1887

Abstract

Orthoreoviruses have been associated with a variety of diseases in domesticated poultry and wild-living birds. In 2002, a reovirus strain named Tvärminne avian virus (TVAV), was identified in Finland in a crow showing neurological disorders. The objective of this study was the molecular characterization of this novel reovirus strain. Genome sequencing was performed by combining semiconductor sequencing and traditional capillary sequencing. Sequence and phylogenetic analyses showed that TVAV shares low nucleotide sequence identity with other reoviruses (range for each gene, 31–72 %) including strains belonging to the species . The most closely related reovirus strain was an isolate identified in Steller sea lion. Our data indicate that TVAV is a divergent reovirus of avian origin that may be the first representative of a distinct virus species within the genus .

Loading

Article metrics loading...

/content/journal/jgv/10.1099/vir.0.060699-0
2014-04-01
2019-11-17
Loading full text...

Full text loading...

/deliver/fulltext/jgv/95/4/898.html?itemId=/content/journal/jgv/10.1099/vir.0.060699-0&mimeType=html&fmt=ahah

References

  1. Abascal F. , Zardoya R. , Telford M. J. . ( 2010; ). TranslatorX: multiple alignment of nucleotide sequences guided by amino acid translations. . Nucleic Acids Res 38: (Suppl 2), W7–W13. [CrossRef] [PubMed]
    [Google Scholar]
  2. Altschul S. F. , Gish W. , Miller W. , Myers E. W. , Lipman D. J. . ( 1990; ). Basic local alignment search tool. . J Mol Biol 215:, 403–410.[PubMed] [CrossRef]
    [Google Scholar]
  3. Attoui H. , Mertens P. P. C. , Becnel J. , Belaganahalli S. , Bergoin M. , Brussaard C. P. , Chappell J. D. , Ciarlet M. , del Vas M. . & other authors ( 2011; ). Family Reoviridae . . In Virus Taxonomy: Classification and Nomenclature of Viruses. Ninth Report of the International Committee on Taxonomy of Viruses, pp. 541–554. Edited by King A. M. Q. , Carstens E. B. , Lefkowitz E. J. . . San Diego:: Elselvier;.
    [Google Scholar]
  4. Bányai K. , Dandár E. , Dorsey K. M. , Mató T. , Palya V. . ( 2011; ). The genomic constellation of a novel avian orthoreovirus strain associated with runting-stunting syndrome in broilers. . Virus Genes 42:, 82–89. [CrossRef] [PubMed]
    [Google Scholar]
  5. Bányai K. , Borzák R. , Ihász K. , Fehér E. , Dán Á. , Jakab F. , Papp T. , Hetzel U. , Marschang R. E. , Farkas S. L. . ( 2014; ). Whole-genome sequencing of a green bush viper reovirus reveals a shared evolutionary history between reptilian and unusual mammalian orthoreoviruses. . Arch Virol 159:, 153–158. [CrossRef] [PubMed]
    [Google Scholar]
  6. Benavente J. , Martínez-Costas J. . ( 2007; ). Avian reovirus: structure and biology. . Virus Res 123:, 105–119. [CrossRef] [PubMed]
    [Google Scholar]
  7. Chappel J. D. , Duncan R. , Mertens P. P. C. , Dermody T. S. . ( 2000; ). Genus Orthoreovirus . . In Virus Taxonomy. Classification and Nomenclature of Viruses. Seventh Report of the International Committee on Taxonomy of Viruses, pp. 455–465. Edited by van Regenmortel M. H. V. , Fauquet C. M. , Bishop D. H. L. , Carstens E. B. , Estes M. K. , Lemon S. M. , Maniloff J. , Mayo M. A. , McGeoch D. J. et al. . San Diego:: Academic Press;.
