1887

Abstract

Analysis of a region of chromosomal DNA lying between and in the gene cluster for jadomycin biosynthesis in ISP5230 detected an ORF encoding 584 amino acids similar in sequence to the biotin carboxylase (BC) and biotin carboxyl carrier protein (BCCP) components of acyl-coenzyme A carboxylases. Multiple sequence alignments of the deduced Jad protein with acyl-coenzyme A carboxylases from various sources located the BC and BCCP components in the N- and C-terminal regions, respectively, of the deduced polypeptides. The organization and amino acid sequence of the deduced polypeptide most closely resembled those in other Gram-positive bacteria broadly classified as actinomycetes. Disrupting the gene, designated , severely reduced but did not eliminate jadomycin production. The disruption had no effect on growth or morphology of the organism, implying that the product of is not essential for fatty acid biosynthesis. It is concluded that supplies malonyl-coenzyme A for biosynthesis of the polyketide intermediate that is eventually processed to form the antibiotic jadomycin B.

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2000-04-01
2024-04-19
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References

  1. Alberts A., Vagelos P. R. 1972; Acyl coenzyme A carboxylases. In The Enzymes pp. 17–82Edited by Boyer P. D. New York: Academic Press;
    [Google Scholar]
  2. Altschul S. F., Madden T. L., Schäffer A. A., Zhang J., Zheng Z., Miller W., Lipman D. J. 1997; Gapped b last and psi-blast: a new generation of protein database search programs. Nucleic Acids Res 25:3389–3402 [CrossRef]
    [Google Scholar]
  3. Ayer S. W., McInnes A. G., Thibault P., Walter J. A., Doull J. L., Parnell T., Vining L. C. 1991; Jadomycin, a novel 8H-benz[b]oxazolo[3,2-f]phenanthridine antibiotic from Streptomyces venezuelae ISP5230. Tetrahedron Lett 32:6301–6304 [CrossRef]
    [Google Scholar]
  4. Chater K. F., Bibb M. J. 1997; Regulation of bacterial antibiotic production. In Biotechnology vol. 7Products of Secondary Metabolism pp. 57–105Edited by Kleinkauf H., von Dohren H. Weinheim: VCH;
    [Google Scholar]
  5. Devereux J., Haeberli P., Smithies O. 1984; A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res 12:387–395 [CrossRef]
    [Google Scholar]
  6. Donadio S., Staver M. J., Katz L. 1996; Erythromycin production in Saccharopolyspora erythraea does not require a functional propionyl-CoA carboxylase. Mol Microbiol 19:977–984 [CrossRef]
    [Google Scholar]
  7. Doull J. L., Ayer S. W., Singh A. K., Thibault P. 1993; Production of a novel polyketide antibiotic, jadomycin B, by Streptomyces venezuelae following heat shock. J Antibiot 46:849–871
    [Google Scholar]
  8. Doull J. L., Singh A. K., Hoare M., Ayer S. W. 1994; Conditions for the production of jadomycin B by Streptomyces venezuelae ISP5230: effects of heat shock, ethanol treatment and phage infection. J Ind Microbiol 13:120–125 [CrossRef]
    [Google Scholar]
  9. Han L., Yang K., Ramalingam E., Mosher R. H., Vining L. C. 1994; Cloning and characterization of polyketide synthase genes for jadomycin B biosynthesis in Streptomyces venezuelae ISP5230. Microbiology 140:3379–3389 [CrossRef]
    [Google Scholar]
  10. Hopwood D. A., Bibb M. J., Chater K. F.7 other authors 1985 Genetic Manipulation of Streptomyces: a Laboratory Manual Norwich: John Innes Foundation;
    [Google Scholar]
  11. Jäger W., Peters-Wendisch P. G., Kalinowski J., Pühler A. 1996; A Corynebacterium glutamicum gene encoding a two-domain protein similar to biotin carboxylases and biotin-carboxyl-carrier proteins. Arch Microbiol 166:76–82 [CrossRef]
    [Google Scholar]
  12. Kulowski K., Wendt-Pienkowski E., Han L., Yang K., Vining L. C., Hutchinson C. R. 1999; Functional characterization of the jadI gene as a cyclase forming angucyclinones. J Am Chem Soc 121:1786–1794 [CrossRef]
    [Google Scholar]
  13. Larson J. L., Hershberger C. L. 1986; The minimal replicon of a streptomycete plasmid produces an ultrahigh level of plasmid DNA. Plasmid 15:199–209 [CrossRef]
    [Google Scholar]
  14. Le Gouill C., Desmarais D., Déry C. V. 1993; Saccharopolyspora hirsuta 367 encodes clustered genes similar to ketoacyl synthase, ketoacyl reductase, acyl carrier protein, and biotin carboxyl carrier protein. Mol Gen Genet 240:146–150 [CrossRef]
    [Google Scholar]
