1887

Abstract

The COVID-19 pandemic demonstrated a need for robust SARS-CoV-2 test evaluation infrastructure to underpin biosecurity and protect the population during a pandemic health emergency.

The first generation of rapid antigen tests was less accurate than molecular methods due to their inherent sensitivity and specificity shortfalls, compounded by the consequences of self-testing. This created a need for more accurate point-of-care SARS-CoV-2 detection methods.

Here we present the lessons-learned during the COVID-19 emergency response in Western Australia including the detailed set-up, evaluation and operation of rapid antigen test in a state-run drive-through sample collection service during the COVID-19 pandemic after the strict border shutdown ended.

We report a conformity assessment of a novel, second-generation rapid antigen test (Virulizer) comprising a technician-operated rapid lateral flow immunoassay with fluorescence-based detection.

The Virulizer rapid antigen test demonstrated up to 100% sensitivity (95% CI: 61.0–100%), 91.94% specificity (95% CI: 82.5–96.5%) and 92.65% accuracy when compared to a commercial PCR assay method. Wide confidence intervals in our series reflect the limits of small sample size. Nevertheless, the Virulizer assay performance was well-suited to point-of-care screening for SARS-CoV-2 in a drive-through clinic setting.

The adaptive evaluation process necessary under changing pandemic conditions enabled assessment of a simple sample collection and point-of-care testing process, and showed how this system could be rapidly deployed for SARS-CoV-2 testing, including to regional and remote settings.

Funding
This study was supported by the:
  • Western Australian Future Health and Innovation Fund, Government of Western Australia (Award (2021/GR001301).)
    • Principle Award Recipient: TimJJ Inglis
  • National Health and Medical Research Council (Award (2021/GNT2012074).)
    • Principle Award Recipient: TimJJ Inglis
  • This is an open-access article distributed under the terms of the Creative Commons Attribution License. This article was made open access via a Publish and Read agreement between the Microbiology Society and the corresponding author’s institution.
Loading

Article metrics loading...

/content/journal/jmm/10.1099/jmm.0.001875
2024-09-02
2024-09-18
Loading full text...

Full text loading...

/deliver/fulltext/jmm/73/9/jmm001875.html?itemId=/content/journal/jmm/10.1099/jmm.0.001875&mimeType=html&fmt=ahah

