Analysis of the Serratia marcescens proBA operon and feedback control of proline biosynthesis

References

1. Adams E., Frank L. 1980; Metabolism of proline and hydroxyproline. Annual Review of Biochemistry 49:1005–1061
   [Google Scholar]
2. Bachmann B. J., Low K. B. 1980; Linkage map of Escherichia coli K-12, edition 6. Microbiological Reviews 44:1–56
   [Google Scholar]
3. Baich A. 1969; Proline synthesis in Escherichia coli. A prolineinhibitable glutamic acid kinase. Biochimica et Biophysica Acta 192:462–467
   [Google Scholar]
4. Bolivar F., Rodriguez R. L., Greene P. J., Betlach M. C., Heynecker H. L., Boyer H. W., Crosa J. H., Falkow S. 1977; Construction and characterization of new cloning vehicles. II. A multipurpose cloning system. Gene 2:95–113
   [Google Scholar]
5. Boyer H. W., Roulland-Dussoix D. 1969; A complementation analysis of the restriction and modification of DNA in Escherichia coli . Journal of Molecular Biology 41:459–472
   [Google Scholar]
6. Brosius J., Holy A. 1984; Regulation of ribosomal RNA promoters with a synthetic lac operator. Proceedings of the National Academy of Sciences of the United States of America 816929–6933
   [Google Scholar]
7. Cassan M., Parsot C., Cohen G. N., Patte J. C. 1986; Nucleotide sequence of lysC gene encoding the lysine-sensitive aspartokinase III of Escherichia coli K12. Journal of Biological Chemistry 261:1052–1057
   [Google Scholar]
8. Chen N. Y., Hu F. M., Paulus H. 1987; Nucleotide sequence of the overlapping genes for the subunits of Bacillus subtilis aspartokinase II and their control regions. Journal of Biological Chemistry 262:8787–8798
   [Google Scholar]
9. Csonka L. N., Gelvin S. B., Goodner B. W., Orser C. S., Siemienak D., Slighton J. L. 1988; Nucleotide sequence of a mutation in the proB gene of Escherichia coli that confers proline overproduction and enhanced tolerance to osmotic stress. Gene 64:199–205
   [Google Scholar]
10. Dandekar A. M., Uratsu S. L. 1988; A single base pair change in proline biosynthesis genes causes osmotic stress tolerance. Journal of Bacteriology 170:5943–5945
    [Google Scholar]
11. Davis B. D., Mingioli E. S. 1950; Mutants of Escherichia coli requiring methionine or vitamin B₁₂. Journal of Bacteriology 60:17–28
    [Google Scholar]
12. Davis R. W., Botstein D., Roth J. R. 1980 Advanced Bacterial Genetics. A Manual for Genetic Engineerinq Cold Spring Harbor, NY: Cold Spring Harbor Laboratory;
    [Google Scholar]
13. De La Peña P., Zasloff M. 1987; Enhancement of mRNA nuclear transport by promoter elements. Cell 50:613–619
    [Google Scholar]
14. Deutch A. H., Rushlow K. E., Smith C. J. 1984; Analysis of the Escherichia coli proBA locus by DNA and protein sequencing. Nucleic Acids Research 12:6337–6355
    [Google Scholar]
15. DeVries J. K., Zubay G. 1967; DNA-directed peptide synthesis, II. The synthesis of the α-fragment of the enzyme β-galactosidase. Proceedings of the National Academy of Sciences of the United States of America 57267–287
    [Google Scholar]
16. Grothe S., Krogsrud R. L., McClellan D. J., Milner J. L., Wood J. M. 1986; Proline transport and osmotic stress response in Escherichia coli K-12. Journal of Bacteriology 166:253–259
    [Google Scholar]
17. Hawley D. K., McClure W. R. 1983; Compilation and analysis of Escherichia coli promoter DNA sequences. Nucleic Acids Research 11:2237–2255
    [Google Scholar]
18. Hayzer D. J., Leisinger T. 1980; The gene-enzyme relationships of proline biosynthesis in Escherichia coli . Journal of General Microbiology 118:287–293
    [Google Scholar]
19. Hinnebusch A. G., Fink G. R. 1983; Repeated DNA sequences upstream from HIS1 also occur at several other mm-regulated genes in Saccharomyces cerevisiae . Journal of Biological Chemistry 258:5238–5247
    [Google Scholar]
20. Katinka M., Cossart P., Sibilli L., Saint-Girons I., Chalvignac M. A., Le Bras G., Cohen G. N., Yaniv M. 1980; Nucleotide sequence of the thrA gene of Escherichia coli . Proceedings of the National Academy of Sciences of the United States of America 775730–5733