  15. Li S. J., Cronan J. E. Jr 1992; The gene encoding the biotin carboxylase subunit of Escherichia coli acetyl-CoA carboxylase. J Biol Chem 267:855–863
    [Google Scholar]
  16. MacNeil D. J., Gewain K. M., Rudy C. L., Dezeny G., Gibbons P. H., MacNeil T. 1992; Analysis of Streptomyces avermitilis genes required for avermectin biosynthesis utilizing a novel integration vector. Gene 111:61–68 [CrossRef]
    [Google Scholar]
  17. Malpartida F., Hallam S. E., Kieser H. M.9 other authors 1987; Homology between Streptomyces genes coding for synthesis of different polyketides used to clone antibiotic biosynthetic genes. Nature 325:818–821 [CrossRef]
    [Google Scholar]
  18. Marini P., Li S.-J., Gardiol D., Cronan J. R., de Mendoza D. 1995; The genes encoding the biotin carboxyl carrier protein and biotin carboxylase subunits of Bacillus subtilis acetyl coenzyme A carboxylase, the first enzyme of fatty acid biosynthesis. J Bacteriol 177:7003–7006
    [Google Scholar]
  19. Meurer G., Gerlitz M., Wendt-Pienkowski E., Vining L. C., Rohr J., Hutchinson C. R. 1998; Iterative type II polyketide synthases, cyclases and ketoreductases exhibit context-dependent behaviour in the biosynthesis of linear and angular decapolyketides. Chem Biol 4:433–443
    [Google Scholar]
  20. Norman E., De Smet K. A. L., Stoker N. G., Ratledge C., Wheeler P. R., Dale J. W. 1994; Lipid synthesis in Mycobacteria: characterization of the biotin carboxyl carrier protein genes from Mycobacterium leprae and M. tuberculosis. J Bacteriol 176:2525–2531
    [Google Scholar]
  21. Paradkar A. S., Stuttard C., Vining L. C. 1993; Location of the genes for anthranilate synthase in Streptomyces venezuelae ISP5230: genetic mapping after integration of the cloned genes. J Gen Microbiol 139:687–694 [CrossRef]
    [Google Scholar]
  22. Perez C. A., Marini P., de Mendoza D. 1998; Effects on Bacillus subtilis of conditional expression of the accBC operon encoding subunits of acetyl coenzyme A carboxylase, the first enzyme of fatty acid synthesis. Microbiology 144:895–903 [CrossRef]
    [Google Scholar]
  23. Ramalingam E. 1989 Polyketide synthase gene of Streptomyces venezuelae MSc thesis Dalhousie University; Halifax, NS, Canada:
    [Google Scholar]
  24. Rock C. O., Cronan J. E. 1996; Escherichia coli as a model for the regulation of dissociable (type II) fatty acid biosynthesis. Biochim Biophys Acta 1302:1–16 [CrossRef]
    [Google Scholar]
  25. Rohr J., Thiericke R. 1992; Angucycline group antibiotics. Nat Prod Rep 9:103–137 [CrossRef]
    [Google Scholar]
  26. Sambrook J., Fritsch E. F., Maniatis T. 1989 Molecular Cloning: a Laboratory Manual Cold Spring Harbor, NY: Cold Spring Harbor Laboratory;
    [Google Scholar]
  27. Samols D., Thornton C. G., Murtif V. L., Kumar G. K., Haase F. C., Wood H. G. 1988; Evolutionary conservation among biotin enzymes. J Biol Chem 263:6461–6464
    [Google Scholar]
  28. Stanzak R., Matsushima P., Baltz R. H., Rao R. N. 1986; Cloning and expression in Streptomyces lividans of clustered erythromycin biosynthesis genes from Streptomyces erythreus. Bio/Technology 4:229–232 [CrossRef]
    [Google Scholar]
  29. Stuttard C. 1982; Temperate phage of Streptomyces venezuelae: lysogeny and host specificity shown by SV1 and SV2. J Gen Microbiol 128:115–121
    [Google Scholar]
  30. Thompson J. D., Higgins D. G., Gibson T. J. 1994; clustal w: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673–4680 [CrossRef]
    [Google Scholar]
  31. Toh H., Kondo H., Tanabe T. 1993; Molecular evolution of biotin-dependent carboxylases. Eur J Biochem 215:687–696 [CrossRef]
    [Google Scholar]
  32. Tosata V., Albertini A. M., Zotti M., Sonda S., Bruschi C. V. 1997; Sequence completion, identification and definition of the fengycin operon in Bacillus subtilis 168. Microbiology 143:3443–3450 [CrossRef]
    [Google Scholar]
  33. Yang K., Han L., Vining L. C. 1995; Regulation of jadomycin B production in Streptomyces venezuelae ISP5230: involvement of a repressor gene, jadR 2. J Bacteriol 177:6111–6117
    [Google Scholar]
  34. Yang K., Han L., Ayer S. W., Vining L. C. 1996; Accumulation of the angucycline antibiotic rabelomycin after disruption of an oxygenase gene in the jadomycin B biosynthetic gene cluster of Streptomyces venezuelae. Microbiology 142:123–132 [CrossRef]
    [Google Scholar]
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