Sequencing of a 65 kb region of the Bacillus subtilis genome containing the lic and cel loci, and creation of a 177 kb contig covering the gnt-sacXY region

References

1. Azevedo V., Alvarez E., Zumstein E., Damiani G., Sgaramella V., Ehrlich S. D., Serror P. 1993; An ordered collection of bacillus subtilis DNA segments cloned in yeast artificial chromosomes. Proc Natl Acad Sci USA 906047–6051
   [Google Scholar]
2. Cheng S., Chang S. -Y., Gravitt P., Respess R. 1994; Long PCR. Nature 369:684–685
   [Google Scholar]
3. Crutz A. M., Steinmetz M., Aymerich S., Richter R., Le Coq D. 1990; Induction of levansucrase in bacillus subtilis: an antitermination mechanism negatively controlled by the phosphotransferase system. J bacteriol 172:1043–1050
   [Google Scholar]
4. Débarbouillé M., Arnaud M., Fouet A., Klier A., Rapoport G. 1990; The sacT gene regulating the sacPA operon in bacillus subtilis shares strong homology with transcriptional antiterminators. J bacteriol 172:3966–3973
   [Google Scholar]
5. Demerec M., Adelberg E. A., Clark A. J., Hartman P. E. 1968; A proposal for a uniform nomenclature in bacterial genetics. J Gen Microbiol 50:1–14
   [Google Scholar]
6. Engelmann S., Lindner C., Hecker M. 1995; Cloning, nucleotide sequence, and regulation of katE encoding a σ^B dependent catalase in bacillus subtilis.. J bacteriol 177:5598–5605
   [Google Scholar]
7. Fang H., Gennis R. B. 1993; Identification of the transcriptional start site of the cyd operon from Escherichia coli.. FEMS Microbiol Lett 108:237–242
   [Google Scholar]
8. Glaser P., Kunst F., Arnaud M., Coudart M.-P., Gonzales W., Hullo M.-F., lonescu M., Lubochinsky B., Marcelino L., Moszer H., Presecan E., Santana M., Schneider E., Schweizer J., Vertes A., Rapoport G., Danchin A. 1993; Bacillus subtilis genome project: cloning and sequencing of the 97 kb region from 325° to 333°. Mol Microbiol 10:371–384
   [Google Scholar]
9. Higgins C. F., Hyde S. C., Mimmack M. M., Gileadi U., Gill D. R., Gallagher M. P. 1990; Binding protein-dependent transport systems. J bioenerg biomembr 22:571–592
   [Google Scholar]
10. Itaya M., Tanaka T. 1991; Complete physical map of the bacillus subtilis 168 chromosome constructed by a gene-directed mutagenesis method. J Mol Biol 220:631–648
    [Google Scholar]
11. Lai X., Ingram L. O. 1993; Cloning and sequencing of a cellobiose phosphotransferase system operon from bacillus stearo- thermophilus XL-65-6 and functional expression in Escherichia coli.. J bacteriol 175:6441–6450
    [Google Scholar]
12. Lonetto M. A., Brown K. L., Rudd K. E., Buttner M. J. 1994; Analysis of the Streptomyces coelicolor sigE gene reveals the existence of a subfamily of eubacterial RNA polymerase a factors involved in the regulation of extracytoplasmic functions. Proc Natl Acad Sci USA 917573–7577
    [Google Scholar]
13. Moszer I., Glaser P., Danchin A. 1995; SubtiList: a relational database for the bacillus subtilis genome. Microbiology 141:261–268
    [Google Scholar]
14. Murphy N., McConnell D. J., Cantwell B. A. 1984; The DNA sequence of the gene and genetic control sites for the excreted b. subtilis enzyme β-glucanase. Nucleic Acids Res 12:5355–5367
    [Google Scholar]
15. Ogasawara N., Nakai S., Yoshikawa H. 1994; Systematic sequencing of the 180 kilobase region of the bacillus subtilis chromosome containing the replication origin. DNA Res 1:1–14
    [Google Scholar]
16. Parker L. L., Hall B. G. 1990; Characterization and nucleotide sequence of the cryptic cel operon of Escherichia coli K12. Genetics 124:455–471
    [Google Scholar]
17. Pearson W. R., Lipman D. J. 1988; Improved tools for biological sequence comparison. Proc Natl Acad Sci USA 852444–2448
    [Google Scholar]
18. Poole R. K., Hatch L., Cleeter M. W., Gibson F., Cox G. B., Wu G. 1993; Cytochrome bd biosynthesis in Escherichia coli: the sequences of the cydC and cydD genes suggest that they encode the components of an ABC membrane transporter. Mol Microbiol 10:421–430
    [Google Scholar]
19. Reizer J., Reizer A., Saier M. H. 1990; The cellobiose permease of Escherichia coli consists of three proteins and is homologous to the lactose permease of Staphylococcus aureus.. Res Microbiol 141:1061–1067
    [Google Scholar]
20. Riley M. 1993; Functions of the gene products of Escherichia coli.. Microbiol Rev 57:862–952
    [Google Scholar]
21. Saxild H. H., Andersen L. N., Hammer K. 1996; dra-nupC-pdp operon of bacillus subtilis: nucleotide sequence, induction by deoxyribonucleosides, and transcriptional regulation by the deoR- encoded DeoR repressor protein. J bacteriol 178:424–434
    [Google Scholar]
22. Schmid S. R., Linder P. 1992; D-E-A-D protein family of putative RNA helicases. Mol Microbiol 6:283–291
    [Google Scholar]
23. Schnetz K., Stülke J., Gertz S., Krüger S., Krieg M., Hecker M., Rak B. 1996; LicT, a bacillus subtilis transcriptional anti-terminator protein of the BglG family. J bacteriol 178:1971–1979
    [Google Scholar]
24. Sorokin A., Zumstein E., Azevedo V., Ehrlich S. D., Serror P. 1993; The organization of the bacillus subtilis 168 chromosome region between the spoVA and serA genetic loci, based on sequence data. Mol Microbiol 10:385–395
    [Google Scholar]
25. Stock J. B., Ninfa A., Stock A. M. 1989; Protein phosphorylation and regulation of adaptive responses in bacteria. Microbiol Rev 53:450–490
    [Google Scholar]
26. Yoshida K., Sano H., Miwa Y., Ogasawara N., Fujita Y. 1994; Cloning and nucleotide sequencing of a 15 kb region of the bacillus subtilis genome containing the iol operon. Microbiology 140:2289–2298
    [Google Scholar]
27. Yoshida K., Sano H., Seki S., Oda M., Fujimura M., Fujita Y. 1995a; Cloning and sequencing of a 29 kb region of the Bacillus subtilis genome containing the hut and wap A loci. Microbiology 141:337–343
    [Google Scholar]
28. Yoshida K., Seki S., Fujimura M., Miwa Y., Fujita Y. 1995b; Cloning and sequencing of a 36-kb region of the Bacillus subtilis genome between the gnt and iol operons. DNA Res 2:61–69
    [Google Scholar]
29. Yoshida K., Fujimura M., Yanai N., Fujita Y. 1995c; Cloning and sequencing of a 23-kb region of the Bacillus subtilis genome between the iol and hut operons. DNA Res 2:295–301
    [Google Scholar]
30. Zeigler D. R., Dean D. H. 1990; Orientation of genes in the Bacillus subtilis chromosome. Genetics 125:703–708
    [Google Scholar]