    [Google Scholar]
  8. Chevreux B. , Wetter T. , Suhai S. . ( 1999; ). Genome sequence assembly using trace signals and additional sequence information. . In: Computer Science and Biology: Proceedings of the German Conference on Bioinformatics (GCB) 99, pp. 45–56.
    [Google Scholar]
  9. Chua K. B. , Crameri G. , Hyatt A. , Yu M. , Tompang M. R. , Rosli J. , McEachern J. , Crameri S. , Kumarasamy V. . & other authors ( 2007; ). A previously unknown reovirus of bat origin is associated with an acute respiratory disease in humans. . Proc Natl Acad Sci U S A 104:, 11424–11429. [CrossRef] [PubMed]
    [Google Scholar]
  10. Chua K. B. , Voon K. , Crameri G. , Tan H. S. , Rosli J. , McEachern J. A. , Suluraju S. , Yu M. , Wang L. F. . ( 2008; ). Identification and characterization of a new orthoreovirus from patients with acute respiratory infections. . PLoS ONE 3:, e3803. [CrossRef] [PubMed]
    [Google Scholar]
  11. Chua K. B. , Voon K. , Yu M. , Keniscope C. , Abdul Rasid K. , Wang L. F. . ( 2011; ). Investigation of a potential zoonotic transmission of orthoreovirus associated with acute influenza-like illness in an adult patient. . PLoS ONE 6:, e25434. [CrossRef] [PubMed]
    [Google Scholar]
  12. Dandár E. , Bálint A. , Kecskeméti S. , Szentpáli-Gavallér K. , Kisfali P. , Melegh B. , Farkas S. L. , Bányai K. . ( 2013; ). Detection and characterization of a divergent avian reovirus strain from a broiler chicken with central nervous system disease. . Arch Virol 158:, 2583–2588. [CrossRef] [PubMed]
    [Google Scholar]
  13. Day J. M. . ( 2009; ). The diversity of the orthoreoviruses: molecular taxonomy and phylogentic divides. . Infect Genet Evol 9:, 390–400. [CrossRef] [PubMed]
    [Google Scholar]
  14. Docherty D. E. , Converse K. A. , Hansen W. R. , Norman G. W. . ( 1994; ). American woodcock (Scolopax minor) mortality associated with a reovirus. . Avian Dis 38:, 899–904. [CrossRef] [PubMed]
    [Google Scholar]
  15. Duncan R. . ( 1999; ). Extensive sequence divergence and phylogenetic relationships between the fusogenic and nonfusogenic orthoreoviruses: a species proposal. . Virology 260:, 316–328. [CrossRef] [PubMed]
    [Google Scholar]
  16. Duncan R. , Murphy F. A. , Mirkovic R. R. . ( 1995; ). Characterization of a novel syncytium-inducing baboon reovirus. . Virology 212:, 752–756. [CrossRef] [PubMed]
    [Google Scholar]
  17. Duncan R. , Corcoran J. , Shou J. , Stoltz D. . ( 2004; ). Reptilian reovirus: a new fusogenic orthoreovirus species. . Virology 319:, 131–140. [CrossRef] [PubMed]
    [Google Scholar]
  18. Hollmén T. , Franson J. C. , Kilpi M. , Docherty D. E. , Hansen W. R. , Hario M. . ( 2002; ). Isolation and characterization of a reovirus from common eiders (Somateria mollissima) from Finland. . Avian Dis 46:, 478–484. [CrossRef] [PubMed]
    [Google Scholar]
  19. Huhtamo E. , Uzcátegui N. Y. , Manni T. , Munsterhjelm R. , Brummer-Korvenkontio M. , Vaheri A. , Vapalahti O. . ( 2007; ). Novel orthoreovirus from diseased crow, Finland. . Emerg Infect Dis 13:, 1967–1969. [CrossRef] [PubMed]
    [Google Scholar]
  20. Jones R. C. . ( 2000; ). Avian reovirus infections. . Rev Sci Tech 19:, 614–625.[PubMed]
