1887

Abstract

Introduction. Tobacco mosaic virus (TMV) has long been a favourite object for studies on both the structure and assembly of rod-shaped viruses. Soon after its initial purification by Stanley (1935) investigations of its structure were begun using both chemical and X-ray diffraction techniques (Bawden & Pirie, 1937; Bernal & Fankuchen, 1941). Moreover, the problems in solving such a large structure led to many developments in techniques. Since the virus has a helical structure (Watson, 1954) and forms an extremely well oriented gel rather than crystals, the three-dimensional structural information is convoluted into two dimensions because of the azimuthal disorder of the particles in the gel. Despite this difficulty, techniques have been evolved allowing the virus structure to be solved to a resolution approaching 0.4 nm (Stubbs ., 1977). The protein alone will form true crystals as one of its aggregates (the disk; see below) the structure of which has been solved to a resolution of 0.3 nm (Champness ., 1976; Bloomer ., 1978), allowing a detailed atomic model to be built.

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1984-02-01
2024-04-26
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References

  1. Asselin A., Zaitlin M. 1978; An anomalous form of tobacco mosaic virus RNA observed upon polyacrylamide gel electrophoresis. Virology 88:191–193
    [Google Scholar]
  2. Bawden F. C., Pirie N. W. 1937; The isolation and some properties of liquid crystalline substances from solanaceous plants infected with three strains of tobacco mosaic virus. Proceedings of the Royal Society B123:274–320
    [Google Scholar]
  3. Bernal J. D., Fankuchen I. 1941; X-ray and crystallographic studies of plant virus preparations. Journal of General Physiology 25:147–165
    [Google Scholar]
  4. Bloomer A. C., Champness J. N., Bricogne G., Staden R., Klug A. 1978; Protein disk of tobacco mosaic virus at 2.8 Å resolution showing the interactions within and between subunits. Nature, London 276:362–368
    [Google Scholar]
  5. Butler P. J. G. 1972; Structures and roles of the polymorphic forms of tobacco mosaic virus protein. VI. Assembly of the nucleoprotein rods of tobacco mosaic virus from the protein disks and RNA. Journal of Molecular Biology 72:25–35
    [Google Scholar]
  6. Butler P. J. G. 1974a; Structures and roles of the polymorphic forms of tobacco mosaic virus protein. IX. Initial stages of assembly of nucleoprotein rods from virus RNA and the protein disks. Journal of Molecular Biology 82:343–353
    [Google Scholar]
  7. Butler P. I. G. 1974b; Structures and roles of the polymorphic forms of tobacco mosaic virus protein. VIII. Elongation of nucleoprotein rods of the virus RNA and protein. Journal of Molecular Biology 82:333–341
    [Google Scholar]
  8. Butler P. J. G. 1976; Assembly of tobacco mosaic virus. Philosophical Transactions of the Royal Society B276:151–163
    [Google Scholar]
  9. Butler P. J. G. 1979; Assembly of regular viruses. In International Review of Biochemistry vol 25: pp 205–237 Chemistry of Macromolecules IIB Edited by Offord R. E. Baltimore: University Park Press;
    [Google Scholar]
  10. Butler P. J. G., Durham A. C. H. 1977; Tobacco mosaic virus protein aggregation and the virus assembly. Advances in Protein Chemistry 31:187–251
    [Google Scholar]
  11. Butler P. J. G., Finch J. T. 1973; Structures and roles of the polymorphic forms of tobacco mosaic virus protein. VII. Lengths of the growing rods during assembly into nucleoprotein with the viral RNA. Journal of Molecular Biology 78:637–649
    [Google Scholar]
  12. Butler P. I. G., Klug A. 1971; Assembly of the particle of tobacco mosaic virus from RNA and disks of protein. Nature New Biology 229:47–50
    [Google Scholar]
  13. Butler P. J. G., Klug A. 1973; Effect of state of polymerisation of the protein component on the assembly of tobacco mosaic virus. Molecular and General Genetics 120:91–93
    [Google Scholar]
  14. Butler P. J. G., Lomonossoff G. P. 1978; Quantized incorporation of RNA during assembly of tobacco mosaic virus from protein disks. Journal of Molecular Biology 126:877–882
