1887
Preview this article:
Zoom in
Zoomout

Microarrays for microbiologists, Page 1 of 1

| /docserver/preview/fulltext/micro/147/6/1471403a-1.gif

There is no abstract available for this article.
Use the preview function to the left.

Loading

Article metrics loading...

/content/journal/micro/10.1099/00221287-147-6-1403
2001-06-01
2020-01-29
Loading full text...

Full text loading...

/deliver/fulltext/micro/147/6/1471403a.html?itemId=/content/journal/micro/10.1099/00221287-147-6-1403&mimeType=html&fmt=ahah

References

  1. Aach J., Rindone W., Church G. M.. 2000; Systematic management and analysis of yeast gene expression data. Genome Res10:431–445[CrossRef]
    [Google Scholar]
  2. Alwine J. C., Kemp D. J., Stark G. R.. 1977; Method for detection of specific RNAs in agarose gels by transfer to diazobenzyloxymethyl-paper and hybridization with DNA probes. Proc Natl Acad Sci USA74:5350–5354[CrossRef]
    [Google Scholar]
  3. Alwine J. C., Kemp D. J., Parker B. A., Reiser J., Renart J., Stark G. R., Wahl G. M.. 1979; Detection of specific RNAs or specific fragments of DNA by fractionation in gels and transfer to diazobenzyloxymethyl paper. Methods Enzymol68:220–242
    [Google Scholar]
  4. Arfin S. M., Long A. D., Ito E. T., Tolleri L., Riehle M. M., Paegle E. S., Hatfield G. W.. 2000; Global gene expression profiling in Escherichia coli K12. The effects of integration host factors. J Biol Chem275:29672–29684[CrossRef]
    [Google Scholar]
  5. Bammert G. F., Fostel J. M.. 2000; Genome-wide expression patterns in Saccharomyces cerevisiae : comparison of drug treatments and genetic alterations affecting biosynthesis of ergosterol. Antimicrob Agents Chemother44:1255–1265[CrossRef]
    [Google Scholar]
  6. Barbosa T. M., Levy S. B.. 2000; Differential expression of over 60 chromosomal genes in Escherichia coli by constitutive expression of MarA. J Bacteriol182:3467–3474[CrossRef]
    [Google Scholar]
  7. Behr M. A., Wilson M. A., Gill W. P., Salamon H., Schoolnik G. K., Rane S., Small P. M.. 1999; Comparative genomics of BCG vaccines by whole-genome DNA microarray. Science284:1520–1523[CrossRef]
    [Google Scholar]
  8. Belcher C. E., Drenkow J., Kehoe B., Gingeras T. R., McNamara N., Lemjabbar H., Basbaum C., Relman D. A.. 2000; The transcriptional responses of respiratory epithelial cells to Bordetella pertussis reveal host defensive and pathogen counter-defensive strategies. Proc Natl Acad Sci USA97:13847–13852[CrossRef]
    [Google Scholar]
  9. Bernstein B. E., Tong J. K., Schreiber S. L.. 2000; Genomewide studies of histone deacetylase function in yeast. Proc Natl Acad Sci USA97:13708–13713[CrossRef]
    [Google Scholar]
  10. Brent R.. 1999; Functional genomics: learning to think about gene expression data. Curr Biol9:R338–R341[CrossRef]
    [Google Scholar]
  11. Brocklehurst K. R., Morby A. P.. 2000; Metal-ion tolerance in Escherichia coli : analysis of transcriptional profiles by gene-array technology. Microbiology146:2277–2282
    [Google Scholar]
  12. Carpousis A. J., Vanzo N. F., Raynal L. C.. 1999; mRNA degradation – a tale of poly(A) and multiprotein machines. Trends Genet15:24–28[CrossRef]
    [Google Scholar]
  13. Cheng J., Sheldon E. L., Wu L., Uribe A., Gerrue L. O., Carrino J., Heller M. J., O’Connell J. P.. 1998; Preparation and hybridization analysis of DNA/RNA from E. coli on microfabricated bioelectronic chips. Nature Biotechnol16:541–546[CrossRef]