    [Google Scholar]
  21. Jones R. C. . ( 2008; ). Reovirus infections. . In Diseases of Poultry, , 12th edn., pp. 309–328. Edited by Saifm Y. M. , Fadly A. M. , Glisson J. R. , McDougald L. R. , Nolan L. K. , Swayne D. E. . . Ames, Iowa:: Wiley Blackwell;.
    [Google Scholar]
  22. Lambden P. R. , Cooke S. J. , Caul E. O. , Clarke I. N. . ( 1992; ). Cloning of noncultivatable human rotavirus by single primer amplification. . J Virol 66:, 1817–1822.[PubMed]
    [Google Scholar]
  23. Mutlu O. F. , Grund C. , Cöven F. . ( 1998; ). Reovirus infection of pheasants (Phasianus colchicus). . Tierarztl Prax Ausg G Grosstiere Nutztiere 26:, 104–107.[PubMed]
    [Google Scholar]
  24. Nibert M. L. , Duncan R. . ( 2013; ). Bioinformatics of recent aqua- and orthoreovirus isolates from fish: evolutionary gain or loss of FAST and fiber proteins and taxonomic implications. . PLoS ONE 8:, e68607. [CrossRef] [PubMed]
    [Google Scholar]
  25. Nicholas K. B. , Nicholas H. B. Jr , Deerfield D. W. II . ( 1997; ). GeneDoc: analysis and visualization of genetic variation. . Embnew News 4:, 14.
    [Google Scholar]
  26. Palacios G. , Wellehan J. F. Jr , Raverty S. , Bussetti A. V. , Hui J. , Savji N. , Nollens H. H. , Lambourn D. , Celone C. . & other authors ( 2011; ). Discovery of an orthoreovirus in the aborted fetus of a Steller sea lion (Eumetopias jubatus). . J Gen Virol 92:, 2558–2565. [CrossRef] [PubMed]
    [Google Scholar]
  27. Phillips P. A. , Stanley N. F. , Walters M. N. . ( 1970; ). Murine disease induced by avian reovirus. . Aust J Exp Biol Med Sci 48:, 277–284. [CrossRef] [PubMed]
    [Google Scholar]
  28. Pritchard L. I. , Chua K. B. , Cummins D. , Hyatt A. , Crameri G. , Eaton B. T. , Wang L. F. . ( 2006; ). Pulau virus; a new member of the Nelson Bay orthoreovirus species isolated from fruit bats in Malaysia. . Arch Virol 151:, 229–239. [CrossRef] [PubMed]
    [Google Scholar]
  29. Ritter G. D. , Ley D. H. , Levy M. , Guy J. , Barnes H. J. . ( 1986; ). Intestinal cryptosporidiosis and reovirus isolation from bobwhite quail (Colinus virginianus) with enteritis. . Avian Dis 30:, 603–608. [CrossRef] [PubMed]
    [Google Scholar]
  30. Schiff L. A. , Nibert M. L. , Tyler K. L. . ( 2007; ). Orthoreoviruses and their replication. . In Fields Virology, , 5th edn., pp. 1854–1915. Edited by Knipe D. M. , Howley P. M. . . Philadelphia:: Lippincott Williams and Wilkins;.
    [Google Scholar]
  31. Tamura K. , Peterson D. , Peterson N. , Stecher G. , Nei M. , Kumar S. . ( 2011; ). MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. . Mol Biol Evol 28:, 2731–2739. [CrossRef] [PubMed]
    [Google Scholar]
  32. Thalmann C. M. , Cummins D. M. , Yu M. , Lunt R. , Pritchard L. I. , Hansson E. , Crameri S. , Hyatt A. , Wang L. F. . ( 2010; ). Broome virus, a new fusogenic Orthoreovirus species isolated from an Australian fruit bat. . Virology 402:, 26–40. [CrossRef] [PubMed]
    [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/jgv/10.1099/vir.0.060699-0
Loading
/content/journal/jgv/10.1099/vir.0.060699-0
Loading

Data & Media loading...

Supplements

Supplementary material 

PDF

Most Cited This Month

This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error