    [Google Scholar]
  15. Butler P. J. G., Lomonossoff G. P. 1980; RNA-protein interactions in the assembly of tobacco mosaic virus. Biophysical Journal 32:295–312
    [Google Scholar]
  16. Butler P. J. G., Durham A. C. H., Klug A. 1972; Structures and roles of the polymorphic forms of tobacco mosaic virus protein. IV. Control of mode of aggregation of tobacco mosaic virus protein by proton binding. Journal of Molecular Biology 72:1–18
    [Google Scholar]
  17. Butler P. J. G., Bloomer A. C., Bricogne G., Champness J. N., Graham J., Guilley H., Klug A., Zimmern D. 1976; Tobacco mosaic virus assembly – specificity and the transition in protein structure during RNA packaging. Proceedings of the 3rd John Innes Symposium pp 101–110
    [Google Scholar]
  18. Butler P. J. G., Finch J. T., Zimmern D. 1977; Configuration of tobacco mosaic virus RNA during virus assembly. Nature, London 265:217–219
    [Google Scholar]
  19. Caspar D. L. D. 1963; Assembly and stability of the tobacco mosaic virus particle. Advances in Protein Chemistry 18:37–121
    [Google Scholar]
  20. Champness J. N., Bloomer A. C., Bricogne G., Butler P. J. G., Klug A. 1976; The structure of the protein disk of tobacco mosaic virus to 5 Å resolution. Nature, London 259:20–24
    [Google Scholar]
  21. Collmer C. W., Zaitlin M. 1983; The H protein isolated from tobacco mosaic virus reassociates with virions reconstituted in vitro. Virology 126:449–458
    [Google Scholar]
  22. Collmer C. W., Vogt V. M., Zaitlin M. 1983; H protein, a minor protein of TMV virions, contains sequences of the viral coat protein. Virology 126:429–448
    [Google Scholar]
  23. Durham A. C. H. 1972; Structures and roles of the polymorphic forms of tobacco mosaic virus protein. I. Sedimentation studies. Journal of Molecular Biology 67:289–305
    [Google Scholar]
  24. Durham A. C. H., Finch J. T. 1972; Structures and roles of the polymorphic forms of tobacco mosaic virus protein. II. Electron microscope observations of the larger polymers. Journal of Molecular Biology 67:307–314
    [Google Scholar]
  25. Durham A. C. H., Klug A. 1971; Polymerization of tobacco mosaic virus protein and its control. Nature New Biology 229:42–46
    [Google Scholar]
  26. Durham A. C. H., Klug A. 1972; Structures and roles of the polymorphic forms of tobacco mosaic virus protein. III. A model for the association of A-protein into disks. Journal of Molecular Biology 67:315–332
    [Google Scholar]
  27. Durham A. C. H., Finch J. T., Klug A. 1971; States of aggregation of tobacco mosaic virus protein. Nature New Biology 229:37–42
    [Google Scholar]
  28. Finch J. T. 1972; The hand of the helix of tobacco mosaic virus. Journal of Molecular Biology 66:291–294
    [Google Scholar]
  29. Fraenkel-onrat H., Singer B. 1959; Reconstitution of tobacco mosaic virus. III. Improved methods and use of mixed nucleic acids. Biochimica et biophysica acta 33:359–370
    [Google Scholar]
  30. Fraenkel-Conrat H., Singer B. 1964; Reconstitution of tobacco mosaic virus. IV. Inhibition by enzymes and other proteins, and use of polynucleotides. Virology 23:354–362
    [Google Scholar]
  31. Fraenkel-Conrat H., Williams R. C. 1955; Reconstitution of active tobacco mosaic virus from its inactive protein and nucleic acid components. Proceedings of the National Academy of Sciences, U. S. A. 41:690–698
    [Google Scholar]
  32. Fukuda M., Okada Y. 1982; Mechanism of tobacco mosaic virus assembly: role of subunit and larger aggregate protein. Proceedings of the National Academy of Sciences, U. S. A. 79:5833–5836
    [Google Scholar]
  33. Fukuda M., Ohno T., Okada Y., Otsuki Y., Takebe I. 1978; Kinetics of biphasic reconstitution of tobacco mosaic virus in vitro. Proceedings of the National Academy of Sciences, U. S. A. 75:1727–1730
    [Google Scholar]
  34. Fukuda M., Okada Y., Otsuki Y., Takebe I. 1980; The site of initiation of rod assembly on the RNA of a tomato and a cowpea strain of tobacco mosaic virus. Virology 101:493–502
    [Google Scholar]
