Molecular analysis of the DNA gyrB gene from Myxococcus xanthus

References

1. Adachi, T., Mizuuchi, M., Robinson, E. A., Appella, E., O'Dea, M. H., Gellert, M., Mizuuchi, K. (1987); DNA sequence of the E. coli gyrB gene: application of a new sequencing strategy.. Nucleic Acids Res 15,:771–784
   [Google Scholar]
2. Ali, J. A., Jackson, A. P., Howells, A. J., Maxwell, A. (1993); The 43 kDa N-terminal fragment of gyrase B protein hydrolyses ATP and binds coumarin drugs.. Biochemistry 24,:2717–2724
   [Google Scholar]
3. Altschul, S. F., Gish, W., Miller, W., Myers, W., Lipman, D. J. (1990); Basic local alignment search tool.. J Mol Biol 251,:403–410
   [Google Scholar]
4. Ausubei, F. M., Brent, R., Kingston, R. E., Moore, D. D., Seidman, J. D., Smith, A. J., Struhl, K. (editors). (1994) Current Protocols in Molecular Biology, chapter 10.10. New York:: Wiley;
   [Google Scholar]
5. Avery, L., Kaiser, D. (1983); In situ transposon replacement and isolation of spontaneous tandem duplication.. Mol Gen Genet 191,:99–109
   [Google Scholar]
6. Calcutt, M. J. (1994); Gene organization in the dnaA-gyrA region of the Streptomyces coelicolor chromosome.. Gene 151,:23–28
   [Google Scholar]
7. Chen, H., Kuspa, A., Keseler, I. M., Shimkets, L. J. (1991); Physical map of the Myxococcus xanthus chromosome.. J Bacteriol 173,:2109–2115
   [Google Scholar]
8. Crumplin, G. C. (editors). (1990) The 4-Quinolones. London:: Springer.;
   [Google Scholar]
9. Fleischmann, R. D., Adams, M. D., White, O. 37 other authors (1995); Whole-genome random sequencing and assembly of Haemophilus influenzae Rd.. Science 269,:496–512
   [Google Scholar]
10. Fujita, M. Q., Yoshikawa, H., Ogasawara, N. (1989); Structure of the dnaA region of Pseudomonas putida: conservation among three bacteria, Bacillus subtilis, Escherichia coli and P. putida.. Mol Gen Genet 215,:381–387
    [Google Scholar]
11. Gellert, M., O'Dea, M. H., Itoh, T., Tomizawa, J. (1976); Novobiocin and coumermycin inhibit DNA supercoiling catalysed by DNA gyrase. Proc Natl Acad Sci USA 73,4474–4478
    [Google Scholar]
12. Gilbert, E. J., Maxwell, A. (1994); The 24 kDa N-terminal subdomain of DNA gyrase B protein binds coumarin drugs.. Mol Microbiol 12,:365–373
    [Google Scholar]
13. He, Q., Chen, H., Kuspa, A., Cheng, Y., Kaiser, D., Shimkets, L. J. (1994); A physical map of the Myxococcus xanthus chromosome.. Proc Natl Acad Sci USA 91,9584–9587
    [Google Scholar]
14. Holmes, M. L., Dyall-Smith, M. L. (1991); Mutations in DNA gyrase result in novobiocin resistance in halophilic archae- bacteria.. J Bacteriol 173,:642–648
    [Google Scholar]
15. Janssen, G. R., Wireman, J. W., Dworkin, M. (1977); Effect of temperature on the growth of Myxococcus xanthus.. J Bacteriol 130,:561–562
    [Google Scholar]
16. Komano, T., Inouye, S., Inouye, M. (1985); Physical mapping of a 330 X 10³-base-pair region of the Myxococcus xanthus chromosome that is preferentially labeled during spore germination.. J Bacteriol 162,:1124–1130
    [Google Scholar]
17. Kuspa, A., Vollrath, D., Cheng, Y., Kaiser, D. (1989); Physical mapping of the Myxococcus xanthus genome by random cloning in yeast artificial chromosomes.. Proc Natl Acad Sci USA 86,:8917–8921
    [Google Scholar]
18. Ladefoged, S. A., Christiansen, G. (1994); Sequencing analysis reveals a unique gene organization in the gyrB region of Mycoplasma hominis.. J Bacteriol 176,:5835–5842
    [Google Scholar]
19. Laemmli, U. K. (1970); Cleavage of structural proteins during the assembly of the head of bacteriophage T4.. Nature 227,:680–685
    [Google Scholar]
20. Margerrison, E. E., Hopewell, R., Fisher, L. M. (1992); Nucleotide sequence of the Staphylococcus aureus gyrB-gyrA locus encoding the DNA gyrase A and B proteins.. J Bacteriol 174,:1596–1603
    [Google Scholar]
21. Miyata, M., Sano, K. I., Okada, R., Fukumura, T. (1993); Mapping of replication initiation site in Mycoplasma capricolum genome by two-dimensional gel-electrophoretic analysis.. Nucleic Acids Res 21,:4816–1823
    [Google Scholar]
22. Moriya, S., Ogasawara, N., Yoshikawa, H. (1985); Structure and function of the region of the replication origin of the Bacillus subtilis chromosome. III. Nucleic acid sequence of some 10,000 base pairs in the origin region.. Nucleic Acids Res 13,:2251–2265
