Unusual pathogenic B1 genotype (yjaA/TspE4.C2) detected among Escherichia coli from pig, chicken broiler meat and human extraintestinal infection

References

1. Aarestrup F. M., Wiuff C., Mølbak K., Threlfall E. J. 2003; Is it time to change fluoroquinolone breakpoints for Salmonella spp.?. Antimicrob Agents Chemother 47:827–829 [View Article][PubMed]
   [Google Scholar]
2. Ahmed W., Hodgers L., Masters N., Sidhu J. P. S., Katouli M., Toze S. 2011; Occurrence of intestinal and extraintestinal virulence genes in Escherichia coli isolates from rainwater tanks in Southeast Queensland, Australia. Appl Environ Microbiol 77:7394–7400 [View Article][PubMed]
   [Google Scholar]
3. Asai T., Masani K., Sato C., Hiki M., Usui M., Baba K., Ozawa M., Harada K., Aoki H., Sawada T. 2011; Phylogenetic groups and cephalosporin resistance genes of Escherichia coli from diseased food-producing animals in Japan. Acta Vet Scand 53:52 [View Article][PubMed]
   [Google Scholar]
4. Clermont O., Bonacorsi S., Bingen E. 2000; Rapid and simple determination of the Escherichia coli phylogenetic group. Appl Environ Microbiol 66:4555–4558 [View Article][PubMed]
   [Google Scholar]
5. DANMAP 2004; Use of antimicrobial agents and occurrence of antimicrobial resistance in bacteria from food animals, food and humans in Denmark. ISSN 1600-2032 http://www.danmap.org
6. Ejrnæs K., Stegger M., Reisner A., Ferry S., Monsen T., Holm S. E., Lundgren B., Frimodt-Møller N. 2011; Characteristics of Escherichia coli causing persistence or relapse of urinary tract infections: phylogenetic groups, virulence factors and biofilm formation. Virulence 2:528–537 [View Article][PubMed]
   [Google Scholar]
7. Foxman B., Riley L. 2001; Molecular epidemiology: focus on infection. Am J Epidemiol 153:1135–1141 [View Article][PubMed]
   [Google Scholar]
8. Gibreel T. M., Dodgson A. R., Cheesbrough J., Fox A. J., Bolton F. J., Upton M. 2012; Population structure, virulence potential and antibiotic susceptibility of uropathogenic Escherichia coli from northwest England. J Antimicrob Chemother 67:346–356 [View Article][PubMed]
   [Google Scholar]
9. Herzer P. J., Inouye S., Inouye M., Whittam T. S. 1990; Phylogenetic distribution of branched RNA-linked multicopy single-stranded DNA among natural isolates of Escherichia coli.. J Bacteriol 172:6175–6181[PubMed]
   [Google Scholar]
10. Hunter S. B., Vauterin P., Lambert-Fair M. A., Van Duyne M. S., Kubota K., Graves L., Wrigley D., Barrett T., Ribot E. 2005; Establishment of a universal size standard strain for use with the PulseNet standardized pulsed-field gel electrophoresis protocols: converting the national databases to the new size standard. J Clin Microbiol 43:1045–1050 [View Article][PubMed]
    [Google Scholar]
11. Jakobsen L., Hammerum A. M., Frimodt-Møller N. 2010a; Virulence of Escherichia coli B2 isolates from meat and animals in a murine model of ascending urinary tract infection (UTI): evidence that UTI is a zoonosis. J Clin Microbiol 48:2978–2980 [View Article][PubMed]
    [Google Scholar]
12. Jakobsen L., Kurbasic A., Skjøt-Rasmussen L., Ejrnaes K., Porsbo L. J., Pedersen K., Jensen L. B., Emborg H. D., Agersø Y. other authors 2010b; Escherichia coli isolates from broiler chicken meat, broiler chickens, pork, and pigs share phylogroups and antimicrobial resistance with community-dwelling humans and patients with urinary tract infection. Foodborne Pathog Dis 7:537–547 [View Article][PubMed]
    [Google Scholar]