  35. Fukuda M., Meshi T., Okada Y., Otsuki Y., Takebe I. 1981; Correlation between particle multiplication and location on virion RNA of the assembly initiation site for viruses of the tobacco mosaic virus group. Proceedings of the National Academy of Sciences, U. S. A. 78:4231–4235
    [Google Scholar]
  36. Goelet P., Karn J. 1982; Tobacco mosaic virus induces the synthesis of a family of 3′ coterminal messenger RNAs and their complements. Journal of Molecular Biology 154:541–550
    [Google Scholar]
  37. Goelet P., Lomonossoff G. P., Butler P. J. G., Akam M. E., Gait M. L., Karn J. 1982; Nucleotide sequence of tobacco mosaic virus RNA. Proceedings of the National Academy of Sciences, U. S. A. 79:5818–5822
    [Google Scholar]
  38. Graham J., Butler P. J. G. 1979; Binding of oligonucleotides to the disk of tobacco-mosaic-virus protein. European Journal of Biochemistry 93:333–337
    [Google Scholar]
  39. Guilley H., Jonard G., Richards K. E., Hirth L. 1975a; Sequence of a specifically encapsidated RNA fragment originating from the tobacco-mosaic-virus coat-protein cistron. European Journal of Biochemistry 54:135–144
    [Google Scholar]
  40. Guilley H., Jonard G., Richards K. E., Hirth L. 1975b; Observations concerning the sequence of two additional specifically encapsidated RNA fragments originating from the tobacco-mosaic-virus coat-protein cistron. European Journal of Biochemistry 54:145–153
    [Google Scholar]
  41. Guilley H., Jonard G., Kukla B., Richards K. E. 1979; Sequence of 1000 nucleotides at the 3′ end of tobacco mosaic virus RNA. Nucleic Acids Research 6:1287–1308
    [Google Scholar]
  42. Hirth L., Richards K. E. 1981; Tobacco mosaic virus: model for structure and function of a simple virus. Advances in Virus Research 26:145–199
    [Google Scholar]
  43. Holmes K. C. 1979; Protein-RNA interactions during TMV assembly. Journal of Supramolecular Structure 12:305–320
    [Google Scholar]
  44. Hubert J. J., Bourque D. P., Zaitlin M. 1976; A tobacco mosaic virus mutant with non-functional coat protein and its revertant: relationship to the virus assembly process. Journal of Molecular Biology 108:789–798
    [Google Scholar]
  45. Jardetsky O., Akasaka K., Vogel D., Morris S., Holmes K. C. 1978; Unusual segmental flexibility in a region of tobacco mosaic virus coat protein. Nature, London 213:564–566
    [Google Scholar]
  46. Jonard G., Guilley H., Hirth L. 1975; Specific encapsidation of TMV RNA fragments by 25S TMV protein: isolation and some properties of the nucleoprotein complexes formed. Virology 64:1–9
    [Google Scholar]
  47. Jonard G., Richards K. E., Guilley H., Hirth L. 1977; Sequence for assembly nucleation region of TMV RNA. Cell 11:483–493
    [Google Scholar]
  48. Jonard G., Richards K., Mohier E., Gerlinger P. 1978; Nucleotide sequence at the 5′ extremity of tobacco-mosaic-virus RNA. 2. The coding region (nucleotides 69–236). European Journal of Biochemistry 84:521–531
    [Google Scholar]
  49. Kaplan I. B., Kozlov Yu. V., Pshennikova E. S., Taliansky M. E., Atabekov J. G. 1982; A Study of TMV ts mutant Ni 2519. III. Location of the reconstitution initiation sites on Ni 2519 RNA. Virology 118:317–323
    [Google Scholar]
  50. Keith J., Fraenkel-Conrat H. 1975; Tobacco mosaic virus RNA carries 5′-terminal triphosphorylated guanosine blocked by 5′-linked 7-methylguanosine. FEBS Letters 57:31–33
    [Google Scholar]
  51. Lauffer M. A. 1975 Entropy Driven Processes in Biology Berlin & New York: Springer-Verlag;
    [Google Scholar]
  52. Lebeurier G., Hirth L. 1973; Tobacco mosaic virus reconstitution at low ionic strength. FEBS Letters 34:19–lpage23
    [Google Scholar]
  53. Lebeurier G., Nicolaieff A., Richards K. E. 1977; Inside-out model for self-assembly of tobacco mosaic virus. Proceedings of the National Academy of Sciences, U. S. A. 74:149–153
    [Google Scholar]
  54. Lomonossoff G. P., Butler P. J. G. 1979; Location and encapsidation of the coat protein cistron of tobacco mosaic virus. A bidirectional elongation of the nucleoprotein rod. European Journal of Biochemistry 93:157–164
    [Google Scholar]
