Numerical and Chemical Classification of Free

Abstract

Twenty-one strains of and marker cultures of and the ‘’ taxon were subjected to numerical phenetic analyses using 92 unit characters. The data were examined using the simple matching ( ), Jaccard ( ) and pattern ( ) coefficients and clustering was achieved using the unweighted average linkage algorithm. Neither cluster nor aggregate cluster composition was markedly affected by the coefficient used or by test error, estimated at 1·5%. The strains formed a distinct and homogeneous cluster which showed its highest similarity to phena equated with and . The non-hydroxylated fatty acid composition and overall size of the mycolic acids was similar to that found to be characteristic of , though the long-chain in the 2-position of the mycolic acids was relatively much richer in monounsaturated components. , in containing dihydrogenated menaquinones with nine isoprene units, is clearly distinguished from established representatives of .

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1982-06-01
2024-03-29
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References

  1. Collins M. D., Pirouz T., Goodfellow M., Minnikin D. E. 1977; Distribution of mena-quinones in actinomycetes and corynebacteria. Journal of General Microbiology 100:221–230
    [Google Scholar]
  2. Collins M. D., Goodfellow M., Minnikin D. E. 1982; A survey of the structures of mycolic acids in Corynebacterium and related taxa. Journal of General Microbiology 128:129–149
    [Google Scholar]
  3. EtÉmadi A.-H. 1967; The use of pyrolysis gas chromatography and mass spectroscopy in the study of the structure of mycolic acids. Journal of Gas Chromatography 5:447–456
    [Google Scholar]
  4. Goodfellow M. 1971; Numerical taxonomy of some nocardioform bacteria. Journal of General Microbiology 69:33–80
    [Google Scholar]
  5. Goodfellow M., Alderson G. 1977; The actinomycete-genus Rhodococcus: a home for the ‘rhodochrous’ complex. Journal of General Microbiology 100:99–122
    [Google Scholar]
  6. Goodfellow M., Minnikin D. E. 1977; Nocardioform bacteria. Annual Review of Microbiology 31:159–180
    [Google Scholar]
  7. Goodfellow M., Minnikin D. E. 1981; The genera Nocardia and Rhodococcus. In The Prokaryotes: A Handbook of Habitats, Isolation, and Identification of Bacteria pp. 2016–2027 Starr M. P., Stolp H., Trüper H. G., Balows A., Schlegel H. G. Edited by Berlin:: Springer Verlag;
    [Google Scholar]
  8. Goodfellow M., Pirouz T. 1982; Numerical classification of sporoactinomycetes containing meso-diaminopimelic acid in the cell wall. Journal of General Microbiology 128:503–527
    [Google Scholar]
  9. Goodfellow M., Orlean P. A. B., Collins M. D., Alshamaony L., Minnikin D. E. 1978; Chemical and numerical taxonomy of strains received as Gordona aurantiaca. Journal of General Microbiology 109:57–68
    [Google Scholar]
  10. Goodfellow M., Weaver C. R., Minnikin D. E. 1982; Numerical classification of some rhodococci, corynebacteria and related organisms. Journal of General Microbiology 128:731–745
    [Google Scholar]
  11. Gordon R. E., Mihm J. M. 1962; Identification of Nocardia caviae (Erikson) nov.comb. Annals of the New York Academy of Sciences 98:628–636
    [Google Scholar]
  12. Gordon R. E., Mishra S. K., Barnett D. A. 1978; Some bits and pieces of the genus Nocardia: N. carnea, N. vaccinii, N. transvalensis, N. orientalis and N. aerocolonigenes. Journal of General Microbiology 109:69–78
    [Google Scholar]
  13. Hecht S. T., Causey W. A. 1976; Rapid method for the detection and identification of mycolic acids in aerobic actinomycetes and related bacteria. Journal of Clinical Microbiology 4:284–287
    [Google Scholar]
  14. Lacey J., Goodfellow M. 1975; A novel actinomycete from sugar-cane bagasse: Saccharopolyspora hirsuta gen. et sp.nov. Journal of General Microbiology 88:75–85
    [Google Scholar]
  15. Lechevalier H. A., Lechevalier M. P., Wyszkowski P. A., Mariat F. 1976; Actino-mycetes found in sewage-treatment plants of the activated sludge type. In Actinomycetes: The Boundary Micro-organisms pp. 227–247 Arai T. Edited by Tokyo:: Toppan Co;
    [Google Scholar]
  16. Lechevalier M. P., Lechevalier H. 1970; Chemical composition as a criterion in the classification of aerobic actinomycetes. International Journal of Systematic Bacteriology 20:435–444
    [Google Scholar]
