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Volume 9, Issue 9

Complex evolutionary history of photosynthesis in Open Access

Abstract

comprises a diverse group of bacteria with various lifestyles. Although best known for their nodule-based nitrogen-fixation in symbiosis with legumes, a select group of bradyrhizobia are also capable of photosynthesis. This ability seems to be rare among rhizobia, and its origin and evolution in these bacteria remain a subject of substantial debate. Therefore, our aim here was to investigate the distribution and evolution of photosynthesis in using comparative genomics and representative genomes from closely related taxa in the families and . We identified photosynthesis gene clusters (PGCs) in 25 genomes belonging to three different lineages, notably the so-called Photosynthetic, and supergroups. Also, two different PGC architectures were observed. One of these, PGC1, was present in genomes from the Photosynthetic supergroup and in three genomes from a species in the supergroup. The second cluster, PGC2, was also present in some strains from the supergroup, as well as in those from the supergroup. PGC2 was largely syntenic to the cluster found in and . Bayesian ancestral state reconstruction unambiguously showed that the ancestor of lacked a PGC and that it was acquired horizontally by various lineages. Maximum-likelihood phylogenetic analyses of individual photosynthesis genes also suggested multiple acquisitions through horizontal gene transfer, followed by vertical inheritance and gene losses within the different lineages. Overall, our findings add to the existing body of knowledge on ’s evolution and provide a meaningful basis from which to explore how these PGCs and the photosynthesis itself impact the physiology and ecology of these bacteria.

  • Received:
  • Accepted:
  • Published Online:
Keyword(s): Bradyrhizobium , comparative genomics , photosynthesis gene cluster , phylogenetics and synteny
Funding
This study was supported by the:
  • DST-NRF Centre Of Excellence In Tree Health Biotechnology (Award 40945)
    • Principle Award Recipient: EmmaT. Steenkamp
© 2023 The Authors
  • This is an open-access article distributed under the terms of the Creative Commons Attribution License.
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2023-09-07
2024-12-04
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Complex evolutionary history of photosynthesis in Bradyrhizobium
M Gen 9, 001105 (2023); https://doi.org/10.1099/mgen.0.001105
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