  55. Lomonossoff G. P., Butler P. J. G. 1980; Assembly of tobacco mosaic virus: elongation towards the 3′-hydroxyl terminus of the RNA. FEBS Letters 113:271–274
    [Google Scholar]
  56. Mandelkow E., Holmes K. C., Gallwitz U. 1976; A new helical aggregate of tobacco mosaic virus protein. Journal of Molecular Biology 102:265–285
    [Google Scholar]
  57. Mandelkow E., Stubbs G., Warren S. 1981; Structures of the helical aggregates of tobacco mosaic virus protein. Journal of Molecular Biology 152:375–386
    [Google Scholar]
  58. Meshi T., Ohno T., Okada Y. 1982; Nucleotide sequence and its character of cistron coding for the 30K protein of tobacco mosaic virus (OM strain). Journal of Biochemistry (Japan) 91:1441–1444
    [Google Scholar]
  59. Meshi T., Kiyama R., Ohno T., Okada Y. 1983; Nucleotide sequence of the coat protein cistron and the 3′ noncoding region of cucumber green mottle mosaic virus (watermelon strain) RNA. Virology 127:54–64
    [Google Scholar]
  60. Novikov V. K., Sarukhan-Bek K. K., Atabekov J. G. 1974; Anomalous stable aggregates in mixture of TMV and cucumber virus 3 proteins. Virology 62:134–144
    [Google Scholar]
  61. Ohno T., Inoue H., Okada Y. 1972; Assembly of rod-shaped virus in vitro: reconstitution with cucumber green mottle mosaic virus protein and tobacco mosaic virus RNA. Proceedings of the National Academy of Sciences U. S. A. 69:3680–3683
    [Google Scholar]
  62. Ohno T., Okada Y., Shimotohno K., Miura K., Shinshi H., Miura M., Sugimura T. 1976; Enzymatic removal of the 5′-terminal methylated blocked structure of tobacco mosaic virus RNA and its effects on infectivity and reconstitution with coat protein. FEBS Letters 67:209–213
    [Google Scholar]
  63. Ohno T., Takahashi M., Okada Y. 1977; Assembly of tobacco mosaic virus in vitro: elongation of partially reconstituted RNA. Proceedings of the National Academy of Sciences, U. S. A. 74:552–555
    [Google Scholar]
  64. Okada Y., Ohno T. 1972; Assembly mechanism of tobacco mosaic virus particle from its ribonucleic acid and protein. Molecular and General Genetics 114:205–213
    [Google Scholar]
  65. Otsuki Y., Takebe I. 1978; Production of mixed coated particles in tobacco mesophyll protoplasts doubly infected by strains of tobacco mosaic virus. Virology 84:162–171
    [Google Scholar]
  66. Otsuki Y., Takebe I., Ohno T., Fukuda M., Okada Y. 1977; Reconstitution of tobacco mosaic virus rods occurs bidirectionally from an internal initiation region: demonstration by electron microscopic serology. Proceedings of the National Academy of Sciences, U. S. A. 74:1913–1917
    [Google Scholar]
  67. Perham R. N., Wilson T. M. A. 1976; The polarity of the stripping of coat protein subunits from the RNA in tobacco mosaic virus under alkaline conditions. FEBS Letters 62:11–15
    [Google Scholar]
  68. Richards K. E., Williams R. C. 1972; Assembly of tobacco mosaic virus in vitro: effect of state of polymerization of the protein component. Proceedings of the National Academy of Sciences, U. S. A. 69:1121–1124
    [Google Scholar]
  69. Richards K. E., Williams R. C. 1973; Assembly of tobacco mosaic virus in vitro. Elongation of partially assembled rods. Biochemistry 12:4574–4581
    [Google Scholar]
  70. Richards K., Guilley H., Jonard G., Hirth L. 1978; Nucleotide sequence at the 5′ extremity of tobacco- mosaic-virus RNA. 1. The noncoding region (nucleotides 1–68). European Journal of Biochemistry 84:513–519
    [Google Scholar]
  71. Sarkar S. 1960; Interaction and mixed aggregation of proteins from tobacco mosaic virus strains. Zeitschrift für Naturforschung 15b:778–786
    [Google Scholar]
  72. Schuster T. M., Scheele R. B., Khairallah L. H. 1979; Mechanism of self-assembly of tobacco mosaic virus protein. I. Nucleation-controlled kinetics of polymerization. Journal of Molecular Biology 127:461–485
    [Google Scholar]
  73. Schuster T. M., Scheele R. B., Adams M. L., Shire S. J., Steckert J. J., Potschka M. 1980; Studies on the mechanism of assembly of tobacco mosaic virus. Biophysical Journal 32:313–329
    [Google Scholar]