    [Google Scholar]
  14. Cho R. J., Campbell M. J., Winzeler E. A.. 7 other authors 1998; A genome-wide transcriptional analysis of the mitotic cell cycle. Mol Cell2:65–73[CrossRef]
    [Google Scholar]
  15. Chu S., DeRisi J., Eisen M., Mulholland J., Botstein D., Brown P. O., Herskowitz I.. 1998; The transcriptional program of sporulation in budding yeast. Science282699–705 and Erratum Science 282, 1421
    [Google Scholar]
  16. Chuang S. E., Daniels D. L., Blattner F. R.. 1993; Global regulation of gene expression in Escherichia coli. . J Bacteriol175:2026–2036
    [Google Scholar]
  17. Cohen B. A., Mitra R. D., Hughes J. D., Church G. M.. 2000a; A computational analysis of whole-genome expression data reveals chromosomal domains of gene expression. Nature Genet26:183–186[CrossRef]
    [Google Scholar]
  18. Cohen P., Bouaboula M., Bellis M., Baron V., Jbilo O., Poinot-Chazel C., Galiegue S., Hadibi E. H., Casellas P.. 2000b; Monitoring cellular responses to Listeria monocytogenes with oligonucleotide arrays. J Biol Chem275:11181–11190[CrossRef]
    [Google Scholar]
  19. Cox R. A.. 1968; The use of guanidinium chloride in the isolation of nucleic acids. Methods Enzymol12:120–129
    [Google Scholar]
  20. Cummings C. A., Relman D. A.. 2000; Using DNA microarrays to study host–microbe interactions. Emerg Infect Dis6:513–525[CrossRef]
    [Google Scholar]
  21. DeRisi J., Penland L., Brown P. O., Bittner M. L., Meltzer P. S., Ray M., Chen Y., Su Y. A., Trent J. M.. 1996; Use of a cDNA microarray to analyse gene expression patterns in human cancer. Nature Genet14:457–460[CrossRef]
    [Google Scholar]
  22. DeRisi J. L., Iyer V. R., Brown P. O.. 1997; Exploring the metabolic and genetic control of gene expression on a genomic scale. Science278:680–686[CrossRef]
    [Google Scholar]
  23. DeRisi J., Marc P., Balzi E., Brown P., Jacq C., Goffeau A., van den Hazel B.. 2000; Genome microarray analysis of transcriptional activation in multidrug resistance yeast mutants. FEBS Lett470:156–160[CrossRef]
    [Google Scholar]
  24. Dessus-Babus S., Knight S. T., Wyrick P. B.. 2000; Chlamydial infection of polarized HeLa cells induces PMN chemotaxis but the cytokine profile varies between disseminating and non-disseminating strains. Cell Microbiol2:317–327[CrossRef]
    [Google Scholar]
  25. Diehn M., Eisen M. B., Botstein D., Brown P. O.. 2000; Large-scale identification of secreted and membrane-associated gene products using DNA microarrays. Nature Genet25:58–62[CrossRef]
    [Google Scholar]
  26. Eberwine J., Yeh H., Miyashiro K., Cao Y., Nair S., Finnell R., Zettel M., Coleman P.. 1992; Analysis of gene expression in single live neurons. Proc Natl Acad Sci U SA89:3010–3014[CrossRef]
    [Google Scholar]
  27. Eckmann L., Smith J. R., Housley M. P., Dwinell M. B., Kagnoff M. F.. 2000; Analysis by high density cDNA arrays of altered gene expression in human intestinal epithelial cells in response to infection with the invasive enteric bacteria Salmonella. . J Biol Chem275:14084–14094[CrossRef]
    [Google Scholar]
  28. Eisen M. B., Spellman P. T., Brown P. O., Botstein D.. 1998; Cluster analysis and display of genome-wide expression patterns. Proc Natl Acad Sci USA95:14863–14868[CrossRef]
    [Google Scholar]
