain DSM 44594, which produces the glycopeptide antibiotic decaplanin, is a member of the genus based on 16S rRNA gene sequence analysis and chemotaxonomic properties. It is the first member of this genus that is reported to form pseudosporangia, which resemble those of members of the genus . Phylogenetically, the novel taxon is related to , , , and . Morphological, cultural and physiological properties, the production of a unique glycolipid and DNA–DNA similarity of <55 % with phylogenetically related strains reveal that strain DSM 44594 represents a novel species of the genus, for which the name sp. nov. (type strain, FH 1845=DSM 44594=NRRL B-24209) is proposed.

Loading

Article metrics loading...

/content/journal/ijsem/10.1099/ijs.0.02586-0
2004-01-01
2019-10-20
Loading full text...

Full text loading...

/deliver/fulltext/ijsem/54/1/ijs540235.html?itemId=/content/journal/ijsem/10.1099/ijs.0.02586-0&mimeType=html&fmt=ahah

References

  1. Al-Musallam, A. A., Al-Zarban, S. S., Fasasi, Y. A., Kroppenstedt, R. M. & Stackebrandt, E. ( 2003; ). Amycolatopsis keratiniphila sp. nov., a novel keratinolytic soil actinomycete from Kuwait. Int J Syst Evol Microbiol 53, 871–874.[CrossRef]
    [Google Scholar]
  2. Bruce, J. ( 1996; ). Automated system rapidly identifies and characterizes microorganisms in food. Food Technol 50, 77–81.
    [Google Scholar]
  3. Cashion, P., Holder-Franklin, M. A., McCully, J. & Franklin, M. ( 1977; ). A rapid method for the base ratio determination of bacterial DNA. Anal Biochem 81, 461–466.[CrossRef]
    [Google Scholar]
  4. Chun, J., Kim, S. B., Oh, Y. K. & 7 other authors ( 1999; ). Amycolatopsis thermoflava sp. nov., a novel soil actinomycete from Hainan Island, China. Int J Syst Bacteriol 49, 1369–1373.[CrossRef]
    [Google Scholar]
  5. DeSoete, G. ( 1983; ). A least squares algorithm for fitting additive trees to proximity data. Psychometrika 48, 621–626.[CrossRef]
    [Google Scholar]
  6. De Ley, J., Cattoir, H. & Reynaerts, A. ( 1970; ). The quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12, 133–142.[CrossRef]
    [Google Scholar]
  7. Grabley, S., Granzer, E., Hütter, K. & 7 other authors ( 1992; ). Secondary metabolites by chemical screening. 8. Decarestrictines, a new family of inhibitors of cholesterol biosynthesis from Penicillium. I. Strain description, fermentation, isolation and properties. J Antibiot (Tokyo) 45, 56–65.[CrossRef]
    [Google Scholar]
  8. Grundy, W. E., Sinclair, A. C., Therriault, R. J., Goldstein, A. W., Ricker, C. J., Warren, H. B., Oliver, T. J. & Sylvester, J. C. ( 1957; ). Ristocetin, microbiological properties. In Antibiotics Annual 19561957, pp. 687–698. New York: Medical Encyclopedia.
  9. Hasegawa, T., Takizawa, M. & Tanida, S. ( 1983; ). A rapid analysis for chemical grouping of aerobic actinomycetes. J Gen Appl Microbiol 29, 319–322.[CrossRef]
    [Google Scholar]
  10. Huß, V. A. R., Festl, H. & Schleifer, K.-H. ( 1983; ). Studies on the spectrophotometric determination of DNA hybridization from renaturation rates. Syst Appl Microbiol 4, 184–192.[CrossRef]
    [Google Scholar]
  11. Humble, M. W., King, A. & Phillips, I. ( 1977; ). API ZYM: a simple rapid system for the detection of bacterial enzymes. J Clin Pathol 30, 275–277.[CrossRef]
    [Google Scholar]
  12. Jahnke, K.-D. ( 1992; ). Basic computer program for evaluation of spectroscopic DNA renaturation data from GILFORD system 2600 spectrometer on a PC/XT/AT type personal computer. J Microbiol Methods 15, 61–73.[CrossRef]
    [Google Scholar]
  13. Jukes, T. H. & Cantor, C. R. ( 1969; ). Evolution of protein molecules. In Mammalian Protein Metabolism, pp. 21–132. Edited by H. N. Munro. New York: Academic Press.