  74. Shire S. J., Steckert J. J., Schuster T. M. 1979a; Mechanism of self-assembly of tobacco mosaic virus protein. II. Characterization of the metastable polymerization nucleus and the initial stages of helix formation. Journal of Molecular Biology 127:487–506
    [Google Scholar]
  75. Shire S. J., Steckert J. J., Adams M. L., Schuster T. M. 1979b; Kinetics and mechanism of tobacco mosaic virus assembly: direct measurement of relative rates of incorporation of 4S and 20S protein. Proceedings of the National Academy of Sciences, U. S. A. 76:2745–2749
    [Google Scholar]
  76. Shire S. J., Steckert J. I., Schuster T. M. 1981; Mechanism of tobacco mosaic virus assembly; incorporation of 4S and 20S protein at pH 7.0 and 20 °C. Proceedings of the National Academy of Sciences, U. S. A. 78:256–260
    [Google Scholar]
  77. Stanley W. M. 1935; Isolation of a crystalline protein possessing the properties of tobacco-mosaic virus. Science 81:644–645
    [Google Scholar]
  78. Steckert J. J., Schuster T. M. 1982; Sequence specificity of trinucleoside diphosphate binding to polymerized tobacco mosaic virus protein. Nature, London 299:32–36
    [Google Scholar]
  79. Stubbs G., Stauffacher C. 1981; Structure of the RNA in tobacco mosaic virus. Journal of Molecular Biology 152:387–396
    [Google Scholar]
  80. Stubbs G., Warren S., Holmes K. 1977; Structure of RNA and RNA binding site in tobacco mosaic virus from 4-Å map calculated from X-ray fibre diagrams. Nature, London 267:216–221
    [Google Scholar]
  81. Takamatsu N., Ohno T., Meshi T., Okada Y. 1983; Molecular cloning and nucleotide sequence of the 30K and the coat protein cistron of TMV (tomato strain) genome. Nucleic Acids Research 11:3767–3778
    [Google Scholar]
  82. Taliansky M. E., Atabekova T. L., Atabekov J. G. 1977; The formation of phenotypically mixed particles upon mixed assembly of some tobacco mosaic virus (TMV) strains. Virology 76:701–708
    [Google Scholar]
  83. Taliansky M. E., Kaplan I. B., Yarvekulg L. V., Atabekova T. I., Agranovsky A. A., Atabekov J. G. 1982; A study of TMV ts mutant Ni 2519. II. Temperature sensitive behaviour of Ni 2519 RNA upon reassembly. Virology 118:309–316
    [Google Scholar]
  84. Tyulkina L. G., Nazarova G. N., Kaftanova A. S., Ledneva R. K., Bogdanov A. A., Atabekov J. G. 1975; Reassembly of TMV 20-S protein disks with 3-S RNA fragments. Virology 63:15–29
    [Google Scholar]
  85. Vogel D., De Marcillac G. D., Hirth L., Gregori E., Jaenicke R. 1979; Size distribution in the higher stages of polymerization of the A-protein of tobacco mosaic virus (Vulgare). Zeitschrift für Naturforschung 34c:782–792
    [Google Scholar]
  86. Watson J. D. 1954; The structure of tobacco mosaic virus. I. X-ray evidence of a helical arrangement of subunits around the longitudinal axis. Biochimica et biophysica acta 13:10–19
    [Google Scholar]
  87. Zelcer A., Weaber K. F., Balazs E., Zaitlin M. 1981; The detection and characterization of viral-related double-stranded RNAs in tobacco mosaic virus-infected plants. Virology 113:417–427
    [Google Scholar]
  88. Zimmern D. 1975; The 5′ end group of tobacco mosaic virus RNA is m7G5 ppp5 G. Nucleic Acids Research 2:1189–1201
    [Google Scholar]
  89. Zimmern D. 1977; The nucleotide sequence at the origin for assembly on tobacco mosaic virus RNA. Cell 11:463–482
    [Google Scholar]
  90. Zimmern D. 1983; An extended secondary structure model for the TMV assembly origin, and its correlation with protection studies and an assembly defective mutant. EMBO Journal 2:1901–1907
    [Google Scholar]
  91. Zimmern D., Butler P. J. G. 1977; The isolation of tobacco mosaic virus RNA fragments containing the origin for viral assembly. Cell 11:455–462
    [Google Scholar]
  92. Zimmern D., Hunter T. 1983; Point mutation in the 30K open reading frame of TMV implicated in temperature sensitive assembly and local lesion spreading of mutant Ni 2519. EMBO Journal 2:1893–1900
    [Google Scholar]
  93. Zimmern D., Wilson T. M. A. 1976; Location of the origin for viral reassembly on tobacco mosaic virus RNA and its relation to stable fragment. FEBS Letters 71:294–298
    [Google Scholar]
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