  29. Favis R., Day J. P., Gerry N. P., Phelan C., Narod S., Barany F.. 2000; Universal DNA array detection of small insertions and deletions in BRCA1 and BRCA2. Nature Biotechnol18:561–564[CrossRef]
    [Google Scholar]
  30. Ferea T. L., Botstein D., Brown P. O., Rosenzweig R. F.. 1999; Systematic changes in gene expression patterns following adaptive evolution in yeast. Proc Natl Acad Sci USA96:9721–9726[CrossRef]
    [Google Scholar]
  31. Galitski T., Saldanha A. J., Styles C. A., Lander E. S., Fink G. R.. 1999; Ploidy regulation of gene expression. Science285:251–254[CrossRef]
    [Google Scholar]
  32. Giaever G., Shoemaker D. D., Jones T. W., Liang H., Winzeler E. A., Astromoff A., Davis R. W.. 1999; Genomic profiling of drug sensitivities via induced haploinsufficiency. Nature Genet21:278–283[CrossRef]
    [Google Scholar]
  33. Gingeras T. R., Ghandour G., Wang E.. 6 other authors 1998; Simultaneous genotyping and species identification using hybridization pattern recognition analysis of generic Mycobacterium DNA arrays. Genome Res8:435–448
    [Google Scholar]
  34. Gray N. S., Wodicka L., Thunnissen A. M.. 10 other authors 1998; Exploiting chemical libraries, structure, and genomics in the search for kinase inhibitors. Science281:533–538[CrossRef]
    [Google Scholar]
  35. Groisman E. A., Ochman H.. 1997; How Salmonella became a pathogen. Trends Microbiol5:343–349[CrossRef]
    [Google Scholar]
  36. Gross C., Kelleher M., Iyer V. R., Brown P. O., Winge D. R.. 2000; Identification of the copper regulon in Saccharomyces cerevisiae by DNA microarrays. J Biol Chem275:32310–32316[CrossRef]
    [Google Scholar]
  37. Gupta R. S.. 2000; The phylogeny of proteobacteria: relationships to other eubacterial phyla and eukaryotes. FEMS Microbiol Rev24:367–402[CrossRef]
    [Google Scholar]
  38. Hautefort I., Hinton J. C.. 2000; Measurement of bacterial gene expression in vivo. Philos Trans R Soc Lond B Biol Sci355:601–611[CrossRef]
    [Google Scholar]
  39. Hemming S. A., Jansma D. B., Macgregor P. F., Goryachev A., Friesen J. D., Edwards A. M.. 2000; RNA polymerase II subunit Rpb9 regulates transcription elongation in vivo. J Biol Chem275:35506–35511[CrossRef]
    [Google Scholar]
  40. Hinton J. C.. 1997; The Escherichia coli genome sequence: the end of an era or the start of the FUN?. Mol Microbiol26:417–422[CrossRef]
    [Google Scholar]
  41. Holstege F. C., Jennings E. G., Wyrick J. J., Lee T. I., Hengartner C. J., Green M. R., Golub T. R., Lander E. S., Young R. A.. 1998; Dissecting the regulatory circuitry of a eukaryotic genome. Cell95:717–728[CrossRef]
    [Google Scholar]
  42. Hooper L. V., Wong M. H., Thelin A., Hansson L., Falk P. G., Gordon J. I.. 2001; Molecular analysis of commensal host–microbial relationships in the intestine. Science291:881–884[CrossRef]
    [Google Scholar]
  43. Hughes T. R., Marton M. J., Jones A. R.. 19 other authors 2000a; Functional discovery via a compendium of expression profiles. Cell102:109–126[CrossRef]
    [Google Scholar]
  44. Hughes T. R., Roberts C. J., Dai H.. 9 other authors 2000b; Widespread aneuploidy revealed by DNA microarray expression profiling. Nature Genet25:333–337[CrossRef]
    [Google Scholar]
