A global modulatory role for the Yersinia enterocolitica H-NS protein

References

1. Balsalobre C., Juárez A., Madrid C., Mouriño M., Prenafeta A., Muñoa F. J. 1996; Complementation of the hha mutation in Escherichia coli by the ymoA gene from Yersinia enterocolitica : dependence on the gene dosage. Microbiology 142:1841–1846
   [Google Scholar]
2. Conchas R. F., Carniel E. 1990; A highly efficient electroporation system for transformation of Yersinia . Gene 87:133–137
   [Google Scholar]
3. Cornelis G. R., Colson C. 1975; Restriction of DNA in Yersinia enterocolitica detected by recipient ability for a derepressed R factor from Escherichia coli . J Gen Microbiol 87:285–291
   [Google Scholar]
4. Cornelis G. R., Sluiters C., Delor I., Gelb D., Kaninga K., Lambert de Rouvroit C., Sory M. P., Vanooteghem J. C., Michaelis T. 1991; ymoA , a Yersinia enterocolitica chromosomal gene modulating the expression of virulence functions. Mol Microbiol 5:1023–1034
   [Google Scholar]
5. De Lorenzo V., Herrero M., Jakubzik U., Timmis K. N. 1990; Mini-Tn 5 transposon derivatives for insertion mutagenesis, promoter probing, and chromosomal insertion of cloned DNA in Gram-negative eubacteria. J Bacteriol 172:6568–6572
   [Google Scholar]
6. Dorman C. J. 2004; H-NS: a universal regulator for a dynamic genome. Nat Rev Microbiol 2:391–400
   [Google Scholar]
7. Dorman C. J. 2007; H-NS, the genome sentinel. Nat Rev Microbiol 5:157–161
   [Google Scholar]
8. Dorman C. J., Deighan P. 2003; Regulation of gene expression by histone-like proteins in bacteria. Curr Opin Genet Dev 13:179–184
   [Google Scholar]
9. Ellison D. W., Miller V. L. 2006; H-NS represses inv transcription in Yersinia enterocolitica through competition with RovA and interaction with YmoA. J Bacteriol 188:5101–5112
   [Google Scholar]
10. Ellison D. W., Young B., Nelson K., Miller V. L. 2003; YmoA negatively regulates expression of invasin from Yersinia enterocolitica . J Bacteriol 185:7153–7159
    [Google Scholar]
11. Falconi M., Colonna B., Prosseda G., Micheli G., Gualerzi C. O. 1998; Thermoregulation of Shigella and Escherichia coli EIEC pathogenicity. A temperature-dependent structural transition of DNA modulates accessibility of VirF promoter to transcriptional repressor H-NS. EMBO J 17:7033–7043
    [Google Scholar]
12. Han Y., Zhou D., Pang X., Song Y., Zhang L., Bao J., Tong Z., Wang J., Guo Z. other authors 2004; Microarray analysis of temperature-induced transcriptome of Yersinia pestis . Microbiol Immunol 48:791–805
    [Google Scholar]
13. Heroven A. K., Nagel G., Tran H. J., Parr S., Dersch P. 2004; RovA is autoregulated and antagonizes H-NS-mediated silencing of invasion and rovA expression in Yersinia pseudotuberculosis . Mol Microbiol 53:871–888
    [Google Scholar]
14. Herrero M., De Lorenzo V., Timmis K. N. 1990; Transposon vectors containing non-antibiotic resistance selection markers for cloning and stable chromosomal insertion of foreign genes in gram-negative bacteria. J Bacteriol 172:6557–6567
    [Google Scholar]
15. Hoffmann A., Roeder R. G. 1991; Purification of His-tagged proteins in non-denaturing conditions suggests a convenient method for protein interaction studies. Nucleic Acids Res 19:6337–6338
    [Google Scholar]