  17. Lechevalier M. P., Lechevalier H. A. 1974; Nocardia amarae sp.nov., an actinomycete common in foaming activated sludge. International Journal of Systematic Bacteriology 24:278–288
    [Google Scholar]
  18. Lechevalier M. P., De BiÈvre C., Lechevalier H. 1977; Chemotaxonomy of aerobic actino-mycetes: phospholipid composition. Biochemical Systematics and Ecology 5:249–260
    [Google Scholar]
  19. Minnikin D. E., Goodfellow M. 1980; Lipid composition in the classification and identification of acid-fast bacteria. In Microbiological Classification and Identification pp. 189–256 Goodfellow M., Board R. G. Edited by London:: Academic Press.;
    [Google Scholar]
  20. Minnikin D. E., Goodfellow M. 1981; Lipids in the classification of actinomycetes. Zentralblatt für Bakteriologie, Parasitenkunde, Infektions-krankheiten und Hygiene (Abteilung I) Supplement 11:99–109
    [Google Scholar]
  21. Minnikin D. E., Alshamaony L., Goodfellow M. 1975; Differentiation of Mycobacterium, Nocardia and related taxa by thin-layer chromatographic analysis of whole-organism methanolysates. Journal of General Microbiology 88:200–204
    [Google Scholar]
  22. Minnikin D. E., Goodfellow M., Collins M. D. 1978; Lipid composition in the classification and identification of coryneform and related taxa. In Coryneform Bacteria pp. 85–160 Bousefield I. J., Callely A. G. Edited by London:: Academic Press;
    [Google Scholar]
  23. Minnikin D. E., Hutchinson I. G., Caldicott A. B., Goodfellow M. 1980; Thin-layer chromatography of methanolysates of mycolic acid-containing bacteria. Journal of Chromatography 188:221–233
    [Google Scholar]
  24. Miwa T. K., Mikolajczak K. L., Earle F. R., Wolff I. A. 1960; Gas chromatographic characterization of fatty acids. Analytical Chemistry 32:1739–1742
    [Google Scholar]
  25. Mordarska H., Mordarski M., Goodfellow M. 1972; Chemotaxonomic characters and classification of some nocardioform bacteria. Journal of General Microbiology 71:77–86
    [Google Scholar]
  26. Mordarski M., Szyba K., Tkacz A., Kaszen I. 1977; Comparison of DNA homology in Nocardia amarae, N. autotrophica and Rhodococcus strains. The Biology of the Actinomycetes and Related Organisms 12:21–26
    [Google Scholar]
  27. Mordarski M., Goodfellow M., Szyba K., Tkacz A., Pulverer G., Schaal K. P. 1980; Ribosomal ribonucleic acid similarities in the classification of Rhodococcus and allied taxa. Journal of General Microbiology 118:313–319
    [Google Scholar]
  28. Orchard V. A., Goodfellow M. 1980; Numerical classification of some named strains of Nocardia asteroides and related isolates from soil. Journal of General Microbiology 118:295–312
    [Google Scholar]
  29. Orchard V. A., Goodfellow M., Williams S. T. 1977; Selective isolation and occurrence of nocardiae in soil. Soil Biology and Biochemistry 9:233–238
    [Google Scholar]
  30. Sneath P. H. A. 1957; The applications of com-puters to taxonomy. Journal of General Microbiology 17:201–226
    [Google Scholar]
  31. Sneath P. H. A. 1968; Vigour and pattern in taxonomy. Journal of General Microbiology 54:1–11
    [Google Scholar]
  32. Sneath P. H. A., Sokal R. R. 1973 Numerical Taxonomy. The Principles and Practice of Numerical Classification. San Francisco:: W. H. Freeman;
    [Google Scholar]
  33. Sokal R. R., Michener C. D. 1958; A statistical method for evaluating systematic relationships. Kansas University Science Bulletin 38:1409–1438
    [Google Scholar]
  34. Tsukamura M. 1974; A further numerical taxon-omic study of the rhodochrous group. Japanese Journal of Microbiology 18:37–44
    [Google Scholar]
  35. Williams S. T., Wellington E. M. H., Tipler L. S. 1980; The taxonomic implications of the reactions of representative Nocardia strains to actinophage. Journal of General Microbiologv 119:173–178
    [Google Scholar]
  36. Wishart D. 1968 A Fortran II Program for Numerical Taxonomy. St Andrews:: University of St Andrews;
    [Google Scholar]
  37. Yamada Y., Inouye G., Tahara Y., Kondo K. 1976; The menaquinone system in the classification of coryneform and nocardioform bacteria and related organisms. Journal of General and Applied Microbiology 22:203–214
    [Google Scholar]
  38. Yamada Y., Ishikawa T., Tahara Y., Kondo K. 1977; The menaquinone system in the classification of the genus Nocardia. Journal of General and Applied Microbiology 23:207–216
    [Google Scholar]
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