1887

Abstract

A yellow-pigmented bacterium was isolated from blood of a 3-year-old boy in Göteborg, Sweden. Comparative analysis of 16S rRNA gene sequences showed that this bacterium is most closely related to LJ96 and R2A16-10, with sequence similarity of 98.3 % to both. Strain CCUG 25036 is clearly different from CCUG 50033 and also from DSM 17673 in that DNA–DNA hybridization revealed relatedness of 33.7 and 29.8 %, respectively. Strain CCUG 25036 is further distinguished from CCUG 50033 and DSM 17673 by being able to use -mannose, -mannitol and gluconate as sole carbon sources and by lacking the ability to use maltose or sucrose as sole carbon sources. The name sp. nov. is proposed for this novel species, with the type strain CCUG 25036 (=CCM 7598). The proposal is also made to reclassify as comb. nov., with the type strain R2A16-10 (=DSM 17673 =KACC 11405).

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2009-11-01
2024-12-06
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References

  1. Johansen, J. E., Binnerup, S. J., Kroer, N. & Mølbak, L.(2005).Luteibacter rhizovicinus gen. nov., sp. nov., a yellow-pigmented gammaproteobacterium isolated from the rhizosphere of barley (Hordeum vulgare L.). Int J Syst Evol Microbiol 55, 2285–2291.[CrossRef] [Google Scholar]
  2. Jung, H.-M., Ten, L. N., Kim, K.-H., An, D. S., Im, W.-T. & Lee, S.-T.(2009).Dyella ginsengisoli sp. nov., isolated from soil of a ginseng field in South Korea. Int J Syst Evol Microbiol 59, 460–465.[CrossRef] [Google Scholar]
  3. Kämpfer, P. & Kroppenstedt, R. M.(1996). Numerical analysis of fatty acid patterns of coryneform bacteria and related taxa. Can J Microbiol 42, 989–1005.[CrossRef] [Google Scholar]
  4. Kämpfer, P., Steiof, M. & Dott, W.(1991). Microbiological characterisation of a fuel-oil contaminated site including numerical identification of heterotrophic water and soil bacteria. Microb Ecol 21, 227–251.[CrossRef] [Google Scholar]
  5. Kämpfer, P., Dreyer, U., Neef, A., Dott, W. & Busse, H.-J.(2003).Chryseobacterium defluvii sp. nov., isolated from wastewater. Int J Syst Evol Microbiol 53, 93–97.[CrossRef] [Google Scholar]
  6. Kim, B.-Y., Weon, H.-Y., Lee, K.-H., Seok, S.-J., Kwon, S.-W., Go, S.-J. & Stackebrandt, E.(2006).Dyella yeojuensis sp. nov., isolated from greenhouse soil in Korea. Int J Syst Evol Microbiol 56, 2079–2082.[CrossRef] [Google Scholar]
  7. Lane, D. J.(1991). 16S/23S rRNA sequencing nucleic acid techniques in bacterial systematics. In Nucleic Acid Techniques in Bacterial Systematics, pp 115–175. Edited by E. Stackebrandt & M. Goodfellow. New York: Wiley.
  8. Lee, D. W. & Lee, S. D.(2009).Dyella marensis sp. nov., isolated from cliff soil. Int J Syst Evol Microbiol 59, 1397–1400.[CrossRef] [Google Scholar]
  9. Ludwig, W., Strunk, O., Westram, R., Richter, L., Meier, H., Yadhukumar, Buchner, A., Lai, T., Steppi, S. & other authors(2004).arb: a software environment for sequence data. Nucleic Acids Res 32, 1363–1371.[CrossRef] [Google Scholar]
  10. Olsen, G. J., Matsuda, H., Hagström, R. & Overbeek, R.(1994). fastDNAml: a tool for construction of phylogenetic trees of DNA sequences using maximum likelihood. Comput Appl Biosci 10, 41–48. [Google Scholar]
  11. Pruesse, E., Quast, C., Knittel, K., Fuchs, B. M., Ludwig, W., Peplies, J. & Glöckner, F. O.(2007).silva: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with arb. Nucleic Acids Res 35, 7188–7196.[CrossRef] [Google Scholar]
  12. Weon, H.-Y., Anandham, R., Kim, B.-Y., Hong, S.-B., Jeon, Y.-A. & Kwon, S.-W.(2009).Dyella soli sp. nov. and Dyella terrae sp. nov., isolated from soil. Int J Syst Evol Microbiol 59, 1685–1690.[CrossRef] [Google Scholar]
  13. Ziemke, F., Höfle, M. G., Lalucat, J. & Rosselló-Mora, R.(1998). Reclassification of Shewanella putrefaciens Owen's genomic group II as Shewanella baltica sp. nov. Int J Syst Bacteriol 48, 179–186.[CrossRef] [Google Scholar]
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