Did the loss of two-component systems initiate pseudogene accumulation in Mycobacterium leprae?

References

1. Akbar, S., Gaidenko, T. A., Kang, C. M. O'Reilly M., Devine, K. M. & Price, C. W. ( 2001; ). New family of regulators in the environmental signaling pathway which activates the general stress transcription factor sigma(B) of Bacillus subtilis. J Bacteriol 183, 1329–1338.[CrossRef]
   [Google Scholar]
2. Beaucher, J., Rodrigue, S., Jacques, P. E., Smith, I., Brzezinski, R. & Gaudreau, L. ( 2002; ). Novel Mycobacterium tuberculosis anti-sigma factor antagonists control σ ^F activity by distinct mechanisms. Mol Microbiol 45, 1527–1540.[CrossRef]
   [Google Scholar]
3. Boon, C. & Dick, T. ( 2002; ). Mycobacterium bovis BCG response regulator essential for hypoxic dormancy. J Bacteriol 184, 6760–6767.[CrossRef]
   [Google Scholar]
4. Chen, P., Ruiz, R. E., Li, Q., Silver, R. F. & Bishai, W. R. ( 2000; ). Construction and characterization of a Mycobacterium tuberculosis mutant lacking the alternate sigma factor gene, sigF. Infect Immun 68, 5575–5580.[CrossRef]
   [Google Scholar]
5. Cole, S. T., Brosch, R., Parkhill, J. & 39 other authors ( 1998; ). Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Nature 393, 537–544.[CrossRef]
   [Google Scholar]
6. Cole, S. T., Eiglmeier, K., Parkhill, J. & 41 other authors ( 2001; ). Massive gene decay in the leprosy bacillus. Nature 409, 1007–1011.[CrossRef]
   [Google Scholar]
7. Dasgupta, N., Kapur, V., Singh, K. K., Das, T. K., Sachdeva, S., Jyothisri, K. & Tyagi, J. S. ( 2000; ). Characterization of a two-component system, devR-devS, of Mycobacterium tuberculosis. Tuber Lung Dis 80, 141–159.[CrossRef]
   [Google Scholar]
8. Kaushal, D., Schroeder, B. G., Tyagi, S. & 8 other authors ( 2002; ). Reduced immunopathology and mortality despite tissue persistence in a Mycobacterium tuberculosis mutant lacking alternative sigma factor, SigH. Proc Natl Acad Sci U S A 99, 8330–8335.[CrossRef]
   [Google Scholar]
9. Klauck, E., Lingnau, M. & Hengge-Aronis, R. ( 2001; ). Role of the response regulator RssB in sigma recognition and initiation of sigma proteolysis in Escherichia coli. Mol Microbiol 40, 1381–1390.[CrossRef]
   [Google Scholar]
10. Madan Babu, M. ( 2003; ). Did the loss of sigma factors initiate pseudogene accumulation in M. leprae? Trends Microbiol 11, 59–61.[CrossRef]
    [Google Scholar]
11. Manganelli, R., Voskuil, M. I., Schoolnik, G. K. & Smith, I. ( 2001; ). The Mycobacterium tuberculosis ECF sigma factor sigmaE: role in global gene expression and survival in macrophages. Mol Microbiol 41, 423–437.[CrossRef]
    [Google Scholar]
12. Manganelli, R., Voskuil, M. I., Schoolnik, G. K., Dubnau, E., Gomez, M. & Smith, I. ( 2002; ). Role of the extracytoplasmic-function sigma factor sigma(H) in Mycobacterium tuberculosis global gene expression. Mol Microbiol 45, 365–374.[CrossRef]
    [Google Scholar]
13. Mayuri Bagchi, G., Das, T. K. & Tyagi, J. S. ( 2002; ). Molecular analysis of the dormancy response in Mycobacterium smegmatis: expression analysis of genes encoding the DevR-DevS two-component system, Rv3134c and chaperone alpha-crystallin homologues. FEMS Microbiol Lett 211, 231–237.
    [Google Scholar]
14. Michele, T. M., Ko, C. & Bishai, W. R. ( 1999; ). Exposure to antibiotics induces expression of the Mycobacterium tuberculosis sigF gene: implications for chemotherapy against mycobacterial persistors. Antimicrob Agents Chemother 43, 218–225.
    [Google Scholar]
15. Nizan-Koren, R., Manulis, S., Mor, H., Iraki, N. M. & Barash, I. ( 2003; ). The regulatory cascade that activates the Hrp regulon in Erwinia herbicola pv. Gypsophilae. Mol Plant Microbe Interact 16, 249–260.[CrossRef]
    [Google Scholar]
16. O'Toole, R., Smeulders, M. J., Blokpoel, M. C., Kay, E. J., Lougheed, K. & Williams, H. D. ( 2003; ). A two-component regulator of universal stress protein expression and adaptation to oxygen starvation in Mycobacterium smegmatis. J Bacteriol 185, 1543–1554.[CrossRef]
    [Google Scholar]
17. Paget, M. S., Leibovitz, E. & Buttner, M. J. ( 1999; ). A putative two-component signal transduction system regulates sigmaE, a sigma factor required for normal cell wall integrity in Streptomyces coelicolor A3(2). Mol Microbiol 33, 97–107.[CrossRef]
    [Google Scholar]
18. Park, H. D., Guinn, K. M., Harrell, M. I., Liao, R., Voskuil, M. I., Tompa, M., Schoolnik, G. K. & Sherman, D. R. ( 2003; ). Rv3133c/dosR is a transcription factor that mediates the hypoxic response of Mycobacterium tuberculosis. Mol Microbiol 48, 833–843.[CrossRef]
    [Google Scholar]
19. Raman, S., Song, T., Puyang, X., Bardarov, S., Jacobs, W. R., Jr & Husson, R. N. ( 2001; ). The alternative sigma factor SigH regulates major components of oxidative and heat stress responses in Mycobacterium tuberculosis. J Bacteriol 183, 6119–6125.[CrossRef]
    [Google Scholar]
20. Sherman, D. R., Voskuil, M., Schnappinger, D., Liao, R., Harrell, M. I. & Schoolnik, G. K. ( 2001; ). Regulation of the Mycobacterium tuberculosis hypoxia response gene encoding α-crystallin. Proc Natl Acad Sci U S A 98, 7534–7539.[CrossRef]
    [Google Scholar]
21. Wayne, L. G. & Sohaskey, C. D. ( 2001; ). Non replicating persistence of Mycobacterium tuberculosis. Annu Rev Microbiol 55, 139–163.[CrossRef]
    [Google Scholar]