13. Johnson J. R., Russo T. A. 2002; Extraintestinal pathogenic Escherichia coli: “the other bad E coli”. J Lab Clin Med 139:155–162 [View Article][PubMed]
    [Google Scholar]
14. Johnson J. R., Kuskowski M. A., O’bryan T. T., Colodner R., Raz R. 2005; Virulence genotype and phylogenetic origin in relation to antibiotic resistance profile among Escherichia coli urine sample isolates from Israeli women with acute uncomplicated cystitis. Antimicrob Agents Chemother 49:26–31 [View Article][PubMed]
    [Google Scholar]
15. Lukjancenko O., Wassenaar T. M., Ussery D. W. 2010; Comparison of 61 sequenced Escherichia coli genomes. Microb Ecol 60:708–720 [View Article][PubMed]
    [Google Scholar]
16. Markovska R., Schneider I., Ivanova D., Keuleyan E., Stoeva T., Sredkova M., Markova B., Bojkova K., Gergova R. other authors 2012; High prevalence of CTX-M-15-producing O25b-ST131 Escherichia coli clone in Bulgarian hospitals. Microb Drug Resist 18:390–395 [View Article][PubMed]
    [Google Scholar]
17. Mendonça N., Calhau V., Lin T., Boaventura L., Ribeiro G., Da Silva G. J. 2011; Unusual genotype of a uropathogenic Escherichia coli strain assigned to the B2 phylogenetic group. J Clin Microbiol 49:3105–3106 [View Article][PubMed]
    [Google Scholar]
18. Moreno E., Prats G., Sabaté M., Pérez T., Johnson J. R., Andreu A. 2006; Quinolone, fluoroquinolone and trimethoprim/sulfamethoxazole resistance in relation to virulence determinants and phylogenetic background among uropathogenic Escherichia coli.. J Antimicrob Chemother 57:204–211 [View Article][PubMed]
    [Google Scholar]
19. Ribot E. M., Fair M. A., Gautom R., Cameron D. N., Hunter S. B., Swaminathan B., Barrett T. J. 2006; Standardization of pulsed-field gel electrophoresis protocols for the subtyping of Escherichia coli O157:H7, Salmonella, and Shigella for PulseNet. Foodborne Pathog Dis 3:59–67 [View Article][PubMed]
    [Google Scholar]
20. Rosen D. A., Hooton T. M., Stamm W. E., Humphrey P. A., Hultgren S. J. 2007; Detection of intracellular bacterial communities in human urinary tract infection. PLoS Med 4:e329 [View Article][PubMed]
    [Google Scholar]
21. Selander R. K., Caugant D. A., Ochman H., Musser J. M., Gilmour M. N., Whittam T. S. 1986; Methods of multilocus enzyme electrophoresis for bacterial population genetics and systematics. Appl Environ Microbiol 51:873–884[PubMed]
    [Google Scholar]
22. Skjøt-Rasmussen L., Ejrnæs K., Lundgren B., Hammerum A. M., Frimodt-Møller N. 2012; Virulence factors and phylogenetic grouping of Escherichia coli isolates from patients with bacteraemia of urinary tract origin relate to sex and hospital- vs. community-acquired origin. Int J Med Microbiol 302:129–134 [View Article][PubMed]
    [Google Scholar]
23. Tenover F. C., Arbeit R. D., Goering R. V., Mickelsen P. A., Murray B. E., Persing D. H., Swaminathan B. 1995; Interpreting chromosomal DNA restriction patterns produced by pulsed-field gel electrophoresis: criteria for bacterial strain typing. J Clin Microbiol 33:2233–2239[PubMed]
    [Google Scholar]
24. Tian G.-B., Rivera J. I., Park Y. S., Johnson L. E., Hingwe A., Adams-Haduch J. M., Doi Y. 2011; Sequence type ST405 Escherichia coli isolate producing QepA1, CTX-M-15, and RmtB from Detroit, Michigan. Antimicrob Agents Chemother 55:3966–3967 [View Article][PubMed]
    [Google Scholar]
25. Wirth T., Falush D., Lan R., Colles F., Mensa P., Wieler L. H., Karch H., Reeves P. R., Maiden M. C. other authors 2006; Sex and virulence in Escherichia coli: an evolutionary perspective. Mol Microbiol 60:1136–1151 [View Article][PubMed]
    [Google Scholar]