16. Hommais F., Krin E., Laurent-Winter C., Soutourina O., Malpertuy A., Le Caer J. P., Danchin A., Bertin P. 2001; Large-scale monitoring of pleiotropic regulation of gene expression by the prokaryotic nucleoid-associated protein, H-NS. Mol Microbiol 40:20–36
    [Google Scholar]
17. Johansson J., Eriksson S., Sondén B., Wai S. N., Uhlin B. E. 2001; Heteromeric interactions among nucleoid-associated bacterial proteins: localization of StpA-stabilizing regions in H-NS of Escherichia coli . J Bacteriol 183:2343–2347
    [Google Scholar]
18. Jordi B. J., Higgins C. F. 2000; The downstream regulatory element of the proU operon of Salmonella typhimurium inhibits open complex formation by RNA polymerase at a distance. J Biol Chem 275:12123–12128
    [Google Scholar]
19. Juárez A., Hughes C., Vogel M., Goebel W. 1984; Expression and regulation of the plasmid-encoded haemolysin determinant of Escherichia coli . Mol Gen Genet 197:196–203
    [Google Scholar]
20. Lucchini S., Rowley G., Goldberg M. D., Hurd D., Harrison M., Hinton J. C. 2006; H-NS mediates the silencing of laterally acquired genes in bacteria. PLoS Pathog 2:e81
    [Google Scholar]
21. Madrid C., Nieto J. M., Paytubi S., Falconi M., Gualerzi C., Juárez A. 2002; Temperature- and H-NS-dependent regulation of a plasmid-encoded virulence operon expressing Escherichia coli hemolysin. J Bacteriol 184:5058–5066
    [Google Scholar]
22. Madrid C., Balsalobre C., García J., Juárez A. 2007a; The novel Hha/YmoA family of nucleoid-associated proteins: use of structural mimicry to modulate the activity of the H-NS family of proteins. Mol Microbiol 63:7–14
    [Google Scholar]
23. Madrid C., García J., Pons M., Juárez A. 2007b; Molecular evolution of the H-NS protein: interaction with Hha-like proteins is restricted to Enterobacteriaceae . J Bacteriol 189:265–268
    [Google Scholar]
24. Mikulskis A. V., Cornelis G. R. 1994; A new class of proteins regulating gene expression in enterobacteria. Mol Microbiol 11:77–86
    [Google Scholar]
25. Miller V. L., Mekalanos J. J. 1988; A novel suicide vector and its use in construction of insertion mutations: osmoregulation of outer membrane proteins and virulence determinants in Vibrio cholerae requires toxR . J Bacteriol 170:2575–2583
    [Google Scholar]
26. Motin V. L., Georgescu A. M., Fitch J. P., Gu P. P., Nelson D. O., Mabery S. L., Garnham J. B., Sokhansanj B. A., Ott L. L. other authors 2004; Temporal global changes in gene expression during temperature transition in Yersinia pestis . J Bacteriol 186:6298–6305
    [Google Scholar]
27. Navarre W. W., Porwollik S., Wang Y., McClelland M., Rosen H., Libby S. J., Fang F. C. 2006; Selective silencing of foreign DNA with low GC content by the H-NS protein in Salmonella . Science 313:236–238
    [Google Scholar]
28. Nieto J. M., Madrid C., Prenafeta A., Miquelay E., Balsalobre C., Carrascal M., Juárez A. 2000; Expression of the hemolysin operon in Escherichia coli is modulated by a nucleoid–protein complex that includes proteins Hha and H-NS. Mol Gen Genet 263:349–358
    [Google Scholar]
29. Nieto J. M., Madrid C., Miquelay E., Parra J. L., Rodríguez S., Juárez A. 2002; Evidence for direct protein–protein interaction between members of the enterobacterial Hha/YmoA and H-NS families of proteins. J Bacteriol 184:629–635
    [Google Scholar]
