1887
Preview this article:
Zoom in
Zoomout

Genome update: lactic acid bacteria genome sequencing is booming, Page 1 of 1

| /docserver/preview/fulltext/micro/151/12/3811-1.gif

There is no abstract available for this article.
Use the preview function to the left.

Loading

Article metrics loading...

/content/journal/micro/10.1099/mic.0.28557-0
2005-12-01
2019-11-22
Loading full text...

Full text loading...

/deliver/fulltext/micro/151/12/3811.html?itemId=/content/journal/micro/10.1099/mic.0.28557-0&mimeType=html&fmt=ahah

References

  1. Altermann, E., Russell, W. M., Azcarate-Peril, M. A. & other authors ( 2005; ). Complete genome sequence of the probiotic lactic acid bacterium Lactobacillus acidophilus NCFM. Proc Natl Acad Sci U S A 102, 3906–3912.[CrossRef]
    [Google Scholar]
  2. Boekhorst, J., Siezen, R. J., Zwahlen, M. C. & other authors ( 2004; ). The complete genomes of Lactobacillus plantarum and Lactobacillus johnsonii reveal extensive differences in chromosome organization and gene content. Microbiology 150, 3601–3611.[CrossRef]
    [Google Scholar]
  3. Bolotin, A., Wincker, P., Mauger, S., Jaillon, O., Malarme, K., Weissenbach, J., Ehrlich, S. D. & Sorokin, A. ( 2001; ). The complete genome sequence of the lactic acid bacterium Lactococcus lactis ssp. lactis IL1403. Genome Res 11, 731–753.[CrossRef]
    [Google Scholar]
  4. Bolotin, A., Quinquis, B., Renault, P. & 20 other authors ( 2004; ). Complete sequence and comparative genome analysis of the dairy bacterium Streptococcus thermophilus. Nat Biotechnol 22, 1554–1558.[CrossRef]
    [Google Scholar]
  5. Francke, C., Siezen, R. J. & Teusink, B. ( 2005; ). Reconstructing the metabolic network of a bacterium from its genome. Trends Microbiol 13, 550–558.[CrossRef]
    [Google Scholar]
  6. Hols, P., Hancy, F., Fontaine, L. & 11 other authors ( 2005; ). New insights in the molecular biology and physiology of Streptococcus thermophilus revealed by comparative genomics. FEMS Microbiol Rev 29, 435–463.
    [Google Scholar]
  7. Klaenhammer, T., Altermann, E., Arigoni, F. & 21 other authors ( 2002; ). Discovering lactic acid bacteria by genomics. Antonie van Leeuwenhoek 82, 29–58.[CrossRef]
    [Google Scholar]
  8. Klaenhammer, T. R., Barrangou, R., Buck, B. L., Azcarate-Peril, M. A. & Altermann, E. ( 2005; ). Genomic features of lactic acid bacteria effecting bioprocessing and health. FEMS Microbiol Rev 29, 393–409.[CrossRef]
    [Google Scholar]
  9. Kleerebezem, M., Boekhorst, J., van Kranenburg, R. & 16 other authors ( 2003; ). Complete genome sequence of Lactobacillus plantarum WCFS1. Proc Natl Acad Sci U S A 100, 1990–1995.[CrossRef]
    [Google Scholar]
  10. Klijn, A., Mercenier, A. & Arigoni, F. ( 2005; ). Lessons from the genomes of bifidobacteria. FEMS Microbiol Rev 29, 491–509.[CrossRef]
    [Google Scholar]
  11. Molenaar, D., Bringel, F., Schuren, F. H., de Vos, W. M., Siezen, R. J. & Kleerebezem, M. ( 2005; ). Exploring Lactobacillus plantarum genome diversity by using microarrays. J Bacteriol 187, 6119–6127.[CrossRef]
    [Google Scholar]
  12. Pedersen, M. B., Iversen, S. L., Sorensen, K. I. & Johansen, E. ( 2005; ). The long and winding road from the research laboratory to industrial applications of lactic acid bacteria. FEMS Microbiol Rev 29, 611–624.[CrossRef]
    [Google Scholar]
  13. Pridmore, R. D., Berger, B., Desiere, F. & 12 other authors ( 2004; ). The genome sequence of the probiotic intestinal bacterium Lactobacillus johnsonii NCC 533. Proc Natl Acad Sci U S A 101, 2512–2517.[CrossRef]
    [Google Scholar]
  14. Saxelin, M., Tynkkynen, S., Mattila-Sandholm, T. & de Vos, W. M. ( 2005; ). Probiotic and other functional microbes: from markets to mechanisms. Curr Opin Biotechnol 16, 204–211.[CrossRef]
    [Google Scholar]
  15. Schell, M. A., Karmirantzou, M., Snel, B. & 9 other authors ( 2002; ). The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract. Proc Natl Acad Sci U S A 99, 14422–14427.[CrossRef]
    [Google Scholar]
  16. Siezen, R. J., van Enckevort, F. H., Kleerebezem, M. & Teusink, B. ( 2004; ). Genome data mining of lactic acid bacteria: the impact of bioinformatics. Curr Opin Biotechnol 15, 105–115.[CrossRef]
    [Google Scholar]
  17. Siezen, R. J., Renckens, B., van Swam, I., Peters, S., van Kranenburg, R., Kleerebezem, M. & de Vos, W. M. ( 2005; ). Complete sequence of four plasmids of Lactococcus lactis subsp. cremoris SK11 reveals extensive adaptation to the dairy environment. Appl Environ Microbiol (in press).
    [Google Scholar]
  18. Smid, E. J., Molenaar, D., Hugenholtz, J., de Vos, W. M. & Teusink, B. ( 2005a; ). Functional ingredient production: application of global metabolic models. Curr Opin Biotechnol 16, 190–197.[CrossRef]
    [Google Scholar]
  19. Smid, E. J., van Enckevort, F. J., Wegkamp, A., Boekhorst, J., Molenaar, D., Hugenholtz, J., Siezen, R. J. & Teusink, B. ( 2005b; ). Metabolic models for rational improvement of lactic acid bacteria as cell factories. J Appl Microbiol 98, 1326–1331.[CrossRef]
    [Google Scholar]
  20. Teusink, B., van Enckevort, F. H. J., Francke, C., Wiersma, A., Wegkamp, A., Smid, E. J. & Siezen, R. J. ( 2005; ). In silico reconstruction of the metabolic pathways of Lactobacillus plantarum: comparing predictions of nutrient requirements with those from growth experiments. Appl Environ Microbiol 71, 7253–7262.[CrossRef]
    [Google Scholar]
  21. Vaughan, E. E., Heilig, H. G., Ben-Amor, K. & de Vos, W. M. ( 2005; ). Diversity, vitality and activities of intestinal lactic acid bacteria and bifidobacteria assessed by molecular approaches. FEMS Microbiol Rev 29, 477–490.[CrossRef]
    [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/micro/10.1099/mic.0.28557-0
Loading
/content/journal/micro/10.1099/mic.0.28557-0
Loading

Data & Media loading...

This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error