- Volume 93, Issue 1, 1976
Volume 93, Issue 1, 1976
- Obituary
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- Biochemistry
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CO2-fixing Enzymes in Pseudomonas fluorescens
More LessSummary: Pseudomonas fluorescens grown on glucose or glutamate at 1 or 20 °, or on acetate at 20 °, as sole carbon sources, contained both pyruvate carboxylase and phosphoenolpyruvate carboxylase. Pyruvate carboxylase was insensitive to acetylcoenzyme A and l-aspartate, and its level in cell-free extracts was markedly dependent on the carbon source for growth, the highest specific activity being attained in glucose-grown cells. Phosphoenolpyruvate carboxylase, on the other hand, although less dependent on the nature of the carbon source, showed its highest level in acetate-grown cells; the enzyme activity required acetyl-coenzyme A and was strongly inhibited by l-aspartate. The micro-organism had, in addition, a phosphoenolpyruvate carboxykinase, which showed its highest specific activity in cells grown on acetate, and a NADP-linked malate enzyme, apparently repressed by acetate and showing its highest specific activity in glutamate-grown cells.
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Some Properties of the Pyruvate Carboxylase from Pseudomonas fluorescens
More LessSummary: The pyruvate carboxylase of Pseudonomas fluorescens was purified 160-fold from cells grown on glucose at 20 °C. The activity of this purified enzyme was not affected by acetyl-coenzyme A or l-aspartate, but was strongly inhibited by ADP, which was competitive towards ATP. Pyruvate gave a broken double reciprocal plot, from which two apparent Km values could be determined, namely 0·08 and 0·21 mm, from the lower and the higher concentration ranges, respectively. The apparent K m for HCO− 3 at pH 6·9, in the presence of the manganese ATP ion (MnATP2−), was 3·1 mm. The enzyme reaction had an optimum pH value of 7·1 or 9·0, depending on the use of MnATP2− or MgATP2−, respectively, as substrate. Free Mg2+ was an activator at pH values below 9·0. The enzyme was strongly activated by monovalent cations; NH+ 4 and K+ were the better activators, with apparent Ka values of 0·7 and 1·6 mm, respectively. Partially purified enzymes from cells grown on glucose at 1 or 20 °C had the same properties, including the thermal stability. In both cases 50% of the enzyme activity was lost after preincubation for 10 min at 46 °C. The molecular weight was estimated to be about 300000 daltons by gel filtration on Sephadex G-200. The regulatory properties and molecular weight are thus similar to those determined for the pyruvate carboxylases from Pseudomonas citronellolis and Azotobacter vinelandii.
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Lability of RNA from the Large Cytoplasmic Ribosomal Subunit of the Protozoon Crithidia oncopelti
More LessSummary: Cytoplasmic ribosomal RNA extracted from Crithidia oncopelti and analysed by gel electrophoresis at 4 °C consisted of two components, with molecular weights (relative to E. coli rRNA) of 1·30 × 106 and 0·83 × 106 daltons, present in equimolar amounts. On heating briefly at 51 followed by rapid cooling, the 1·30 × 106 RNA completely dissociated into two components of molecular weights 0·70 × 106 and 0·56 × 106 (present in equimolar amounts). Fifty per cent dissociation of the molecule occurred at 28. That the integrity of the RNA molecule at low temperatures is maintained by its secondary structure was confirmed by electrophoresis under denaturing conditions (98%, v/v, formamide). To account for these phenomena, latent cleavage of the molecule in vivo is proposed.
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The Isolation, Properties and Taxonomic Relevance of Lipid-soluble, Iron-binding Compounds (the Nocobactins) from Nocardia
More LessSummary: Representative strains of the genus Nocardia, when grown on iron-deficient media, produce intracellular lipid-soluble, iron-binding compounds known as nocobactins. However, strains representing the rhodochrous taxon fail to form such compounds. The formation of the nocobactins is completely repressed in bacteria grown on iron-sufficient media. Procedures for purifying the nocobactins are described. From their various properties (u.v. and visible spectra of the ferri-and desferri-materials, mobility upon thin-layer chromatography, and dissociation patterns in HCl), they can be distinguished from the mycobactins (related compounds from mycobacteria) and divided into three main classes. The classes correspond to the three well-described species of the genus Nocardia: N. asteroides, N. brasiliensis and N. caviae. The correlation of the nocobactin data with previous results of conventional numerical taxonomy is high. Two strains of N. asteroides, however, did not produce nocobactins of the group type.
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- Genetics And Molecular Biology
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Extrachromosomal DNA in Chloramphenicol Resistant Myxococcus Strains
More LessSummary: The presence of extrachromosomal DNA in strains of Myxococcus xanthus and M. fulvus was examined by rate-zonal centrifugation of radioactively-labelled DNA in ‘cleared lysates’. All the strains examined contained extrachromosomal DNA, with the exception of M. xanthus FBt. Chloramphenicol resistance is inducible in M. xanthus FBt. A peak of extrachromosomal DNA, containing covalently closed molecules, was found in one of the induced strains, implying that induction of chloramphenicol resistance is associated with the production of a plasmid.
