1887

Abstract

Summary: Forty-four strains of and 12 representative cultures of , , , , , , and were compared using numerical taxonomic techniques based upon 86 unit characters. Data were examined using the simple matching () and Jaccard () coefficients, and clustering was achieved using the unweighted pair group method with arithmetic averages (UPGMA) technique. Cluster composition was barely affected by the statistics used, or by the test error, which was estimated at 0·36%. The renibacteria formed a distinct and homogeneous cluster and were distinguished from the marker cultures by a characteristic API-ZYM profile. An emended description of is presented, based on the numerical data and the results of recent chemical and microbiological studies.

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1985-10-01
2022-08-10
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References

  1. Alderson G. 1982 Numerical and chemical classification of the genus Streptomyces Ph.D. thesis, University of Newcastle upon Tyne, UK;
    [Google Scholar]
  2. Austin B., Embley T. M., Goodfellow M. 1983; Selective isolation of Renibacterium salmoninarum. FEMS Microbiology Letters 17:111–114
    [Google Scholar]
  3. Broom A. K., Sneath P. H. A. 1981; Numerical taxonomy of Haemophilus. Journal of General Microbiology 126:123–149
    [Google Scholar]
  4. Bullock G. L., Stuckey H. M. 1975; Fluorescent antibody identification and detection of the Coryne-bacterium causing kidney disease in salmonids. Journal of the Fisheries Research Board of Canada 32:2224–2227
    [Google Scholar]
  5. Bullock G. L., Stuckey H. M., Wolf K. 1975; Bacterial kidney disease of salmonid fish. Fish and Wildlife Service Fish Diseases Leaflet no. 41 Washington, DC: US Department of the Interior;
    [Google Scholar]
  6. Collins M. D. 1982; Lipid composition of Renibacterium salmoninarum (Sanders and Fryer). FEMS Microbiology Letters 13:295–297
    [Google Scholar]
  7. Collins M. D., Feresu S., Jones D. 1983; Cell wall, DNA base composition and lipid studies on Listeria denitrificans (Prevot). FEMS Microbiology Letters 18:131–134
    [Google Scholar]
  8. Cowan S. T. 1974; Cowan and Steel’s Manual for the Identification of Medical Bacteria. , 2nd edn.. Cambridge: Cambridge University Press;
    [Google Scholar]
  9. Davis G. H. G., Fomin L., Wilson E., Newton K. G. 1969; Numerical taxonomy of Listeria streptococci and possibly related bacteria. Journal of General Microbiology 57:333–348
    [Google Scholar]
  10. Embley T. M. 1983 Aspects of the biology of Renibacterium salmoninarum Ph.D. thesis, University of Newcastle upon Tyne, UK;
    [Google Scholar]
  11. Embley T. M., Goodfellow M., Austin B. 1982; A semi-defined growth medium for Renibacterium salmoninarum. FEMS Microbiology Letters 14:229301
    [Google Scholar]
  12. Embley T. M., Goodfellow M., Minnikin D. E., Austin B. 1983; Fatty acid, isoprenoid quinone and polar lipid composition in the classification of Renibacterium salmoninarum. Journal of Applied Bacteriology 55:31–37
    [Google Scholar]
  13. Fiedler F., Seger J. 1983; The murein type of Listeria grayi, Listeria murrayi and Listeria denitrificans. Systematic and Applied Microbiology 41:444450
    [Google Scholar]
  14. Fiedler F., Seger J., Schrettenbrunner A., Seeliger H. P. R. 1984; The biochemistry of murein and cell wall teichoic acids in the genus Listeria. Systematic and Applied Microbiology 5:360–376
    [Google Scholar]
  15. Fryer J. L., Sanders J. E. 1981; Bacterial kidney disease of salmonid fish. Annual Review of Microbiology 35:273–298
    [Google Scholar]
  16. Goodfellow M., Cross T. 1984 Classification. In The Biology of the Actinomycetes. pp. 7–164 Edited by Goodfellow M., Mordarski M., Williams S. T. London: Academic Press;
    [Google Scholar]
  17. Grange J. M. 1978; Fluorimetric assay of mycobacterial group specific hydrolase enzymes. Journal of Clinical Pathology 31:378–381
    [Google Scholar]
  18. Grange J. M., Clark K. 1977; Use of umbellifer-one derivatives in the study of enzyme activities of mycobacteria. Journal of Clinical Pathology 30:151–153
    [Google Scholar]
  19. Hucker G. L., Conn H. J. 1923; Methods of Gram staining. Technical Bulletin of the New York State Agricultural Experimental Station no. 93
    [Google Scholar]
  20. Holmberg K., Hallander H. O. 1973; Numerical taxonomy and laboratory identification of Bacterionema matruchotii Rothia dentocariosa Actinomyces naeslundii Actinomyces viscosus and some related bacteria. Journal of General Microbiology 76:43–63
    [Google Scholar]
