1887

Abstract

The cloning of a gene encoding the novel phosphotriesterase from C11, which enabled it to use the organophosphate (OP) coroxon as its sole phosphorus source, is described. The gene, called (ydrolysis f oroxon) consists of 501 bp and encodes a protein of 19 kDa. This protein had no sequence similarity to any proteins in the SWISS-PROT/GenBank databases. When a spectinomycin-resistance cassette was placed in this gene, phosphotriesterase activity was abolished and C11 could no longer grow with coroxon as the sole phosphorus source. Overexpression and purification of HocA as a maltose-binding protein fusion produced a protein having a broad substrate specificity across oxon and thion OPs. Michaelis–Menten kinetics were observed with the oxon OPs, but not with the thion OPs. End-product inhibition was observed for coroxon-hydrolytic activity. Increased expression of was observed from an integrative fusion when cultures were grown in the absence of phosphate, suggesting that it might be part of the Pho regulon, but the phosphate-regulated promoter was not cloned in this study. This is believed to be the first study in which a gene required for an organism to grow with OP pesticides as a phosphorus source has been isolated.

Loading

Article metrics loading...

/content/journal/micro/10.1099/00221287-148-9-2687
2002-09-01
2024-04-16
Loading full text...

Full text loading...

/deliver/fulltext/micro/148/9/1482687a.html?itemId=/content/journal/micro/10.1099/00221287-148-9-2687&mimeType=html&fmt=ahah