    [Google Scholar]
21. Laemmli U. K. 1970; Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature, London 227:680–685
    [Google Scholar]
22. Maniatis T., Fritsch E. F., Sambrook J. 1982 Molecular Cloning : A Laboratory Manual Cold Spring Harbor, NY: Cold Spring Harbor Laboratory;
    [Google Scholar]
23. Matsumoto H., Hosogaya S., Suzuki K., Tazaki T. 1975; Arginine gene cluster of Serratia marcescens . Japanese Journal of Microbiology 19:35–44
    [Google Scholar]
24. Miller J. 1972 Experiments in Molecular Genetics Cold Spring Harbor, NY: Cold Spring Harbor Laboratory;
    [Google Scholar]
25. Nüesch J., Schümperli D. 1984; Structural and functional organization of the gpt gene region of Escherichia coli . Gene 32:243–249
    [Google Scholar]
26. Overbeeke N., Bergmans H., Van Mansfeld F., Lugtenberg B. 1983; Complete nucleotide sequence of phoE, the structural gene for the phosphate limitation inducible outer membrane pore protein of Escherichia coli K12. Journal of Molecular Biology 163:513–532
    [Google Scholar]
27. Peoples O. P., Liebl W., Bodis M., Maeng P. J., Follettie M. T., Archer J. A., Sinskey A. J. 1988; Nucleotide sequence and fine structural analysis of the Corynebacterium glutamicum hom-thrB operon. Molecular Microbiology 2:63–72
    [Google Scholar]
28. Rafalski J. A., Falco S. C. 1988; Structure of the yeast HOM3 gene which encodes aspartokinase. Journal of Biological Chemistry 263:2146–2151
    [Google Scholar]
29. Rosenberg M., Court D. 1979; Regulatory sequences involved in the promotion and termination of RNA transcription. Annual Review of Genetics 13:319–353
    [Google Scholar]
30. Sanger F., Nicklen S., Coulson A. R. 1977; DNA sequencing with chain-terminating inhibitors. Proceedings of the National Academy of Sciences of the United States of America 745463–5467
    [Google Scholar]
31. Shapira S. K., Chou J., Richaud F. V., Casadaban M. J. 1983; New versatile plasmid vectors for expression of hybrid proteins coded by a cloned gene fused to lacZ gene sequences encoding an enzymatically active carboxy-terminal portion of β-galactosidase. Gene 25:71–82
    [Google Scholar]
32. Smith C. J., Deutch A. H., Rushlow K. E. 1984; Purification and characteristics of a γ-glutamyl kinase involved in Escherichia coli proline biosynthesis. Journal of Bacteriology 157:545–551
    [Google Scholar]
33. Stocker N. G., Fairweather N. F., Spratt B. G. 1982; Versatile low-copy-number plasmid vectors for cloning in Escherichia coli . Gene 18:335–341
    [Google Scholar]
34. Sugiura M., Imai Y., Takagi T., Kisumi M. 1985a; Improvement of a proline-producing strain of Serratia marcescens by subcloning of a mutant allele of the proline gene. Journal of Biotechnology 3:47–58
    [Google Scholar]
35. Sugiura M., Takagi T., Kisumi M. 1985b; Proline production by regulatory mutants of Serratia marcescens . Applied Microbiology and Biotechnology 21:213–219
    [Google Scholar]
36. Takagi T., Kisumi M. 1985; Isolation of a versatile Serratia marcescens mutant as a host and molecular cloning of the aspartase gene. Journal of Bacteriology 161:1–6
    [Google Scholar]
37. Takagi T., Imai Y., Sugiura M., Kisumi M. 1985; Stability and instability of a cloned mutant allele of the proline gene in Serratia marcescens. Use of a mini-F plasmid in the proline-overproducing mutant. Journal of Biotechnology 3:59–71
    [Google Scholar]
38. Takeshita S., Sato M., Toba M., Masahashi W., Hashimoto-Gotoh T. 1987; High-copy-number and low-copy-number plasmid vectors for lacZ α-complementation and chloramphenicol- or kanamycin-resistance selection. Gene 61:63–74
    [Google Scholar]
39. Yanisch-Perron C., Vieira J., Messing J. 1985; Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33:103–119
    [Google Scholar]
40. Zakin M. M., Duchange N., Ferrara P., Cohen G. N. 1983; Nucleotide sequence of the metL gene of Escherichia coli . Journal of Biological Chemistry 258:3028–3031
    [Google Scholar]