1887

Abstract

The post-cytokinetic separation of cells in cell-walled organisms involves enzymic processes that degrade a specific layer of the division septum and the region of the mother cell wall that edges the septum. In the fission yeast , the 1,3-α-glucanase Agn1p, originally identified as a mutanase-like glycoside hydrolase family 71 (GH71) enzyme, dissolves the mother cell wall around the septum edge. Our search in the genomes of completely sequenced fungi identified GH71 hydrolases in Basidiomycota, Taphrinomycotina and Pezizomycotina, but not in Saccharomycotina. The most likely Agn1p orthologues in Pezizomycotina species are not mutanases having mutanase-binding domains, but experimentally non-characterized hypothetical proteins that have no carbohydrate-binding domains. The analysis of the GH71 domains corroborated the phylogenetic relationships of the species determined by previous studies, but suggested a closer relationship to the Basidiomycota proteins than to the Ascomycota proteins. In the genus, the Agn1p proteins are structurally conserved: their GH71 domains are flanked by N-terminal secretion signals and C-terminal sequences containing the conserved block YNFNA/TG. The inactivation of the gene in , the only true dimorphic member of the genus, caused a severe cell-separation defect in its yeast phase, but had no effect on the hyphal growth and yeast-to-mycelium transition. It did not affect the mycelium-to-yeast transition either, only delaying the separation of the yeast cells arising from the fragmenting hyphae. The heterologous expression of partially rescued the separation defect of the Δ cells of . The results presented indicate that the fission yeast Agn1p 1,3-α-glucanases of and share conserved functions in the yeast phase.

Funding
This study was supported by the:
  • Hungarian Scientific Research Fund (Award K101323)
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2014-06-01
2024-04-19
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References

  1. Adams D. J. ( 2004). Fungal cell wall chitinases and glucanases. Microbiology 150:2029–2035 [View Article][PubMed]
    [Google Scholar]
  2. Alonso-Nuñez M. L., An H., Martín-Cuadrado A. B., Mehta S., Petit C., Sipiczki M., del Rey F., Gould K. L., de Aldana C. R. ( 2005). Ace2p controls the expression of genes required for cell separation in Schizosaccharomyces pombe. Mol Biol Cell 16:2003–2017 [View Article][PubMed]
    [Google Scholar]
  3. Altschul S. F., Madden T. L., Schäffer A. A., Zhang J., Zhang Z., Miller W., Lipman D. J. ( 1997). Gapped blast and psi-blast: a new generation of protein database search programs. Nucleic Acids Res 25:3389–3402 [View Article][PubMed]
    [Google Scholar]
  4. Bähler J., Wu J. Q., Longtine M. S., Shah N. G., McKenzie A. III, Steever A. B., Wach A., Philippsen P., Pringle J. R. ( 1998). Heterologous modules for efficient and versatile PCR-based gene targeting in Schizosaccharomyces pombe. Yeast 14:943–951 [View Article][PubMed]
    [Google Scholar]
  5. Baladrón V., Ufano S., Dueñas E., Martín-Cuadrado A. B., del Rey F., Vázquez de Aldana C. R. ( 2002). Eng1p, an endo-1,3-β-glucanase localized at the daughter side of the septum, is involved in cell separation in Saccharomyces cerevisiae. Eukaryot Cell 1:774–786 [View Article][PubMed]
    [Google Scholar]
  6. Balazs A., Batta G., Miklos I., Acs-Szabo L., Vazquez de Aldana C. R., Sipiczki M. ( 2012). Conserved regulators of the cell separation process in Schizosaccharomyces. Fungal Genet Biol 49:235–249 [View Article][PubMed]