    [Google Scholar]
23. Norrander, J., Kempe, T., Messing, J. (1983); Construction of improved M13 vector.. Gene 26,:101–106
    [Google Scholar]
24. O'Brien, S. J. (1990) Genetic Maps; Bacteria, Algae, and Protozoa. Cold Spring Harbor, NY:: Cold Spring Harbor Laboratory,;2.54–2.70
    [Google Scholar]
25. Ogasawara, N., Moriya, S., von Meyenburg, K., Hansen, F. G., Yoshikawa, H. (1985); Conservation of genes and their organization in the chromosomal replication origin of Bacillus subtilis and Escherichia coli.. EMBO J 4,:3345–3350
    [Google Scholar]
26. Ogasawara, N., Fujita, M. Q., Moriya, S., Fukuoka, M., Hirano, M., Yoshikawa, H. (1990) Comparative anatomy of oriC of eubacteria.. Edited by Drlica, K., Riley, M. The Bacterial Chromosome, Washington, DC:: American Society for Microbiology,;287–295
    [Google Scholar]
27. Old, I. G., Margarita, D., Saint Girons, I. (1993); Unique genetic arrangement in the dnaA region of the Borrelia burgdorferi linear chromosome: nucleotide sequence of the dnaA gene.. FEMS Microbiol Lett 111,:109–114
    [Google Scholar]
28. Orr, E., Staudenbauer, W. L. (1982); Bacillus subtilis DNA gyrase: purification of subunits and reconstitution of supercoiling activity.. J Bacteriol 151,:524–527
    [Google Scholar]
29. Orr, E., Fairweather, N. F., Holland, I. B., Pritchard, R. H. (1979); Isolation and characterisation of a strain carrying a conditional lethal mutation in the cou gene of Escherichia coli K-12.. Mol Gen Genet 111,103–112
    [Google Scholar]
30. Orr, E., Lother, H., Lurz, R., Wahle, E. (1984) Escherichia coli DNA gyrase.. Edited by Hubscher U., Spadari S. Proteins Involved in DNA Replication. New York:: Plenum.;395–407
    [Google Scholar]
31. Parales, R. E., Harwood, C. S. (1990); Nucleotide sequence of the gyrB gene of Pseudomonas putida.. Nucleic Acids Res 18,:5580
    [Google Scholar]
32. Pearson, W. R. (1990); Rapid and sensitive sequence comparison with FASTP and FASTA.. Methods in Enzymology, Vol 46: Research on Nitrification and Related Processes, Pt B 183,:63–98
    [Google Scholar]
33. Reichenbach, H. (1993) Biology of the myxobacteria: ecology and taxonomy.. In Edited by Dworkin, M., Kaiser, D. Myxobacteria II. Washington, DC:: American Society for Microbiology,;13–62
    [Google Scholar]
34. Sambrook, J., Fritsch, E. F., Maniatis, T. (1989) Molecular Cloning: a Laboratory Manual., 2nd edn.. Cold Spring Harbor, NY:: Cold Spring Harbor Laboratory;
    [Google Scholar]
35. Sanger, F., Nicklen, S., Coulson, A. R. (1977); DNA sequencing with chain-terminating inhibitors.. Proc Natl Acad Sci USA 74,:5463–5467
    [Google Scholar]
36. Sedgwick, S. G., Morgan, S.B. A. (1994); Locating, DNA sequencing and disrupting yeast genes using tagged Tn1000.. Methods Mol Genet 3,:131–140
    [Google Scholar]
37. Shimkets, L. J. (1993) The myxobacterial genome.. In Edited by Dworkin, M., Kaiser, D. Myxo-bacteria II. Washington, DC:: American Society for Microbiology,;85–107
    [Google Scholar]
38. Staudenbauer, W. L., Orr, E. (1981); DNA gyrase: affinity chromatography on novobiocin-Sepharose and catalytic properties.. Nucleic Acids Res 9,:3589–3603
    [Google Scholar]
39. Swanberg, S. L., Wang, J. C. (1987); Cloning and sequencing of the Escherichia coli gyrA gene coding for the A subunit of DNA gyrase.. Journal of Molecular Biology 197,:729–736
    [Google Scholar]
40. Tolchinsky, S., Fuchs, N., Varon, M., Rosenberg, E. (1992); Use of Tn5lac to study expression of genes required for antibiotic TA production.. Antimicrob Agents Chemother 36,:2322–2327
    [Google Scholar]
41. Varon, M., Fuchs, N., Monosov, M., Tolchinsky, S., Rosenberg, E. (1992); Mutation and mapping of genes involved in antibiotic TA production in Myxococcus xanthus.. Antimicrob Agents Chemother 36,:2316–2321
    [Google Scholar]
42. Wang, J. C. (1996); DNA topoisomerases.. Annu Rev Biochem 65,:635–692
    [Google Scholar]
43. Yoshikawa, H., Ogasawara, N. (1991); Structure and function of DnaA and DnaA-box in eubacteria: evolutionary relationships of bacterial replication origins.. Mol Microbiol 5,:2589–2597
    [Google Scholar]