By incubating R+ strains of Escherichia coli with myxococci, R factor-mediated chloramphenicol resistance can be introduced into the latter. Evidence of extra chromosomal DNA in a derivative of M. xanthus with chloramphenicol resistance from R factor R1. 19 unique to the chloramphenicol strain, was obtained. By using a double-labelling technique, several chloramphenicol-resistant strains of M. fulvus M were examined. Evidence for a peak, unique for the chloramphenicol-resistant strain, was found in a strain with resistance derived from the R factor, S-a, but not from comparable strains with resistance derived from R factors R57b, R1.19 and R478.
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Derivation and Properties of F-prime Factors in Escherichia coli Carrying Nitrogen Fixation Genes from Klebsiella pneumoniae
More LessSUMMARY: A His+ Nif+ Escherichia coli K12, Hfr strain (unf43) was constructed by an intergeneric mating between a Klebsiella pneumoniae donor strain (HF3) and a His-, Hfr E. coli strain (sbi824) which transfers his as an early marker. An F-prime nif plasmid, FN39, carrying genes which correspond to the E. coli chromosomal region, metG gnd his shiA, but excluding purF and aroD, was isolated from UNF43. Translocation of carbenicillin resistance genes from a P-type R-factor, R68, to FN39 increased the stability of his and nif on the derivative F-prime, FN68.
Sedimentation analysis of both F-primes in sucrose gradients revealed four covalently closed circular(CCC) DNA species of molecular weights 279 ± 9,136 ± 3,90 ± 1 and 44 ± 1 megadaltons. It is suggested that the two smallest CCC-DNA species are component replicons of the composite F-primes of molecular weight 136 ± 3 megadaltons, and that the molecules of 279 ± 9 megadaltons are CCC-dimers.
FN68 was transferable in intergeneric matings to Klebsiella aerogenes, K. pneumoniae and Salmonella typhimurium but not to Proteus mirabilis; only carbenicillin resistance and sex factor activity were transferred to Erwinia herbicola. nif genes on FN68 were expressed in a Nif− mutant of K. pneumoniae and also in S. typhimurium, which in conventional tests is naturally non-nitrogen-fixing; expression of the his determinant of FN68 became temperature-sensitive in S. typhimurium.
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Tryptophan Biosynthesis in Coprinus lagopus: A Genetic Analysis of Mutants
More LessSummary: Thirty-one tryptophan-requiring mutants of Coprinus lagopus have been assigned by genetic and complementation analyses to four loci designated trp-1, trp-2, trp-3 and trp-4. The trp-1 and trp-3 loci were located in group III and trp-2 in group G of the linkage map. The trp-4 locus showed no linkage to the other trp loci or to markers in three additional linkage groups tested. From auxanographic tests and a study of accumulated biosynthetic intermediates, the enzymes controlled by each locus have been provisionally assigned. The trp-2 and trp-3 loci both appear necessary for anthranilate synthetase activity since mutants accumulated no intermediates. Only the trp-3 mutant could utilize anthranilic acid, therefore the trp-2 locus must also be involved in a subsequent step in the pathway. The trp-4 mutants utilized indole and accumulated anthranilic acid, and hence this locus is involved in the conversion of anthranilic acid to indoleglycerol phosphate. The trp-1 mutants utilized only tryptophan and accumulated indoleglycerol phosphate and anthranilic acid. They are therefore blocked in the final steps of the pathway catalysed by tryptophan synthetase.
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Genetic Analysis of Deletions of R1001 that are Both Transfer-deficient and Tetracycline-sensitive
More LessSummary: The extent of the deletions of five Tets Tra− mutants of R100-1 was determined by complementation experiments with wild-type and tra mutants of F lac. The presence or absence of the origin of transfer on the mutants was also investigated. Using the results, a tentative map of this region of the R factor was drawn: it was essentially similar to the analogous region of the E. coli K12 F factor, except that tet was located between traJ and traA.
Some of the deletions had removed the promoter for the transfer operon. This allowed detection of the transcription of traC and distal genes from a weak, traJ-independent promoter. This is probably the Is2 promoter, since R100-1 carries an Is2 insertion sequence located immediately to the left of traC in the correct orientation. Since neither the transfer operon promoter nor the Is2 promoter seemed to be required for transcription of traI, it was concluded that, unlike the F factor, this was located in a separate operon.