References

  1. Bonnett T. C., Cobine P., Sockett R. E., McEwan A. G. 1995; Phenotypic characterization and genetic complementation of dimethylsulfoxide respiratory mutants of Rhodobacter sphaeroides and Rhodobacter capsulatus . FEMS Microbiol Lett 133:163–168 [CrossRef]
    [Google Scholar]
  2. Bowen A. R. St G., Pemberton J. M. 1985; Mercury resistance transposon Tn 813 mediates chromosome transfer in Rhodopseudomonas sphaeroides and intergeneric transfer in pBR322. In Plasmids in Bacteria pp 105–115 Edited by Helsinki D. R., Cohen S. N., Clewell D. B., Jackson D. A., Hollaender A. New York: Plenum;
    [Google Scholar]
  3. Bradford M. 1976; A rapid and sensitive method for the quantitation of microgram quantities of protein utilising the principle of protein-dye binding. Anal Biochem 72:248–254 [CrossRef]
    [Google Scholar]
  4. Bult C. J., White O., Olsen G. J. 20 other authors 1996; Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii. Science 273:1058–1073
    [Google Scholar]
  5. Burge C., Karlin S. 1997; Prediction of complete gene structures in human genomic DNA. J Mol Biol 268:78–94 [CrossRef]
    [Google Scholar]
  6. Chaudhry G. R., Ali A. N., Wheeler W. B. 1988; Isolation of a methyl parathion degrading Pseudomonas sp. that possesses DNA homologous to the opd gene from a Flavobacterium sp. Appl Environ Microbiol 54:288–293
    [Google Scholar]
  7. Cheng T.-C., Harvey S. P., Chen G. L. 1996; Cloning and expression of a gene encoding a bacterial enzyme for decontamination of organophosphorus nerve agents and nucleotide sequence of the enzyme. Appl Environ Microbiol 62:1636–1641
    [Google Scholar]
  8. Cook A. M., Daughton C. G., Alexander M. 1978; Phosphorus-containing pesticide breakdown products: quantitative utilization as phosphorus sources by bacteria. Appl Environ Microbiol 36:668–672
    [Google Scholar]
  9. Dumas D. P., Caldwell S. R., Wild J. R., Raushel F. M. 1989; Purification and properties of the phosphotriesterase from Pseudomonas diminuta . J Biol Chem 264:19659–19665
    [Google Scholar]
  10. Eraso J. M., Kaplan S. 1994; prrA , a putative response regulator involved in oxygen regulation of photosynthesis gene expression in Rhodobacter sphaeroides . J Bacteriol 176:32–43
    [Google Scholar]
  11. Folkesson A., Advani A., Sukupolvi S., Pfeifer J. D., Normark S., Lofdahl S. 1999; Multiple insertions of fimbrial operons correlate with the evolution of Salmonella serovars responsible for human disease. Mol Microbiol 33:612–622 [CrossRef]
    [Google Scholar]
  12. Gardiner A. T., MacKenzie R. C., Barrett S. J., Kaiser K., Cogdell R. G. 1996; The purple photosynthetic bacterium Rhodopseudomonas acidophila contains multiple puc peripheral antenna complex (LH2) genes: cloning and initial characterization of four α/β pairs. Photosynth Res 49:223–235 [CrossRef]
    [Google Scholar]
  13. Gill S. C., von Hippel P. H. 1989; Calculation of protein extinction coefficients from amino acid sequence data. Anal Biochem 182:319–326 [CrossRef]
    [Google Scholar]
  14. Griffith O. H., Ryan M. 1999; Bacterial phosphatidyl inositol-specific phospholipase C: structure, function and interaction with lipids. Biochim Biophys Acta 1441237–254 [CrossRef]
    [Google Scholar]
  15. Harcourt R. L., Horne I., Sutherland T. D., Hammock B. D., Russell R. J., Oakeshott J. G. 2002; Development of a simple and sensitive fluorimetric method for isolation of coumaphos-hydrolysing bacteria. Lett Appl Microbiol 34:263–268 [CrossRef]
    [Google Scholar]
  16. Horne I., Sutherland T. D., Harcourt R. L., Russell R. J., Oakeshott J. G. 2002a; Identification of an opd (organophosphate degradation) gene in an Agrobacterium isolate. Appl Environ Microbiol in press
    [Google Scholar]
  17. Horne I., Harcourt R. L., Sutherland T. D., Russell R. J., Oakeshott J. G. 2002b; Isolation of a Pseudomonas monteilli strain with a novel phosphotriesterase. FEMS Microbiol Lett 206:51–55 [CrossRef]
    [Google Scholar]
  18. Hurley J. H., Dean A. M., Sohl J. L., Koshland D. E. Jr, Stroud R. M. 1990; Regulation of an enzyme by phosphorylation at the active site. Science 249:1012–1016 [CrossRef]
    [Google Scholar]
  19. Keen N. T., Tamaki S., Kobayashi D., Trollinger D. 1988; Improved broad-host range plasmids for DNA cloning in Gram negative bacteria. Gene 70:191–197 [CrossRef]
    [Google Scholar]
  20. Kyte J., Doolittle R. F. 1982; A simple method for displaying the hydropathic character of a protein. J Mol Biol 157:105–132 [CrossRef]
    [Google Scholar]
  21. Laemmli U. K. 1970; Cleavage of structural protein during the assembly of the head of bacteriophage T4. Nature 227:680–685 [CrossRef]