  45. Ichikawa J. K., Norris A., Bangera M. G., Geiss G. K., Bumgarner R. E., Lory S., van’t Wout A. B.. 2000; Interaction of Pseudomonas aeruginosa with epithelial cells: identification of differentially regulated genes by expression microarray analysis of human cDNAs. Proc Natl Acad Sci USA97:9659–9664[CrossRef]
    [Google Scholar]
  46. Jelinsky S. A., Samson L. D.. 1999; Global response of Saccharomyces cerevisiae to an alkylating agent. Proc Natl Acad Sci USA96:1486–1491[CrossRef]
    [Google Scholar]
  47. Jia M. H., Larossa R. A., Lee J. M., Rafalski A., Derose E., Gonye G., Xue Z.. 2000; Global expression profiling of yeast treated with an inhibitor of amino acid biosynthesis, sulfometuron methyl. Physiol Genomics3:83–92
    [Google Scholar]
  48. Kell D. B., King R. D.. 2000; On the optimization of classes for the assignment of unidentified reading frames in functional genomics programmes: the need for machine learning. Trends Biotechnol18:93–98[CrossRef]
    [Google Scholar]
  49. Khodursky A. B., Peter B. J., Cozzarelli N. R., Botstein D., Brown P. O., Yanofsky C.. 2000a; DNA microarray analysis of gene expression in response to physiological and genetic changes that affect tryptophan metabolism in Escherichia coli . Proc Natl Acad Sci USA97:12170–12175[CrossRef]
    [Google Scholar]
  50. Khodursky A. B., Peter B. J., Schmidt M. B., DeRisi J., Botstein D., Brown P. O., Cozzarelli N. R.. 2000b; Analysis of topoisomerase function in bacterial replication fork movement: use of DNA microarrays. Proc Natl Acad Sci USA97:9419–9424[CrossRef]
    [Google Scholar]
  51. Kuhn K. M., DeRisi J. L., Brown P. O., Sarnow P.. 2001; Global and specific translational regulation in the genomic response of Saccharomyces cerevisiae to a rapid transfer from a fermentable to a nonfermentable carbon source. Mol Cell Biol21:916–927[CrossRef]
    [Google Scholar]
  52. Lashkari D. A., DeRisi J. L., McCusker J. H., Namath A. F., Gentile C., Hwang S. Y., Brown P. O., Davis R. W.. 1997; Yeast microarrays for genome wide parallel genetic and gene expression analysis. Proc Natl Acad Sci USA94:13057–13062[CrossRef]
    [Google Scholar]
  53. Laub M. T., McAdams T. H., Feldblyum T., Fraser C. M., Shapiro L.. 2000; Global analysis of the genetic network controlling a bacterial cell cycle. Science290:2144–2148[CrossRef]
    [Google Scholar]
  54. Lelivelt M. J., Culbertson M. R.. 1999; Yeast Upf proteins required for RNA surveillance affect global expression of the yeast transcriptome. Mol Cell Biol19:6710–6719
    [Google Scholar]
  55. Lemieux B., Aharoni A., Schena M.. 1998; Overview of DNA chip technology. Mol Breed4:277–289[CrossRef]
    [Google Scholar]
  56. ter Linde J. J., Liang H., Davis R. W., Steensma H. Y., Pronk J. T., van Dijken J. P.. 1999; Genome-wide transcriptional analysis of aerobic and anaerobic chemostat cultures of Saccharomyces cerevisiae. . J Bacteriol181:7409–7413
    [Google Scholar]
  57. Lockhart D. J., Dong H., Byrne M. C.. 8 other authors 1996; Expression monitoring by hybridization to high-density oligonucleotide arrays. Nature Biotechnol14:1675–1680[CrossRef]
    [Google Scholar]
  58. Lopez M. C., Baker H. V.. 2000; Understanding the growth phenotype of the yeast gcr1 mutant in terms of global genomic expression patterns. J Bacteriol182:4970–4978[CrossRef]
    [Google Scholar]
  59. Luo L., Salunga R. C., Guo H.. 8 other authors 1999; Gene expression profiles of laser-captured adjacent neuronal subtypes Nat Med 5. 117–22 and Erratum Nature Med 5, 355[CrossRef]
