Control of ruminant morbillivirus replication by small interfering RNA

References

1. Amarzguioui M., Prydz H. 2004; An algorithm for selection of functional siRNA sequences. Biochem Biophys Res Commun 316:1050–1058 [CrossRef]
   [Google Scholar]
2. Barik S. 2004; Control of nonsegmented negative-strand RNA virus replication by siRNA. Virus Res 102:27–35 [CrossRef]
   [Google Scholar]
3. Far R. K.-K., Sczakiel G. 2003; The activity of siRNA in mammalian cells is related to structural target accessibility: a comparison with antisense oligonucleotides. Nucleic Acids Res 31:4417–4424 [CrossRef]
   [Google Scholar]
4. Fire A., Xu S., Montgomery M. K., Kostas S. A., Driver S. E., Mello C. C. 1998; Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans . Nature 391:806–811 [CrossRef]
   [Google Scholar]
5. Gargadennec L., Lalanne A. 1942; La peste des petits ruminants. Bull Serv Zootechnol Epizoot Afr Occid 5:16–21 (in French
   [Google Scholar]
6. Hammond S. M., Caudy A. A., Hannon G. J. 2001; Post-transcriptional gene silencing by double-stranded RNA. Nat Rev Genet 2:110–119 [CrossRef]
   [Google Scholar]
7. Hannon G. J. 2002; RNA interference. Nature 418:244–251 [CrossRef]
   [Google Scholar]
8. Heale B. S. E., Soifer H. S., Bowers C., Rossi J. J. 2005; siRNA target site secondary structure predictions using local stable substructures. Nucleic Acids Res 33:e30 [CrossRef]
   [Google Scholar]
9. Huesken D., Lange J., Mickanin C., Weiler J., Asselbergs F., Warner J., Meloon B., Engel S., Rosenberg A. other authors 2005; Design of a genome-wide siRNA library using an artificial neural network. Nat Biotechnol 23:995–1001 [CrossRef]
   [Google Scholar]
10. Hutvagner G. 2005; Small RNA asymmetry in RNAi: function in RISC assembly and gene regulation. FEBS Lett 579:5850–5857 [CrossRef]
    [Google Scholar]
11. Jagla B., Aulner N., Kelly P. D., Song D., Volchuk A., Zatorski A., Shum D., Mayer T., Angelis D. other authors 2005; Sequence characteristics of functional siRNAs. RNA 11:864–872 [CrossRef]
    [Google Scholar]
12. Khvorova A., Reynolds A., Jayasena S. D. 2003; Functional siRNAs and miRNAs exhibit strand bias. Cell 115:209–216 [CrossRef]
    [Google Scholar]
13. Lamb R. A., Parks G. D. 2007; Paramyxoviridae : the viruses and their replication. In Fields Virology, 5th edn. vol 1 pp 1449–1496 Philadelphia, PA: Lippincott Williams & Wilkins;
    [Google Scholar]
14. Lefèvre P. C., Diallo A. 1991; Peste des petits ruminants. Rev Sci Tech O I E (Off Int Epizoot) 9:951–965 (in French
    [Google Scholar]
15. Pekarik V. 2005; Design of shRNA for RNAi – a lesson from pre-miRNA processing: possible clinical applications. Brain Res Bull 68:115–120 [CrossRef]
    [Google Scholar]
16. Reed L. J., Muench H. A. A. 1938; A simple method of estimating fifty percent endpoints. Am J Trop Med Hyg 27:493–497
    [Google Scholar]
17. Reynolds A., Leake D., Boese Q., Scaringe S., Marshall W. S., Khvorova A. 2004; Rational siRNA design for RNA interference. Nat Biotechnol 22:326–330 [CrossRef]
    [Google Scholar]
18. Rweyemamu M. M., Cheneau Y. 1995; Strategy for the global rinderpest eradication programme. Vet Microbiol 44:369–376 [CrossRef]
    [Google Scholar]
19. Schubert S., Grünweller A., Erdmann V. A., Kurreck J. 2005; Local RNA target structure influences siRNA efficacy: systematic analysis of intentionally designed binding regions. J Mol Biol 348:883–893 [CrossRef]
    [Google Scholar]
20. Schwarz D. S., Hutvágner G., Du T., Xu Z., Aronin N., Zamore P. D. 2003; Asymmetry in the assembly of the RNAi enzyme complex. Cell 115:199–208 [CrossRef]
    [Google Scholar]
21. Shabalina S., Spiridonov A. N., Ogurstov A. Y. 2006; Computational models with thermodynamic and composition features improve siRNA design. BMC Bioinformatics 7:65 [CrossRef]
    [Google Scholar]
22. Shaila M. S., Shamaki D., Forsyth M. A., Diallo A., Goatley L., Kitching R. P., Barrett T. 1996; Geographic distribution and epidemiology of peste des petits ruminants viruses. Virus Res 43:149–153 [CrossRef]
    [Google Scholar]
23. Ui-Tei K., Naito Y., Takahashi F., Haragushi T., Ohki-Hamazaki H., Juni A., Ueda R., Saigo K. 2004; Guidelines for the selection of highly effective siRNA sequences for mammalian and chick RNA interference. Nucleic Acids Res 32:936–948 [CrossRef]
    [Google Scholar]
24. Yoshinari K., Miyagishi M., Taira K. 2004; Effects on RNAi of the tight structure, sequence and position of the targeted region. Nucleic Acids Res 32:691–699 [CrossRef]
    [Google Scholar]