    [Google Scholar]
  7. Basi G., Schmid E., Maundrell K. ( 1993). TATA box mutations in the Schizosaccharomyces pombe nmt1 promoter affect transcription efficiency but not the transcription start point or thiamine repressibility. Gene 123:131–136 [View Article][PubMed]
    [Google Scholar]
  8. Batta G., Szilagyi Z., Laczik M., Sipiczki M. ( 2009). The involvement of the Schizosaccharomyces pombe sep9/spt8+ gene in the regulation of septum cleavage. FEMS Yeast Res 9:757–767 [View Article][PubMed]
    [Google Scholar]
  9. Crooks G. E., Hon G., Chandonia J. M., Brenner S. E. ( 2004). WebLogo: a sequence logo generator. Genome Res 14:1188–1190 [View Article][PubMed]
    [Google Scholar]
  10. Darriba D., Taboada G. L., Doallo R., Posada D. ( 2011). ProtTest 3: fast selection of best-fit models of protein evolution. Bioinformatics 27:1164–1165 [View Article][PubMed]
    [Google Scholar]
  11. Dekker N., Speijer D., Grün C. H., van den Berg M., de Haan A., Hochstenbach F. ( 2004). Role of the alpha-glucanase Agn1p in fission-yeast cell separation. Mol Biol Cell 15:3903–3914 [View Article][PubMed]
    [Google Scholar]
  12. Dodgson J., Brown W., Rosa C. A., Armstrong J. ( 2010). Reorganization of the growth pattern of Schizosaccharomyces pombe in invasive filament formation. Eukaryot Cell 9:1788–1797 [View Article][PubMed]
    [Google Scholar]
  13. Felsenstein J. ( 2007). phylip (phylogeny inference package), version 3.67. Department of Genome Sciences, University of Washington; Seattle, USA:
    [Google Scholar]
  14. Fuglsang C. C., Berka R. M., Wahleithner J. A., Kauppinen S., Shuster J. R., Rasmussen G., Halkier T., Dalboge H., Henrissat B. ( 2000). Biochemical analysis of recombinant fungal mutanases. A new family of α1,3-glucanases with novel carbohydrate-binding domains. J Biol Chem 275:2009–2018 [View Article][PubMed]
    [Google Scholar]
  15. Furuya K., Niki H. ( 2009). Isolation of heterothallic haploid and auxotrophic mutants of Schizosaccharomyces japonicus. Yeast 26:221–233 [View Article][PubMed]
    [Google Scholar]
  16. García I., Jiménez D., Martín V., Durán A., Sánchez Y. ( 2005). The alpha-glucanase Agn1p is required for cell separation in Schizosaccharomyces pombe. Biol Cell 97:569–576 [View Article][PubMed]
    [Google Scholar]
  17. Gilkes N. R., Henrissat B., Kilburn D. G., Miller R. C. Jr, Warren R. A. J. ( 1991). Domains in microbial beta-1, 4-glycanases: sequence conservation, function, and enzyme families. Microbiol Rev 55:303–315[PubMed]
    [Google Scholar]
  18. Guindon S., Dufayard J. F., Lefort V., Anisimova M., Hordijk W., Gascuel O. ( 2010). New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst Biol 59:307–321 [View Article][PubMed]
    [Google Scholar]
  19. Hauser P. M., Burdet F. X., Cissé O. H., Keller L., Taffé P., Sanglard D., Pagni M. ( 2010). Comparative genomics suggests that the fungal pathogen pneumocystis is an obligate parasite scavenging amino acids from its host’s lungs. PLoS ONE 5:e15152 [View Article][PubMed]
    [Google Scholar]
  20. Helston R. M., Box J. A., Tang W., Baumann P. ( 2010). Schizosaccharomyces cryophilus sp. nov., a new species of fission yeast. FEMS Yeast Res 10:779–786 [View Article][PubMed]
    [Google Scholar]
  21. Hoffman C. S., Winston F. ( 1987). A ten-minute DNA preparation from yeast efficiently releases autonomous plasmids for transformation of Escherichia coli. Gene 57:267–272 [View Article][PubMed]