  60. Lyons T. J., Gasch A. P., Gaither L. A., Botstein D., Brown P. O., Eide D. J.. 2000; Genome-wide characterization of the Zap1p zinc-responsive regulon in yeast. Proc Natl Acad Sci USA97:7957–7962[CrossRef]
    [Google Scholar]
  61. Manger I. D., Relman D. A.. 2000; How the host ‘sees’ pathogens: global gene expression responses to infection. Curr Opin Immunol12:215–218[CrossRef]
    [Google Scholar]
  62. Maron D. M., Ames B. N.. 1983; Revised methods for the Salmonella mutagenicity test. Mutat Res113:173–215[CrossRef]
    [Google Scholar]
  63. Marton M. J., DeRisi J. L., Bennett H. A.. 11 other authors 1998; Drug target validation and identification of secondary drug target effects using DNA microarrays. Nature Med4:1293–301[CrossRef]
    [Google Scholar]
  64. Nelson K. E., Paulsen I. T., Heidelberg J. F., Fraser C. M.. 2000; Status of genome projects for nonpathogenic bacteria and archaea. Nature Biotechnol18:1049–1054[CrossRef]
    [Google Scholar]
  65. Ochman H., Lawrence J. G., Groisman E. A.. 2000; Lateral gene transfer and the nature of bacterial innovation. Nature405:299–304[CrossRef]
    [Google Scholar]
  66. Oh M. K., Liao J. C.. 2000; Gene expression profiling by DNA microarrays and metabolic fluxes in Escherichia coli. Biotechnol Prog. 16278–286[CrossRef]
  67. Pennisi E.. 2000; Microbial genomics. Culling genes early yields rich harvest. Science287:1572–1573[CrossRef]
    [Google Scholar]
  68. Posas F., Chambers J. R., Heyman J. A., Hoeffler J. P., Arino J., de Nadal E.. 2000; The transcriptional response of yeast to saline stress. J Biol Chem275:17249–17255[CrossRef]
    [Google Scholar]
  69. Primig M., Williams R. M., Winzeler E. A., Tevzadze G. G., Conway A. R., Hwang S. Y., Davis R. W., Esposito R. E.. 2000; The core meiotic transcriptome in budding yeasts. Nature Genet26:415–423[CrossRef]
    [Google Scholar]
  70. Py B., Higgins C. F., Krisch H. M., Carpousis A. J.. 1996; A DEAD-box RNA helicase in the Escherichia coli RNA degradosome. Nature381:169–172[CrossRef]
    [Google Scholar]
  71. Ren B., Robert F., Wyrick J. J.. 11 other authors 2000; Genome-wide location and function of DNA binding proteins. Science290:2306–2309[CrossRef]
    [Google Scholar]
  72. Richmond C. S., Glasner J. D., Mau R., Jin H., Blattner F. R.. 1999; Genome-wide expression profiling in Escherichia coli K-12. Nucleic Acids Res27:3821–3835[CrossRef]
    [Google Scholar]
  73. Riehle M. M., Bennett A. F., Long A. D.. 2001; Genetic architecture of thermal adaptation in Escherichia coli. . Proc Natl Acad Sci USA9:525–530
    [Google Scholar]
  74. Rimini R., Jansson B., Feger G.. 8 other authors 2000; Global analysis of transcription kinetics during competence development in Streptococcus pneumoniae using high density DNA arrays. Mol Microbiol36:1279–1292
    [Google Scholar]
  75. Rosamond J., Allsop A.. 2000; Harnessing the power of the genome in the search for new antibiotics. Science287:1973–1976[CrossRef]
    [Google Scholar]
  76. Rosenberger C. M., Scott M. G., Gold M. R., Hancock R. E., Finlay B. B.. 2000; Salmonella typhimurium infection and lipopolysaccharide stimulation induce similar changes in macrophage gene expression. J Immunol164:5894–5904[CrossRef]
    [Google Scholar]
