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Abstract

A Gram-positive, yellow-pigmented, branched-hyphae-forming micro-organism, strain 09-Be-007, was isolated from the wall of an indoor environment. Based on 16S rRNA gene sequence similarity studies, strain 09-Be-007 belonged to the genus . The novel isolate showed sequence similarities of 98.8 % to V54A, 98.9 % to V45, 98.1 % to DSM 44121, 98.2 % to RS16, 96.7 % to CC 0387 and 97.8 % to DSM 43110, the type strain of the type species of this genus. Cell wall sugars of strain 09-Be-007 were galactose, rhamnose and glucose. The diagnostic diamino acid of the cell-wall peptidoglycan was lysine. The major menaquinones detected were MK-9(H) and MK-9(H). Major polar lipids were diphosphatidylglycerol, phosphatidylglycerol and phosphatidylinositol. Major fatty acids were iso-C and anteiso-C; moderate amounts of anteiso-C, iso-C and iso-C were also found. All these data supported the affiliation of strain 09-Be-007 to the genus . DNA–DNA hybridization values and physiological and biochemical data enabled strain 09-Be-007 to be differentiated genotypically and phenotypically from the six recognized species of the genus . For these reasons, strain 09-Be-007 represents a novel species, for which the name sp. nov. is proposed, with 09-Be-007 (=DSM 22081=CCM 7634) as the type strain.

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2010-03-01
2020-01-18
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References