    [Google Scholar]
  22. Horisberger M., Rouvet-Vauthey M. ( 1985). Cell wall architecture of the fission yeast Schizosaccharomyces pombe. Experientia 41:748–750 [View Article]
    [Google Scholar]
  23. Howell A. S., Lew D. J. ( 2012). Morphogenesis and the cell cycle. Genetics 190:51–77 [View Article][PubMed]
    [Google Scholar]
  24. Humbel B. M., Konomi M., Takagi T., Kamasawa N., Ishijima S. A., Osumi M. ( 2001). In situ localization of β-glucans in the cell wall of Schizosaccharomyces pombe. Yeast 18:433–444 [View Article][PubMed]
    [Google Scholar]
  25. Ito H., Fukuda Y., Murata K., Kimura A. ( 1983). Transformation of intact yeast cells treated with alkali cations. J Bacteriol 153:163–168[PubMed]
    [Google Scholar]
  26. James T. Y., Kauff F., Schoch C. L., Matheny P. B., Hofstetter V., Cox C. J., Celio G., Gueidan C., Fraker E. & other authors ( 2006). Reconstructing the early evolution of Fungi using a six-gene phylogeny. Nature 443:818–822 [View Article][PubMed]
    [Google Scholar]
  27. Johnson B. F., Yoo B. Y., Calleja G. B. ( 1973). Cell division in yeasts: movement of organelles associated with cell plate growth of Schizosaccharomyces pombe. J Bacteriol 115:358–366[PubMed]
    [Google Scholar]
  28. Jones D. T., Taylor W. R., Thornton J. M. ( 1992). The rapid generation of mutation data matrices from protein sequences. Comput Appl Biosci 8:275–282[PubMed]
    [Google Scholar]
  29. Katoh K., Toh H. ( 2008). Recent developments in the mafft multiple sequence alignment program. Brief Bioinform 9:286–298 [View Article][PubMed]
    [Google Scholar]
  30. Larkin M. A., Blackshields G., Brown N. P., Chenna R., McGettigan P. A., McWilliam H., Valentin F., Wallace I. M., Wilm A. & other authors ( 2007). Clustal W and Clustal X version 2.0. Bioinformatics 23:2947–2948 [View Article][PubMed]
    [Google Scholar]
  31. Martín-Cuadrado A. B., Dueñas E., Sipiczki M., Vázquez de Aldana C. R., del Rey F. ( 2003). The endo-beta-1,3-glucanase eng1p is required for dissolution of the primary septum during cell separation in Schizosaccharomyces pombe. J Cell Sci 116:1689–1698 [View Article][PubMed]
    [Google Scholar]
  32. Maundrell K. ( 1993). Thiamine-repressible expression vectors pREP and pRIP for fission yeast. Gene 123:127–130 [View Article][PubMed]
    [Google Scholar]
  33. Miklos I., Szilagyi Z., Watt S., Zilahi E., Batta G., Antunovics Z., Enczi K., Bähler J., Sipiczki M. ( 2008). Genomic expression patterns in cell separation mutants of Schizosaccharomyces pombe defective in the genes sep10+ and sep15+ coding for the Mediator subunits Med31 and Med8. Mol Genet Genomics 279:225–238 [View Article][PubMed]
    [Google Scholar]
  34. Mitchison J. M. ( 1970). Physiological and cytological methods for Schizosaccharomyces pombe. Methods Cell Physiol 4:131–165
    [Google Scholar]
  35. Mouriño-Pérez R. R. ( 2013). Septum development in filamentous ascomycetes. Fungal Biol Rev 27:1–9 [View Article]
    [Google Scholar]
  36. Nishida H., Hamamoto M., Sugiyama J. ( 2011). Draft genome sequencing of the enigmatic yeast Saitoella complicata. J Gen Appl Microbiol 57:243–246 [View Article][PubMed]
    [Google Scholar]
  37. Page R. D. M. ( 1996). TreeView: an application to display phylogenetic trees on personal computers. Comput Appl Biosci 12:357–358[PubMed]
    [Google Scholar]
