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Volume 59, Issue 12

sp. nov., isolated from a marine solar saltern, and transfer of Mayilraj 2005 to the genus as comb. nov. Free

Abstract

A Gram-positive to Gram-variable, motile and coccoid- or short rod-shaped bacterial strain, ISL-41, was subjected to a polyphasic study to investigate its exact taxonomic position. Strain ISL-41 grew optimally at pH 7.0–8.0 and 30 °C. It contained MK-8 and MK-7 as the predominant menaquinones and anteiso-C, iso-C, anteiso-C and C 7 alcohol as the major fatty acids. The DNA G+C content was 45.9 mol%. A phylogenetic analysis based on 16S rRNA gene sequences showed that strain ISL-41 belonged to the genus . The levels of similarity between the 16S rRNA gene sequence of strain ISL-41 and those of the type strains of recognized species and were 97.4–98.6 %. Mean DNA–DNA relatedness values between strain ISL-41 and the type strains of species and were 13–25 %. Differential phenotypic properties, together with the phylogenetic and genetic distinctiveness, showed that strain ISL-41 could be differentiated from recognized species and . On the basis of the phenotypic, phylogenetic and genetic data, strain ISL-41 is considered to represent a novel species within the genus , for which the name sp. nov. is proposed. The type strain is ISL-41 (=KCTC 13261=CCUG 56756). It is also proposed that be transferred to the genus as comb. nov. (type strain K22-03=MTCC 6226=DSM 16419=JCM 12481).

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2009-12-01
2023-03-31
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References