  14. Kilian, M. ( 1978; ). Rapid identification of Actinomycetaceae and related bacteria. J Clin Microbiol 8, 127–133.
    [Google Scholar]
  15. Kim, B., Sahin, N., Tan, G. Y. A., Zakrzewska-Czerwinska, J. & Goodfellow, M. ( 2002; ). Amycolatopsis eurytherma sp. nov., a thermophilic actinomycete isolated from soil. Int J Syst Evol Microbiol 52, 889–894.[CrossRef]
    [Google Scholar]
  16. Kutzner, H. J., Kroppenstedt, R. M. & Korn-Wendisch, F. ( 1986; ). Methoden zur Untersuchung von Streptomyceten und einigen anderen Actinomyceten, 4th edn. Report of the Institute for Microbiology, Technical University, Darmstadt and German Culture Collection. Braunschweig: DSMZ (in German).
  17. Müller, K. D., Husmann, H. & Nalik, H. P. ( 1990; ). A new and rapid method for the assay of bacterial fatty acids using high resolution capillary gas chromatography and trimethylsulfonium hydroxide. Zentbl Bakteriol 274, 174–182.[CrossRef]
    [Google Scholar]
  18. Omura, S., Tanaka, H., Tanaka, Y., Spiri-Nakagawa, P., Oiwa, R., Takahashi, Y., Matsuyama, K. & Iwai, Y. ( 1979; ). Studies on bacterial cell wall inhibitors. VII. Azureomycins A and B, new antibiotics produced by Pseudonocardia azurea sp. nov. J Antibiot (Tokyo) 32, 985–994.[CrossRef]
    [Google Scholar]
  19. Pittenger, R. C. & Brigham, R. B. ( 1956; ). Streptomyces orientalis, n. sp., the source of vancomycin. Antibiot Chemother 6, 642–647.
    [Google Scholar]
  20. Rainey, F. A., Ward-Rainey, N., Kroppenstedt, R. M. & Stackebrandt, E. ( 1996; ). The genus Nocardiopsis represents a phylogenetically coherent taxon and a distinct actinomycete lineage: proposal of Nocardiopsaceae fam. nov. Int J Syst Bacteriol 46, 1088–1092.[CrossRef]
    [Google Scholar]
  21. Sanchez, M. L., Wenzel, R. P. & Jones, R. N. ( 1992; ). In vitro activity of decaplanin (M86-1410), a new glycopeptide antibiotic. Antimicrob Agents Chemother 36, 873–875.[CrossRef]
    [Google Scholar]
  22. Shirling, E. B. & Gottlieb, D. ( 1966; ). Methods for characterization of Streptomyces species. Int J Syst Bacteriol 16, 313–340.[CrossRef]
    [Google Scholar]
  23. Smith, P. B., Tomfohrde, K. M., Rhoden, D. L. & Balows, A. ( 1972; ). API system: a multitube micromethod for identification of Enterobacteriaceae. Appl Microbiol 24, 449–452.
    [Google Scholar]
  24. Stackebrandt, E. & Goebel, B. M. ( 1994; ). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846–849.[CrossRef]
    [Google Scholar]
  25. Wayne, L. G., Brenner, D. J., Colwell, R. R. & 9 other authors ( 1987; ). International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37, 463–464.[CrossRef]
    [Google Scholar]
  26. Williams, S. T., Goodfellow, M. & Alderson, G. ( 1989; ). Genus Streptomyces. In Bergey's Manual of Systematic Bacteriology, vol. 4, pp. 2452–2492. Edited by S. T. Williams, M. E. Sharpe & J.G. Holt. Baltimore: Williams & Wilkins.
  27. Wink, J. M., Kroppenstedt, R. M., Ganguli, B. N., Nadkarni, S. R., Schumann, P., Seibert, G. & Stackebrandt, E. ( 2003; ). Three new antibiotic producing species of the genus Amycolatopsis, Amycolatopsis balhimycina sp. nov., A. tolypomycina sp. nov., A. vancoresmycina sp. nov., and description of Amycolatopsis keratiniphila subsp. keratiniphila subsp. nov. and A. keratiniphila subsp. nogabecina subsp. nov. Syst Appl Microbiol 26, 38–46.[CrossRef]
    [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/ijsem/10.1099/ijs.0.02586-0
Loading
/content/journal/ijsem/10.1099/ijs.0.02586-0
Loading

Data & Media loading...

Most Cited This Month

This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error