30. Noegel A., Rdest U., Goebel W. 1981; Determination of the functions of hemolytic plasmid pHly152 of Escherichia coli . J Bacteriol 145:233–247
    [Google Scholar]
31. Ono S., Goldberg M. D., Olsson T., Esposito D., Hinton J. C., Ladbury J. E. 2005; H-NS is a part of a thermally controlled mechanism for bacterial gene regulation. Biochem J 391:203–213
    [Google Scholar]
32. Paytubi S., Madrid C., Forns N., Nieto J. M., Balsalobre C., Uhlin B. E., Juárez A. 2004; YdgT, the Hha paralogue in Escherichia coli , forms heteromeric complexes with H-NS and StpA. Mol Microbiol 54:251–263
    [Google Scholar]
33. Pérez-Gutiérrez C., Llompart C. M., Skurnik M., Bengoechea J. A. 2007; Expression of the Yersinia enterocolitica pYV-encoded type III secretion system is modulated by lipopolysaccharide O-antigen status. Infect Immun 75:1512–1516
    [Google Scholar]
34. Pflum M. K. 2006; H-NS gives invading DNA the silent treatment. Nat Chem Biol 2:400–401
    [Google Scholar]
35. Poore C. A., Mobley H. L. 2003; Differential regulation of the Proteus mirabilis urease gene cluster by UreR and H-NS. Microbiology 149:3383–3394
    [Google Scholar]
36. Rimsky S. 2004; Structure of the histone-like protein H-NS and its role in regulation and genome superstructure. Curr Opin Microbiol 7:109–114
    [Google Scholar]
37. Rohde J. R., Fox J. M., Minnich S. A. 1994; Thermoregulation in Yersinia enterocolitica is coincident with changes in DNA supercoiling. Mol Microbiol 12:187–199
    [Google Scholar]
38. Simon R., Priefer U., Pühler A. 1983; A broad host range mobilization system for in vivo genetic engineering: transposon mutagenesis in gram negative bacteria. Bio/Technology 1:784–791
    [Google Scholar]
39. Sondén B., Uhlin B. E. 1996; Coordinated and differential expression of histone-like proteins in Escherichia coli : regulation and function of the H-NS analog StpA. EMBO J 15:4970–4980
    [Google Scholar]
40. Stella S., Falconi M., Lammi M., Gualerzi C. O., Pon C. L. 2006; Environmental control of the in vivo oligomerization of nucleoid protein H-NS. J Mol Biol 355:169–174
    [Google Scholar]
41. Straley S. C., Perry R. D. 1995; Environmental modulation of gene expression and pathogenesis in Yersinia . Trends Microbiol 3:310–317
    [Google Scholar]
42. Studier F. W., Rosenberg A. H., Dunn J. J., Dubendorff J. W. 1990; Use of T7 RNA polymerase to direct expression of cloned genes. Methods Enzymol 185:60–89
    [Google Scholar]
43. Tupper A. E., Owen-Hughes T. A., Ussery D. W., Santos D. S., Ferguson D. J. P., Sidebotham J. M., Hinton J. D. C., Higgins C. F. 1994; The chromatin-associated protein H-NS alters DNA topology in vitro . EMBO J 13:258–268
    [Google Scholar]
44. Williams R. M., Rimsky S., Buc H. 1996; Probing the structure, function, and interactions of the Escherichia coli H-NS and StpA proteins by using dominant negative derivatives. J Bacteriol 178:4335–4343
    [Google Scholar]
45. Williamson H. S., Free A. 2005; A truncated H-NS-like protein from enteropathogenic Escherichia coli acts as an H-NS antagonist. Mol Microbiol 55:808–827
    [Google Scholar]
46. Zhang A., Rimsky S., Reaban M. E., Buc H., Belfort M. 1996; Escherichia coli protein analogs StpA and H-NS: regulatory loops, similar and disparate effects on nucleic acid dynamics. EMBO J 15:1340–1349
    [Google Scholar]