  1. Bruns, A., Rohde, M. & Berthe-Corti, L.(2001).Muricauda ruestringensis gen. nov., sp. nov., a facultatively anaerobic, appendaged bacterium from German North Sea intertidal sediment. Int J Syst Evol Microbiol 51, 1997–2006.[CrossRef] [Google Scholar]
  2. Cowan, S. T. & Steel, K. J.(1965). Manual for the identification of medical bacteria. London: Cambridge University Press.
  3. Dai, X., Wang, Y.-N., Wang, B.-J., Liu, S.-J. & Zhou, Y.-G.(2005).Planomicrobium chinense sp. nov., isolated from coastal sediment, and transfer of Planococcus psychrophilus and Planococcus alkanoclasticus to Planomicrobium as Planomicrobium psychrophilum comb. nov. and Planomicrobium alkanoclasticum comb. nov. Int J Syst Evol Microbiol 55, 699–702.[CrossRef] [Google Scholar]
  4. Engelhardt, M. A., Daly, K., Swannell, R. P. J. & Head, I. M.(2001). Isolation and characterization of a novel hydrocarbon-degrading, Gram-positive bacterium, isolated from intertidal sediment, and description of Planococcus alkanoclasticus sp. nov. J Appl Microbiol 90, 237–247.[CrossRef] [Google Scholar]
  5. Ezaki, T., Hashimoto, Y. & Yabuuchi, E.(1989). Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39, 224–229.[CrossRef] [Google Scholar]
  6. Junge, K., Gosink, J. J., Hoppe, H.-G. & Staley, J. T.(1998).Arthrobacter, Brachybacterium and Planococcus isolates identified from Antarctic sea ice brine. Description of Planococcus mcmeekinii sp. nov. Syst Appl Microbiol 21, 306–314.[CrossRef] [Google Scholar]
  7. Komagata, K. & Suzuki, K.(1987). Lipids and cell-wall analysis in bacterial systematics. Methods Microbiol 19, 161–203. [Google Scholar]
  8. Lányi, B.(1987). Classical and rapid identification methods for medically important bacteria. Methods Microbiol 19, 1–67. [Google Scholar]
  9. Leifson, E.(1963). Determination of carbohydrate metabolism of marine bacteria. J Bacteriol 85, 1183–1184. [Google Scholar]
  10. Mayilraj, S., Prasad, G. S., Suresh, K., Saini, H. S., Shivaji, S. & Chakrabarti, T.(2005).Planococcus stackebrandtii sp. nov., isolated from a cold desert of the Himalayas, India. Int J Syst Evol Microbiol 55, 91–94.[CrossRef] [Google Scholar]
  11. Nakagawa, Y., Sakane, T. & Yokota, A.(1996). Emendation of the genus Planococcus and transfer of Flavobacterium okeanokoites Zobell and Upham 1944 to the genus Planococcus as Planococcus okeanokoites comb. nov. Int J Syst Bacteriol 46, 866–870.[CrossRef] [Google Scholar]
  12. Reddy, G. S. N., Prakash, J. S. S., Vairamani, M., Prabhakar, S., Matsumoto, G. I. & Shivaji, S.(2002).Planococcus antarcticus and Planococcus psychrophilus spp. nov. isolated from cyanobacterial mat samples collected from ponds in Antarctica. Extremophiles 6, 253–261.[CrossRef] [Google Scholar]
  13. Sasser, M.(1990).Identification of bacteria by gas chromatography of cellular fatty acids, Technical Note no. 1. Newark, DE: MIDI.
  14. Stackebrandt, E. & Goebel, B. M.(1994). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846–849.[CrossRef] [Google Scholar]
  15. Tamaoka, J. & Komagata, K.(1984). Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol Lett 25, 125–128.[CrossRef] [Google Scholar]
  16. Wayne, L. G., Brenner, D. J., Colwell, R. R., Grimont, P. A. D., Kandler, O., Krichevsky, M. I., Moore, L. H., Moore, W. E. C., Murray, R. G. E. & other authors(1987). International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37, 463–464.[CrossRef] [Google Scholar]
  17. Yoon, J.-H., Kim, H., Kim, S.-B., Kim, H.-J., Kim, W. Y., Lee, S. T., Goodfellow, M. & Park, Y.-H.(1996). Identification of Saccharomonospora strains by the use of genomic DNA fragments and rRNA gene probes. Int J Syst Bacteriol 46, 502–505.[CrossRef] [Google Scholar]
  18. Yoon, J.-H., Lee, S. T. & Park, Y.-H.(1998). Inter- and intraspecific phylogenetic analysis of the genus Nocardioides and related taxa based on 16S rRNA gene sequences. Int J Syst Bacteriol 48, 187–194.[CrossRef] [Google Scholar]
  19. Yoon, J.-H., Kang, S.-S., Lee, K.-C., Kho, Y. H., Kang, K. H. & Park, Y.-H.(2001).Planomicrobium koreense gen. nov., sp. nov., a bacterium isolated from the Korean traditional fermented seafood jeotgal, and transfer of Planococcus okeanokoites (Nakagawa et al. 1996) and Planococcus mcmeekinii (Junge et al. 1998) to the genus Planomicrobium. Int J Syst Evol Microbiol 51, 1511–1520. [Google Scholar]
  20. Yoon, J.-H., Kang, K. H. & Park, Y.-H.(2003).Psychrobacter jeotgali sp. nov., isolated from jeotgal, a traditional Korean fermented seafood. Int J Syst Evol Microbiol 53, 449–454.[CrossRef] [Google Scholar]
  21. Zhang, D.-C., Liu, H.-C., Xin, Y.-H., Yu, Y., Zhou, P.-J. & Zhou, Y. G.(2009).Planomicrobium glaciei sp. nov., a psychrotolerant bacterium isolated from a glacier. Int J Syst Evol Microbiol 59, 1387–1390.[CrossRef] [Google Scholar]
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Planomicrobium flavidum sp. nov., isolated from a marine solar saltern, and transfer of Planococcus stackebrandtii Mayilraj et al. 2005 to the genus Planomicrobium as Planomicrobium stackebrandtii comb. nov.
Int J Syst Evol Microbiol 59, 2929 (2009); https://doi.org/10.1099/ijs.0.009191-0
/content/journal/ijsem/10.1099/ijs.0.009191-0
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