  77. Ross-Macdonald P., Coelho P. S., Roemer T.. 15 other authors 1999; Large-scale analysis of the yeast genome by transposon tagging and gene disruption. Nature402:413–418[CrossRef]
    [Google Scholar]
  78. de Saizieu A., Gardes C., Flint N., Wagner C., Kamber M., Mitchell T. J., Keck W., Amrein K. E., Lange R.. 2000; Microarray-based identification of a novel Streptococcus pneumoniae regulon controlled by an autoinduced peptide. J Bacteriol182:4696–4703[CrossRef]
    [Google Scholar]
  79. Salama N., Guillemin K., McDaniel T. K., Sherlock G., Tompkins L., Falkow S.. 2000; A whole-genome microarray reveals genetic diversity among Helicobacter pylori strains. Proc Natl Acad Sci USA97:14668–14673[CrossRef]
    [Google Scholar]
  80. Sarkar N.. 1996; Polyadenylation of mRNA in bacteria. Microbiology142:3125–3133[CrossRef]
    [Google Scholar]
  81. Schena M., Shalon D., Davis R. W., Brown P. O.. 1995; Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science270:467–470[CrossRef]
    [Google Scholar]
  82. Shalon D., Smith S. J., Brown P. O.. 1996; A DNA microarray system for analyzing complex DNA samples using two-color fluorescent probe hybridization. Genome Res6:639–645[CrossRef]
    [Google Scholar]
  83. Southern E. M.. 1975; Detection of specific sequences among DNA fragments separated by gel electrophoresis. J Mol Biol98:503–517[CrossRef]
    [Google Scholar]
  84. Spellman P. T., Sherlock G., Zhang M. Q., Iyer V. R., Anders K., Eisen M. B., Brown P. O., Botstein D., Futcher B.. 1998; Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization. Mol Biol Cell9:3273–3297[CrossRef]
    [Google Scholar]
  85. Spradling A. C., Stern D., Beaton A., Rhem E. J., Laverty T., Mozden N., Misra S., Rubin G. M.. 1999; The Berkeley Drosophila Genome Project gene disruption project: single P-element insertions mutating 25% of vital Drosophila genes. Genetics153:135–177
    [Google Scholar]
  86. Sudarsanam P., Iyer V. R., Brown P. O., Winston F.. 2000; Whole-genome expression analysis of snf / swi mutants of Saccharomyces cerevisiae . Proc Natl Acad Sci USA97:3364–3369[CrossRef]
    [Google Scholar]
  87. Talaat A. M., Hunter P., Johnston S. A.. 2000; Genome-directed primers for selective labeling of bacterial transcripts for DNA microarray analysis. Nature Biotechnol18:679–682[CrossRef]
    [Google Scholar]
  88. Tang Y., Guest J. R.. 1999; Direct evidence for mRNA binding and post-transcriptional regulation by Escherichia coli aconitases. Microbiology145:3069–3079
    [Google Scholar]
  89. Tao H., Bausch C., Richmond C., Blattner F. R., Conway T.. 1999; Functional genomics: expression analysis of Escherichia coli growing on minimal and rich media. J Bacteriol181:6425–6440
    [Google Scholar]
  90. Thompson A., Lucchini S., Hinton J. C. D.. 2001; It’s easy to build your own microarrayer!. Trends Microbiol9:154–156[CrossRef]
    [Google Scholar]
  91. Troesch A., Nguyen H., Miyada C. G., Desvarenne S., Gingeras T. R., Kaplan P. M., Cros P., Mabilat C.. 1999; Mycobacterium species identification and rifampin resistance testing with high-density DNA probe arrays. J Clin Microbiol37:49–55
    [Google Scholar]
  92. Velculescu V. E., Zhang L., Zhou W., Vogelstein J., Basrai M. A., Bassett D. E. J., Hieter P., Vogelstein B., Kinzler K. W.. 1997; Characterization of the yeast transcriptome. Cell88:243–251[CrossRef]
    [Google Scholar]