  21. Jones D. 1975; A numerical taxonomic study of coryneform and related bacteria. Journal of General Microbiology 87:52–96
    [Google Scholar]
  22. Kovacs N. 1956; Identification of Pseudomonas pyocyanea by the oxidase reaction. Nature London: 168703
    [Google Scholar]
  23. Kusser W., Fiedler F. 1983; Murein type and polysaccharide composition of cell walls from Renibacterium salmoninarum. FEMS Microbiology Letters 20:391–394
    [Google Scholar]
  24. Ordal E. J., Earp B. J. 1956; Cultivation and transmission of the etiological agent of kidney disease in salmonid fish. Proceedings of the Society for Experimental Biology and Medicine 92:85–88
    [Google Scholar]
  25. Sanders J. E., Fryer J. L. 1978; Corynebacterium salmoninus sp. nov. The causative agent of bacterial kidney disease; selected biochemical properties and pathogenesis in salmonid fishes. Proceedings of the Joint 3rd Biennial Fish Health Section and 9th Annual Midwest Fish Disease Workshops Kansas City Mo. USA: pp. 28–33
    [Google Scholar]
  26. Sanders J. E., Fryer J. L. 1980; Renibacterium salmoninarum gen. nov., sp. nov., the causative agent of bacterial kidney disease of salmonid fish. International Journal of Systematic Bacteriology 30:496502
    [Google Scholar]
  27. Schleifer K. H., Kandler O. 1972; Peptidogly-can types of bacterial cell walls and their taxonomic implications. Bacteriological Reviews 36:407–477
    [Google Scholar]
  28. Sierra G. 1957; A simple method for the detection of lipolytic activity of microorganisms and some observations on the influence of the contact between cells and fatty substrates. Antonie van Leeuwenhoek 23:15–22
    [Google Scholar]
  29. Schofield G. M., Schaal K. P. 1981; A numerical taxonomic study of members of the Actinomycetaceae and related taxa. Journal of General Microbiology 127:237–259
    [Google Scholar]
  30. Smith I. W. 1964; The occurrence and pathology of Dee Disease. Freshwater and Salmon Fisheries Research no. 34. Edinburgh: Her Majesty’s Stationery Office;
    [Google Scholar]
  31. Sneath P. H. A. 1957; The application of computers to taxonomy. Journal of General Microbiology 17:201–226
    [Google Scholar]
  32. Sneath P. H. A. 1978; Classification of microorganisms. In Essays in Microbiology pp. 091-9 31 Edited by Norris J. R., Richmond M. H. Chichester: John Wiley;
    [Google Scholar]
  33. Sneath P. H. A., Johnson R. 1972; The influence on numerical taxonomic similarities of errors in microbiological tests. Journal of General Microbiology 72:377–392
    [Google Scholar]
  34. Sneath P. H. A., Sokal R. R. 1973 Numerical Taxonomy London: W. H. Freeman;
    [Google Scholar]
  35. Sneath P. H. A., Stevens M. 1967; A divided Petri dish for use with multipoint inoculators. Journal of Applied Bacteriology 30:495–497
    [Google Scholar]
  36. Sokal R., Michener C. D. 1958; A statistical method for evaluating systematic relationships. Kansas University Science Bulletin; 381409–1438
    [Google Scholar]
  37. Stackebrandt E., Woese C. R. 1979; A phylogenetic dissection of the family Micrococcaceae. Current Microbiology 2:317–322
    [Google Scholar]
  38. Stackebrandt E., Woese C. R. 1981; The evolution of prokaryotes In. In Molecular and Cellular Aspects of Microbial Evolution pp. 1–31 Edited by Carlile M. J., Collins J. F., Moseley B. E. B. Cambridge: Cambridge University Press;
    [Google Scholar]
  39. Stackebrandt E., Fowler V. J., Fiedler F., Seiler H. 1983; Taxonomic studies on Arthrobacter nicotianae and related taxa: description of Arthrobacter sulfureus sp. nov. and reclassification of Brevibacterium protophormiae as Arthrobacter proto-phormiae comb. nov. Systematic and Applied Microbiology 4:470–486
    [Google Scholar]
  40. VladÍk P., Vitovec J., Červinka S. 1974; The taxonomy of Gram-positive immobile diplobacilli isolated from necrotizing nephroses in American char and rainbow trout. Veterianami medicina 19:233–238
    [Google Scholar]
  41. Weiss N., Schleifer K. H., Kandler O. 1981; The peptidoglycan types of Gram-positive anaerobic bacteria and their taxonomic implications. Revue del’ Institut Pasteur; Lyon: 143–12
    [Google Scholar]
  42. Wellington E. M. H., Williams S. T. 1979; Preservation of actinomycete inoculum in frozen glycerol. Microbios Letters 6:151–157
    [Google Scholar]
  43. Wilkinson B. J., Jones D. 1977; A numerical taxonomic survey of Listeria and related bacteria. Journal of General Microbiology 98:399–421
    [Google Scholar]
  44. Wishart D. 1978 Clustan User Manual Version 1C release, 2, 3rd edn.. Edinburgh: Edinburgh University Program Library Unit;
    [Google Scholar]
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