  38. Petersen T. N., Brunak S., von Heijne G., Nielsen H. ( 2011). SignalP 4.0: discriminating signal peptides from transmembrane regions. Nat Methods 8:785–786 [View Article][PubMed]
    [Google Scholar]
  39. Rhind N., Chen Z., Yassour M., Thompson D. A., Haas B. J., Habib N., Wapinski I., Roy S., Lin M. F. & other authors ( 2011). Comparative functional genomics of the fission yeasts. Science 332:930–936 [View Article][PubMed]
    [Google Scholar]
  40. Ronquist F., Teslenko M., van der Mark P., Ayres D. L., Darling A., Höhna S., Larget B., Liu L., Suchard M. A., Huelsenbeck J. P. ( 2012). MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol 61:539–542 [View Article][PubMed]
    [Google Scholar]
  41. Rosling A., Cox F., Cruz-Martinez K., Ihrmark K., Grelet G.-A., Lindahl B. D., Menkis A., James T. Y. ( 2011). Archaeorhizomycetes: unearthing an ancient class of ubiquitous soil fungi. Science 333:876–879 [View Article][PubMed]
    [Google Scholar]
  42. Rustici G., Mata J., Kivinen K., Lió P., Penkett C. J., Burns G., Hayles J., Brazma A., Nurse P., Bähler J. ( 2004). Periodic gene expression program of the fission yeast cell cycle. Nat Genet 36:809–817 [View Article][PubMed]
    [Google Scholar]
  43. Sambrook J., Fritsch E. F., Maniatis T. ( 1989). Molecular Cloning: A Laboratory Manual Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press;
    [Google Scholar]
  44. Sipiczki M. ( 1995). Phylogenesis of fission yeasts. Contradictions surrounding the origin of a century old genus. Antonie van Leeuwenhoek 68:119–149 [View Article][PubMed]
    [Google Scholar]
  45. Sipiczki M. ( 2007). Splitting of the fission yeast septum. FEMS Yeast Res 7:761–770 [View Article][PubMed]
    [Google Scholar]
  46. Sipiczki M. ( 2011). Dimorphic cycle in Candida citri sp. nov., a novel yeast species isolated from rotting fruit in Borneo. FEMS Yeast Res 11:202–208 [View Article][PubMed]
    [Google Scholar]
  47. Sipiczki M., Bozsik A. ( 2000). The use of morphomutants to investigate septum formation and cell separation in Schizosaccharomyces pombe. Arch Microbiol 174:386–392 [View Article][PubMed]
    [Google Scholar]
  48. Sipiczki M., Ferenczy L. ( 1978). Enzymic methods for enrichment of fungal mutants I. Enrichment of Schizosaccharomyces pombe mutants. Mutat Res 50:163–173 [View Article]
    [Google Scholar]
  49. Sipiczki M., Takeo K., Yamaguchi M., Yoshida S., Miklos I. ( 1998). Environmentally controlled dimorphic cycle in a fission yeast. Microbiology 144:1319–1330 [View Article][PubMed]
    [Google Scholar]
  50. Sugawara T., Sato M., Takagi T., Kamasaki T., Ohno N., Osumi M. ( 2003). In situ localization of cell wall α-1,3-glucan in the fission yeast Schizosaccharomyces pombe. J Electron Microsc (Tokyo) 52:237–242 [View Article][PubMed]
    [Google Scholar]
  51. Walker L. A., Lenardon M. D., Preechasuth K., Munro C. A., Gow N. A. R. ( 2013). Cell wall stress induces alternative fungal cytokinesis and septation strategies. J Cell Sci 126:2668–2677 [View Article][PubMed]
    [Google Scholar]
  52. Walther A., Wendland J. ( 2003). Septation and cytokinesis in fungi. Fungal Genet Biol 40:187–196 [View Article][PubMed]
    [Google Scholar]
  53. Whelan S., Goldman N. ( 2001). A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach. Mol Biol Evol 18:691–699 [View Article][PubMed]
    [Google Scholar]
  54. Wloka C., Bi E. ( 2012). Mechanisms of cytokinesis in budding yeast. Cytoskeleton (Hoboken) 69:710–726 [View Article][PubMed]
    [Google Scholar]
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