  93. Vishwanath R. I., Horak C. E., Scafe C. S., Botstein D., Snyder M., Brown P. O.. 2001; Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF. Nature409:533–538[CrossRef]
    [Google Scholar]
  94. Wang E., Miller L. D., Ohnmacht G. A., Liu E. T., Marincola F. M.. 2000; High-fidelity mRNA amplification for gene profiling. Nature Biotechnol18:457–459[CrossRef]
    [Google Scholar]
  95. Wasinger V. C., Cordwell S. J., Cerpa-Poljak A.. 7 other authors 1995; Progress with gene-product mapping of the Mollicutes: Mycoplasma genitalium. Electrophoresis16:1090–1094[CrossRef]
    [Google Scholar]
  96. Wei Y., Lee J. M., Richmond C., Blattner F. R., Rafalski J. A., LaRossa R. A.. 2001; High-density microarray-mediated gene expression profiling of Escherichia coli. J Bacteriol183545–556[CrossRef]
    [Google Scholar]
  97. Wilson M., DeRisi J., Kristensen H. H., Imboden P., Rane S., Brown P. O., Schoolnik G. K.. 1999; Exploring drug-induced alterations in gene expression in Mycobacterium tuberculosis by microarray hybridization. Proc Natl Acad Sci USA96:12833–12838[CrossRef]
    [Google Scholar]
  98. Winzeler E. A., Richards D. R., Conway A. R.. 8 other authors 1998; Direct allelic variation scanning of the yeast genome. Science281:1194–1197[CrossRef]
    [Google Scholar]
  99. Winzeler E. A., Lee B., McCusker J. H., Davis R. W.. 1999a; Whole genome genetic-typing in yeast using high-density oligonucleotide arrays. Parasitology118 : SupplS73–S80
    [Google Scholar]
  100. Winzeler E. A., Shoemaker D. D., Astromoff A.. 49 other authors 1999b; Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis. Science285:901–906[CrossRef]
    [Google Scholar]
  101. Wodicka L., Dong H., Mittmann M., Ho M. H., Lockhart D. J.. 1997; Genome-wide expression monitoring in Saccharomyces cerevisiae. . Nature Biotechnol15:1359–1367[CrossRef]
    [Google Scholar]
  102. Wolfsberg T. G., Gabrielian A. E., Campbell M. J., Cho R. J., Spouge J. L., Landsman D.. 1999; Candidate regulatory sequence elements for cell cycle-dependent transcription in Saccharomyces cerevisiae. . Genome Res9:775–792
    [Google Scholar]
  103. Wyrick J. J., Holstege F. C., Jennings E. G., Causton H. C., Shore D., Grunstein M., Lander E. S., Young R. A.. 1999; Chromosomal landscape of nucleosome-dependent gene expression and silencing in yeast. Nature402:418–421[CrossRef]
    [Google Scholar]
  104. Ye R. W., Tao W., Bedzyk L., Young T., Chen M., Li L.. 2000; Global gene expression profiles of Bacillus subtilis grown under anaerobic conditions. J Bacteriol182:4458–4465[CrossRef]
    [Google Scholar]
  105. Yun C. W., Ferea T., Rashford J., Ardon O., Brown P. O., Botstein D., Kaplan J., Philpott C. C.. 2000; Desferrioxamine-mediated iron uptake in Saccharomyces cerevisiae . Evidence for two pathways of iron uptake. J Biol Chem275:10709–10715[CrossRef]
    [Google Scholar]
  106. Zhang M. Q.. 1999; Promoter analysis of co-regulated genes in the yeast genome. Comput Chem23:233–250[CrossRef]
    [Google Scholar]
  107. Zweiger G.. 1999; Knowledge discovery in gene-expression-microarray data: mining the information output of the genome. Trends Biotechnol17:429–436[CrossRef]
    [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/micro/10.1099/00221287-147-6-1403
Loading
/content/journal/micro/10.1099/00221287-147-6-1403
Loading

Data & Media loading...

This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error