References

  1. WHO Coronavirus (COVID-19) Dashboard: World Health Organization; 2023 https://covid19.who.int accessed 4 January 2024
  2. Regional population Canberra: Australian Bureau of Statistics; 2022 https://www.abs.gov.au/statistics/people/population/regional-population/2021-22 accessed 4 January 2024
  3. Confirmed COVID-19 cases: 7-day average; 2023 https://www.covid19data.com.au/ accessed 4 January 2024
  4. Kwon KT, Ko JH, Shin H, Sung M, Kim JY. Drive-through screening center for COVID-19: a safe and efficient screening system against massive community outbreak. J Korean Med Sci 2020; 35:e123 [View Article] [PubMed]
    [Google Scholar]
  5. Weiss EA, Ngo J, Gilbert GH, Quinn JV. Drive-through medicine: a novel proposal for rapid evaluation of patients during an influenza pandemic. Ann Emerg Med 2010; 55:268–273 [View Article] [PubMed]
    [Google Scholar]
  6. Revised testing framework for COVID-19 in Australia. Communicable Diseases Network of Australia, Public Health Laboratory Network; 2022 https://www.health.gov.au/resources/publications/coronavirus-covid-19-testing-framework-for-covid-19-in-australia?language=en] accessed 4 January 2024
  7. Shores EA, Berry J. Diagnostic accuracy of thirteen COVID-19 (SARS-CoV-2) rapid antigen self-tests with very high sensitivity approved for home use in Australia. Aust N Z J Public Health 2022; 46:722–723 [View Article] [PubMed]
    [Google Scholar]
  8. Vilela ACS, Costa CA, Oliveira SA, Souza MBLD, Fiaccadori FS et al. Validity and reliability of immunochromatographic IgM/IgG rapid tests for COVID-19 salivary diagnosis. Oral Dis 2022; 28 Suppl 2:2465–2473 [View Article] [PubMed]
    [Google Scholar]
  9. Scohy A, Anantharajah A, Bodéus M, Kabamba-Mukadi B, Verroken A et al. Low performance of rapid antigen detection test as frontline testing for COVID-19 diagnosis. J Clin Virol 2020; 129:104455 [View Article] [PubMed]
    [Google Scholar]
  10. Asare BY-A, Thomas E, Affandi JS, Schammer M, Brown P et al. Mental well-being during COVID-19: a cross-sectional study of fly-in fly-out workers in the mining industry in Australia. Int J Environ Res Public Health 2021; 18:18 [View Article] [PubMed]
    [Google Scholar]
  11. Dodd RH, Dadaczynski K, Okan O, McCaffery KJ, Pickles K. Psychological wellbeing and academic experience of university students in Australia during COVID-19. Int J Environ Res Public Health 2021; 18:18 [View Article] [PubMed]
    [Google Scholar]
  12. Asare BY-A, Thomas E, Affandi JS, Schammer M, Harris C et al. Multiple health-related behaviours among fly-in fly-out workers in the mining industry in Australia: a cross-sectional survey during the COVID-19 pandemic. PLoS One 2022; 17:e0275008 [View Article] [PubMed]
    [Google Scholar]
  13. Rational use of personal protective equipment for coronavirus disease (COVID-19) and considerations during severe shortages. Contract No.: WHO/2019-nCoV/IPC_PPE_use/2020.4; 2020 accessed 4 January 2024
  14. Boan P, Jardine A, Pryce TM. Clinical associations of SARS-CoV-2 viral load using the first WHO International Standard for SARS-CoV-2 RNA. Pathology 2022; 54:344–350 [View Article] [PubMed]
    [Google Scholar]
  15. Pryce TM, Boan PA, Kay ID, Flexman JP. Thermal treatment of nasopharyngeal samples before cobas SARS-CoV-2 testing. Clin Microbiol Infect 2021; 27:149–150 [View Article] [PubMed]
    [Google Scholar]
  16. He H, Liu B, Wen S, Liao J, Lin G et al. Quantitative lateral flow strip sensor using highly doped upconversion nanoparticles. Anal Chem 2018; 90:12356–12360 [View Article] [PubMed]
    [Google Scholar]
  17. Sachs JD, Karim SSA, Aknin L, Allen J, Brosbøl K et al. The Lancet Commission on lessons for the future from the COVID-19 pandemic. Lancet 2022; 400:1224–1280 [View Article] [PubMed]
    [Google Scholar]
  18. Radonovich LJ, Cheng J, Shenal BV, Hodgson M, Bender BS. Respirator tolerance in health care workers. JAMA 2009; 301:36–38 [View Article] [PubMed]
    [Google Scholar]
  19. Wölfl-Duchek M, Bergmann F, Jorda A, Weber M, Müller M et al. Sensitivity and specificity of SARS-CoV-2 rapid antigen detection tests using oral, anterior nasal, and nasopharyngeal swabs: a diagnostic accuracy study. Microbiol Spectr 2022; 10:e0202921 [View Article] [PubMed]
    [Google Scholar]
  20. Crouch DJ. Oral fluid collection: the neglected variable in oral fluid testing. Forensic Sci Int 2005; 150:165–173 [View Article] [PubMed]
    [Google Scholar]
  21. Ogawa T, Fukumori T, Nishihara Y, Sekine T, Okuda N et al. Another false-positive problem for a SARS-CoV-2 antigen test in Japan. J Clin Virol 2020; 131:104612 [View Article] [PubMed]
    [Google Scholar]
/content/journal/jmm/10.1099/jmm.0.001875
Loading
/content/journal/jmm/10.1099/jmm.0.001875
Loading

Data & Media loading...

Supplements

Supplementary material 1

PDF
This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error