    [Google Scholar]
  22. Lewis V. E., Donarski W. J., Wild J. R., Raushel F. M. 1988; Mechanism and stereochemical course at phosphorus of the reaction catalysed by a bacterial phosphotriesterase. Biochemistry 27:1591–1597 [CrossRef]
    [Google Scholar]
  23. MacBeath G., Kast P., Hilvert D. 1998; Redesigning enzyme topology by directed evolution. Science 279:1958–1961 [CrossRef]
    [Google Scholar]
  24. Machowski E. E., McAdam R. A., Derbyshire K. M., Mizrahi V. 2000; Construction and application of mycobacterial reporter transposons. Gene 253:67–75 [CrossRef]
    [Google Scholar]
  25. Mulbry W. W. 1992; The aryldialkyl phosphatase-encoding gene adpB from Nocardia sp. strain B-1: cloning, sequencing and expression in Escherichia coli . Gene 121:149–153 [CrossRef]
    [Google Scholar]
  26. Mulbry W. 2000; Characterization of a novel organophosphorus hydrolase from Nocardiodes simplex NRRL B-24074. Microbiol Res 154:285–288 [CrossRef]
    [Google Scholar]
  27. Mulbry W. W., Karns J. S. 1989; Parathion hydrolase specified by the Flavobacterium opd gene: relationship between the gene and the protein. J Bacteriol 171:6740–6746
    [Google Scholar]
  28. Penfold R. J., Pemberton J. M. 1992; An improved suicide vector for construction of chromosomal insertion mutations in bacteria. Gene 118:145–146 [CrossRef]
    [Google Scholar]
  29. Rainey F. A., Dorsch M., Morgan H. W., Stackebrandt E. 1992; 16S rDNA analysis of Spirochaeta thermophila in phylogenetic position and implications for the systematics of the order Spirochaetales. Syst Appl Microbiol 15:197–202
    [Google Scholar]
  30. Rosenberg A., Alexander M. 1979; Microbial cleavage of various organophosphorus insecticides. Appl Environ Microbiol 37:886–891
    [Google Scholar]
  31. Roth M. 1969; Fluorimetric assay of enzymes. Methods Biochem Anal 17:189–285
    [Google Scholar]
  32. Sambrook J., Fritsch E. F., Maniatis T. 1989 Molecular Cloning: a Laboratory Manual, 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory;
    [Google Scholar]
  33. Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H. 2000; Structural analysis of Arabidopsis thaliana chromosome 5. DNA Res 7:31–63 [CrossRef]
    [Google Scholar]
  34. Sethunathan N., Yoshida T. 1973; A Flavobacterium that degrades diazinon and parathion. Can J Microbiol 19:873–875 [CrossRef]
    [Google Scholar]
  35. Shelton D. R., Somich C. J. 1988; Isolation and characterization of coumaphos-metabolising bacteria from cattle-dip. Appl Environ Microbiol 54:2566–2571
    [Google Scholar]
  36. Shim H., Hong S.-B., Raushel F. M. 1998; Hydrolysis of phosphodiesters through transformation of the bacterial phosphotriesterase. J Biol Chem 273:17445–17450 [CrossRef]
    [Google Scholar]
  37. Simon R., Priefer U., Pühler A. 1983; A broad host range mobilization system for in vivo genetic engineering: transposon mutagenesis in Gram-negative bacteria. Bio/Technology 1:784–791 [CrossRef]
    [Google Scholar]
  38. Sinclair M. I., Maxwell P. C., Lyon B. R., Holloway B. W. 1986; Chromosomal location of TOL plasmid in Pseudomonas putida . J Bacteriol 168:1302–1308
    [Google Scholar]
  39. Stanier R. Y., Ingraham J. L., Wheelis M. L., Painter P. R. 1986 General Microbiology, 5th edn. Englewood Cliffs, NJ: Prentice Hall;
    [Google Scholar]
  40. Stover C. K., Pham X.-Q. T., Erwin A. L. 28 other authors 2000; Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen. Nature 406:959–964 [CrossRef]
    [Google Scholar]
  41. Sutherland T. D., Horne I., Lacey M. J., Harcourt R. L., Russell R. J., Oakeshott J. G. 2000; Enrichment of an endosulfan-degrading mixed bacterial culture. Appl Environ Microbiol 66:2822–2828 [CrossRef]
    [Google Scholar]
  42. von Tigerstrom R. G., Stelmaschuk S. 1986; Purification and characterization of the outer membrane associated alkaline phosphatase of Lysobacter enzymogenes . J Gen Microbiol 132:1379–1387
    [Google Scholar]
  43. Wanner B. L. 1983; Overlapping and separate controls of the phosphate regulon in Escherichia coli K-12. J Mol Biol 166:283–308 [CrossRef]
    [Google Scholar]
  44. Williams P. A., Murray K. A. 1974; Metabolism of benzoate and the methylbenzoates by Pseudomonas putida ( arvilla ) mt-2: evidence for the existence of a TOL plasmid. J Bacteriol 120:416–423
    [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/micro/10.1099/00221287-148-9-2687
Loading
/content/journal/micro/10.1099/00221287-148-9-2687
Loading

Data & Media loading...

This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error