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Intra-species Transduction with Proteus mirabilis High Frequency Transducing Phages
More LessSUMMARY: The properties of three additional Proteus mirabilis hosts for the high frequency transducing (HFT) phages 5006MHFT k and 5006MHFTak are described. The phages transduce resistance to kanamycin and to ampicillin plus kanamycin, respectively, and were produced by ultraviolet induction of derivatives of P. mirabilis strain PM5006. Strain PM804 could not be shown to adsorb the phages although it yielded a few transductants. All transductants, even those produced at low multiplicities of phage input, were lysogenic and segregated markers at high frequency. Ultraviolet induced phage lysates of these transductants transduced PM804 at higher frequencies and PM5006 at lower frequencies than the original phages. Strain PM804 or its derivatives did not adsorb phage from these lysates. Transmission experiments through PM5006 of phage in the transductant lysates confirmed that PM804 had a host-controlled modification system which modified HFT phage from PM5006. That PM804 also possessed a restriction system was inferred from the greater numbers of transductants obtained with phage which bore a compatible modification pattern. Strain N and a restrictionless mutant of it named NHI, adsorbed the HFT phages avidly and failed to modify their host range. Transduction frequencies of the phage markers were about 10−4/p.f.u. adsorbed to strain NHI and only about tenfold lower to strain N which did not plate the phages. Transductants also had the features of heterogenotes and those obtained at low multiplicities of infection were non-lysogenic. The latter transductants adsorbed homologous phage while NHI transductants also plated the HFT lysates. Strain NHI, lysogenized by the parent phage 5006M, did not adsorb the HFT phages. These findings suggest that the HFT phages were most likely defective for lysogenic conversion to homologous phage non-adsorption. The postulated restriction enzymes of PM804 and strain N could not be shown to be thermolabile.
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- Short Communications
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- Taxonomy
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A Taxonomic Study of the Genus Haemophilus, with the Proposal of a New Species
More LessSummary: A collection of 426 Haemophilus strains isolated from people with infectious diseases and from the normal flora of mucous membranes in humans and various animal species was studied in an attempt to revise and improve the taxonomy of the genus Haemophilus. The examinations included the determination of a number of biochemical and physiological properties, of which several had not previously been applied to the taxonomy of haemophili. The resulting data revealed many hitherto unrecognized characters of taxonomic significance, and several of the species can now be more accurately defined. The classification presented is supported by the DNA base composition of a large number of representative strains. A diagnostic key to the different taxa is presented. Haemophilus influenzae and H. parainfluenzae have been subdivided into a number of biotypes. It is possible to demonstrate a relationship between the individual biotypes of H. influenzae and the origin of the strains assigned to them. The results indicate that H. aegyptius, H. parahaemolyticus and H. paraphrohaemolyticus do not merit specific status. Four unnamed taxa of V-factor-dependent haemophili have been recognized. The name Haemophilus segnis is proposed for one of these taxa, which consists mainly of strains isolated from the human oral cavity. It is demonstrated that the name H. ducreyi has been used for different groups of bacteria, and that only one of these groups can legitimately be assigned to the genus Haemophilus. Haemolytic V-factor-dependent strains from swine, previously included in H. parahaemolyticus, are significantly different from strains of human origin and should be named H. pleuropneumoniae. None of the strains from swine and fowls were haemindependent. The relationships of these strains to the species H. suis and H. gallinarum, and to H. parasuis and H. paragallinarum are discussed. Haemophilus piscium is shown not to belong to the genus Haemophilus. The taxonomic position of H. aphrophilus is uncertain and its possible relationship to Actinobacillus actinomycetemcomitans requires further study. The positive correlation found between the ecology of the strains studied and their affiliation with the different taxa is discussed.
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Deoxyribonucleic Acid Reassociation in the Classification of Flavobacteria
More LessSummary: DNA-DNA reassociation studies showed that Flavobacterium meningosepticum strains had a genetic relatedness of 91 to 100% with inter-strain duplexes having high thermal stabilities. The only exception, strain NCTC10016, had an average relatedness of only 43% to other strains of F. meningosepticum. The apparent divergence in DNA base sequence of this strain was reflected in the structural differences of some enzymes. There was a gradation of DNA relatedness among the Flavobacterium group II-b strains, but three strains were sufficiently related to constitute a species. Low levels of genetic relatedness were confirmed between F. meningosepticum and strains of Flavobacterium group II-b, group II-f, F. aquatile, F. breve, F. heparinum, F. pectinovorum, F. odoratum and Moraxella saccharolytica. All strains had base compositions in the range 32 to 46% guanine plus cytosine. The genome sizes of representative strains of F. meningosepticum and Flavobacterium group II-b were 2·50 × 109 to 3·52 × 109 daltons, whereas the group II-f strains had smaller genomes of 1·64 × 109 to 1·81 × 109 daltons. The taxonomic implications of these findings are discussed.
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Volumes and issues
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Volume 171 (2025)
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Volume 168 (2022)
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Volume 3 (1949)
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Volume 2 (1948)
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Volume 1 (1947)