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Volume 1, Issue 2

Phylogenomics insights into order and families of Lysobacterales Open Access

Abstract

Order Lysobacterales (earlier known Xanthomonadales ) is a taxonomically complex group of a large number of gamma-proteobacteria classified in two different families, namely Lysobacteraceae and Rhodanobacteraceae . Current taxonomy is largely based on classical approaches and is devoid of whole-genome information-based analysis. In the present study, we have taken all classified and poorly described species belonging to the order Lysobacterales to perform a phylogenetic analysis based on the 16 S rRNA sequence. Moreover, to obtain robust phylogeny, we have generated whole-genome sequencing data of six type species namely Metallibacterium scheffleri , Panacagrimonas perspica , Thermomonas haemolytica , Fulvimonas soli , Pseudofulvimonas gallinarii and Rhodanobacter lindaniclasticus of the families Lysobacteraceae and Rhodanobacteraceae . Interestingly, whole-genome-based phylogenetic analysis revealed unusual positioning of the type species Pseudofulvimonas , Panacagrimonas , Metallibacterium and Aquimonas at family level. Whole-genome-based phylogeny involving 92 type strains resolved the taxonomic positioning by reshuffling the genus across families Lysobacteraceae and Rhodanobacteraceae . The present study reveals the need and scope for genome-based phylogenetic and comparative studies in order to address relationships of genera and species of order Lysobacterales .

  • Received:
  • Accepted:
  • Published Online:
Keyword(s): Lysobacterales , order , phylogenomics , taxogenomics , type species and type strains
© 2019 The Authors
  • This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
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2019-04-17
2024-04-26
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Phylogenomics insights into order and families of Lysobacterales
Access Microbiology 1, e000015 (2019); https://doi.org/10.1099/acmi.0.000015
/content/journal/acmi/10.1099/acmi.0.000015
/content/journal/acmi/10.1099/acmi.0.000015
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