  1. Alonso-Vega, P., Santamaría, R., Martínez-Molina,E. & Trujillo, M. E. ( 2008; ). Promicromonosporakroppenstedtii sp. nov., isolated from a sandy soil. Int JSyst Evol Microbiol 58, 1476–1481.
    [Google Scholar]
  2. Becker, B., Lechevalier, M. P. & Lechevalier, H. A. ( 1965; ). Chemical composition of cell-wall preparations fromstrains of various form-genera of aerobic actinomycetes. Appl Microbiol 13, 236–243.
    [Google Scholar]
  3. Busse, H.-J., Zlamala, C., Buczolits, S., Lubitz, W., Kämpfer,P. & Takeuchi, M. ( 2003; ). Promicromonosporavindobonensis sp. nov. and Promicromonospora aerolata sp. nov.,isolated from the air of the medieval ‘Virgilkapelle’ in Vienna. Int J Syst Evol Microbiol 53, 1503–1507.[CrossRef]
    [Google Scholar]
  4. Cazemier, A. E., Verdoes, J. C., Reubsaet, F. A. G., Hackstein,J. H. P., van der Drift, C. & Op den Camp, H. J. M. ( 2003; ). Promicromonospora pachnodae sp. nov., a member of the (hemi)cellulolytic hindgut flora of larvae of the scarab beetle Pachnoda marginata. Antonie van Leeuwenhoek 83, 135–148.[CrossRef]
    [Google Scholar]
  5. Collins, M. D., Pirouz, T., Goodfellow, M. & Minnikin, D.E. ( 1977; ). Distribution of menaquinones in actinomycetesand corynebacteria. J Gen Microbiol 100, 221–230.[CrossRef]
    [Google Scholar]
  6. Groth, I., Schumann, P., Weiss, N., Martin, K. & Rainey,F. A. ( 1996; ). Agrococcus jenensis gen. nov.,sp. nov., a new genus of actinomycetes with diaminobutyric acid in the cellwall. Int J Syst Bacteriol 46, 234–239.[CrossRef]
    [Google Scholar]
  7. Jäger, K., Márialigeti, K., Hauck, M. & Barabás,G. ( 1983; ). Promicromonospora enterophilasp. nov., a new species of monospore actinomycetes. Int J SystBacteriol 33, 525–531.
    [Google Scholar]
  8. Jiang, Y., Wiese, J., Cao, Y.-R., Xu, L.-H., Imhoff, J. F. &Jiang, C.-L. ( 2009; ). Promicromonospora flavasp. nov., isolated from sediment of the Baltic Sea. Int J SystEvol Microbiol 59, 1599–1602.
    [Google Scholar]
  9. Kalakoutskii, L. V., Agre, N. S., Prauser, H. & Evtushenko,L. I. ( 1989; ). Genus Promicromonospora Krasil'nikov,Kalakoutskii and Kirillova 1961a, 107AL. In Bergey'sManualof Systematic Bacteriology, vol. 4, pp. 2392–2395. Edited by S.T. Williams, M. E. Sharpe & J. G. Holt. Baltimore: Williams & Wilkins.
  10. Kämpfer, P. & Kroppenstedt, R. M. ( 1996; ). Numerical analysis of fatty acid patterns of coryneform bacteriaand related taxa. Can J Microbiol 42, 989–1005.[CrossRef]
    [Google Scholar]
  11. Kämpfer, P. & Kroppenstedt, R. M. ( 2004; ). Pseudonocardia benzenivorans sp. nov. IntJ Syst Evol Microbiol 54, 749–751.
    [Google Scholar]
  12. Kämpfer, P., Steiof, M. & Dott, W. ( 1991; ). Microbiological characterization of a fuel-oil contaminatedsite including numerical identification of heterotrophic water and soil bacteria. Microb Ecol 21, 227–251.[CrossRef]
    [Google Scholar]
  13. Krasil'nikov, N. A., Kalakoutskii, L. V. & Kirillova,N. F. ( 1961; ). A new genus of Actinomycetales, Promicromonospora gen. nov. Bull Acad Sci USSR Ser Biol 1, 107–112.
    [Google Scholar]
  14. Ludwig, W., Strunk, O., Westram, R., Richter, L., Meier, H.,Yadhukumar, Buchner, A., Lai, T., Steppi, S. & other authors ( 2004; ). arb: a software environment for sequence data. Nucleic Acids Res 32, 1363–1371.[CrossRef]
    [Google Scholar]
  15. Minnikin, D. E., Collins, M. D. & Goodfellow, M. ( 1979; ). Fatty acid and polar lipid composition in the classificationof Cellulomonas, Oerskovia and related taxa. J Appl Bacteriol 47, 87–95.[CrossRef]
    [Google Scholar]
  16. Olsen, G. J., Matsuda, H., Hagstrom, R. & Overbeek, R. ( 1994; ). fastDNAml: a tool for construction of phylogenetictrees of DNA sequences using maximum likelihood. Comput Appl Biosci 10, 41–48.
    [Google Scholar]
  17. Prauser, H. & Falta, R. ( 1968; ).Phagensensibilität, Zellwand-Zusammensetzung und Taxonomie von Actinomyceten. Z Allg Mikrobiol 8, 39–46.[CrossRef]
    [Google Scholar]
  18. Pruesse, E., Quast, C., Knittel, K., Fuchs, B. M., Ludwig, W.,Peplies, J. & Glöckner, F. O. ( 2007; ). SILVA:a comprehensive online resource for quality checked and aligned ribosomalRNA sequence data compatible with ARB. Nucleic Acids Res 35, 7188–7196.[CrossRef]
    [Google Scholar]
  19. Salser, W. ( 1978; ). Cloning DNA sequences:a general technique for propagating eukaryotic gene sequences in bacterialcells. In Genetic Engineering, Chapter 3, pp. 53–81. Editedby A. M. Chakrabarty. West Palm Beach, FL: CRC Press.
  20. Schleifer, K. H. & Kandler, O. ( 1972; ). Peptidoglycan types of bacterial cell walls and their taxonomic implications. Bacteriol Rev 36, 407–477.
    [Google Scholar]
  21. Stackebrandt, E. & Schumann, P. ( 2004; ). Reclassification of Promicromonospora pachnodae Cazemier et al. 2004 as Xylanimicrobium pachnodae gen. nov., comb. nov. Int J Syst Evol Microbiol 54, 1383–1386.[CrossRef]
    [Google Scholar]
  22. Stackebrandt, E., Breymann, S., Steiner, U., Prauser, H., Weiss,N. & Schumann, P. ( 2002; ). Re-evaluation of thestatus of the genus Oerskovia, reclassification of Promicromonosporaenterophila (Jáger et al. 1983) as Oerskoviaenterophila comb. nov. and description of Oerskovia jenensissp. nov. and Oerskovia paurometabola sp. nov. Int J SystEvol Microbiol 52, 1105–1111.
    [Google Scholar]
  23. Takahashi, Y., Tanaka, Y., Iwai, Y. & Ōmura, S. ( 1987; ). Promicromonospora sukumoe sp. nov., a newspecies of the Actinomycetales. J Gen Appl Microbiol 33, 507–519.[CrossRef]
    [Google Scholar]
  24. Tamura, K., Dudley, J., Nei, M. & Kumar, S. ( 2007; ). mega4: Molecular evolutionary genetics analysis (mega) software version 4.0. Mol Biol Evol 24, 1596–1599.[CrossRef]
    [Google Scholar]
  25. Ziemke, F., Höfle, M. G., Lalucat, J. & Rosselló-Mora,R. ( 1998; ). Reclassification of Shewanella putrefaciens Owen'sgenomic group II as Shewanella baltica sp. nov. Int J Syst Bacteriol 48, 179–186.[CrossRef]
    [Google Scholar]
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