Molecular-based reclassification of the bovine enteroviruses

References

1. Adachi J., Hasegawa M. 1992; Amino acid substitution of proteins coded for in mitochondrial DNA during mammalian evolution. Jpn J Genet 67:187–197 [CrossRef]
   [Google Scholar]
2. Andersson P., Edman K., Lindberg A. M. 2002; Molecular analysis of the echovirus 18 prototype: evidence of interserotypic recombination with echovirus 9. Virus Res 85:71–83 [CrossRef]
   [Google Scholar]
3. Barya M. A., Moll T., Mattson D. E. 1967; Antigenic analysis of bovine enteroviruses through studies of kinetics of neutralization. Am J Vet Res 28:1283–1294
   [Google Scholar]
4. Brown B., Oberste M. S., Maher K., Pallansch M. A. 2003; Complete genomic sequencing shows that polioviruses and members of human enterovirus species C are closely related in the noncapsid coding region. J Virol 77:8973–8984 [CrossRef]
   [Google Scholar]
5. Cammack N., Phillips A., Dunn G., Patel V., Minor P. D. 1988; Intertypic genomic rearrangements of poliovirus strains in vaccines. Virology 167:507–514 [CrossRef]
   [Google Scholar]
6. Dunne H. W., Huang C. M., Lin W. J. 1974; Bovine enteroviruses in the calf: an attempt at serologic, biologic, and pathologic classification. J Am Vet Med Assoc 164:290–294
   [Google Scholar]
7. Earle J. A. P., Skuce R. A., Fleming C. S., Hoey E. M., Martin S. J. 1988; The complete nucleotide sequence of a bovine enterovirus. J Gen Virol 69:253–263 [CrossRef]
   [Google Scholar]
8. Felsenstein J. 1995 phylip: phylogeny inference package, version 3.57c University of Washington; Seattle, WA:
   [Google Scholar]
9. Goens S. D., Botero S., Zemla A., Zhou C. E., Perdue M. L. 2004; Bovine enterovirus 2: complete genomic sequence and molecular modelling of a reference strain and a wild-type isolate from endemically infected US cattle. J Gen Virol 85:3195–3203 [CrossRef]
   [Google Scholar]
10. Huck R. A., Cartwright S. F. 1964; Isolation and classification of viruses from cattle during outbreaks of mucosal or respiratory disease and from herds with reproductive disorders. J Comp Pathol 74:346–365 [CrossRef]
    [Google Scholar]
11. Jones D. T., Taylor W. R., Thornton J. M. 1992; The rapid generation of mutation data matrices from protein sequences. Comput Appl Biosci 8:275–282
    [Google Scholar]
12. King A. M. Q., Brown F., Christian P. & 8 other authors 2000; Picornaviridae . In Virus Taxonomy. Seventh Report of the International Committee for the Taxonomy of Viruses . , 7th edn. pp  657–678 Edited by Regenmortel M. H. V. Van, Fauquet C. M., Bishop D. H. L., Calisher C. H., Carsten E. B., Estes M. K., Lemon S. M., Maniloff J., Mayo M. A., McGeoch D. J., Pringle C. R., Wickner R. B. New York, San Diego: Academic Press;
13. Knowles N. J., Barnett I. T. 1985; A serological classification of bovine enteroviruses. Arch Virol 83:141–155 [CrossRef]
    [Google Scholar]
14. Krumbholz A., Dauber M., Henke A., Birch-Hirschfeld E., Knowles N. J., Stelzner A., Zell R. 2002; Sequencing of porcine enterovirus groups II and III reveals unique features of both virus groups. J Virol 76:5813–5821 [CrossRef]
    [Google Scholar]
15. Kunin C. M., Minuse E. 1958; The isolation in tissue culture, chick embryo and suckling mice of filtrable agents from healthy dairy cattle. J Immunol 80:1–11
    [Google Scholar]
16. Lindberg A. M., Andersson P., Savolainen C., Mulders M. N., Hovi T. 2003; Evolution of the genome of Human enterovirus B : incongruence between phylogenies of the VP1 and 3CD regions indicates frequent recombination within the species. J Gen Virol 84:1223–1235 [CrossRef]
    [Google Scholar]
17. Lipskaya G. Y., Muzychenko A. R., Kutitova O. K., Maslova S. V., Equestre M., Drozdov S. G., Perez Bercoff R. P., Agol V. I. 1991; Frequent isolation of intertypic poliovirus recombinants with serotype 2 specificity from vaccine-associated polio cases. J Med Virol 35:290–296 [CrossRef]
    [Google Scholar]
18. McCarthy F. M., Smith G. A., Mattick J. S. 1999; Molecular characterisation of Australian bovine enteroviruses. Vet Microbiol 68:71–81 [CrossRef]
    [Google Scholar]
19. McFerran J. B. 1958; ECBO viruses of cattle. Vet Rec 70:999
    [Google Scholar]
20. McNally R. M., Earle J. A., McIlhatton M., Hoey E. M., Martin S. J. 1994; The nucleotide sequence of the 5′ non-coding and capsid coding genome regions of two bovine enterovirus strains. Arch Virol 139:287–299 [CrossRef]
    [Google Scholar]
21. Moll T., Davis A. D. 1959; Isolation and characterization of cytopathogenic enteroviruses from cattle with respiratory disease. Am J Vet Res 20:27–32
    [Google Scholar]
22. Moll T., Ulrich M. I. 1963; Biologic characteristics of certain bovine enteric viruses. Am J Vet Res 24:545–550
    [Google Scholar]
23. Möller W., Amons R. 1985; Phosphate-binding sequences in nucleotide-binding proteins. FEBS Lett 186:1–7 [CrossRef]
    [Google Scholar]
24. Santti J., Hyypiä T., Kinnunen L., Salminen M. 1999; Evidence of recombination among enteroviruses. J Virol 73:8741–8749
    [Google Scholar]
25. Stanway G., Brown F., Christian P. & 9 other authors 2005; Picornaviridae . In Virus Taxonomy, Eighth Report of the International Committee on Taxonomy of Viruses . , 8th edn. pp  757–778 Edited by Fauquet C. M., Mayo M. A., Maniloff J., Desselberger U., Ball L. A. London: Elsevier/Academic Press;
26. Strimmer K., von Haeseler A. 1996; Quartet puzzling: a quartet maximum likelihood method for reconstructing tree topologies. Mol Biol Evol 13:964–969 [CrossRef]
    [Google Scholar]
27. Strimmer K., Goldman N., von Haeseler A. 1997; Bayesian probabilities and quartet puzzling. Mol Biol Evol 14:210–211 [CrossRef]
    [Google Scholar]
28. Tamura K., Nei M. 1993; Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol Biol Evol 10:512–526
    [Google Scholar]
29. Thompson J. D., Higgins D. G., Gibson T. J. 1994; clustal w: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673–4680 [CrossRef]
    [Google Scholar]
30. Van Regenmortel M. H. V., Bishop D. H. L., Fauquet C. M., Mayo M. A., Maniloff J., Calisher C. H. 1997; Guidelines to the demarcation of virus species. Arch Virol 142:1505–1518
    [Google Scholar]
31. Zell R., Stelzner A. 1997; Application of genome sequence information to the classification of bovine enteroviruses: the importance of 5′- and 3′-nontranslated regions. Virus Res 51:213–229 [CrossRef]
    [Google Scholar]
32. Zell R., Sidigi K., Henke A., Schmidt-Brauns J., Hoey E., Martin S., Stelzner A. 1999; Functional features of the bovine enteroviral 5′-nontranslated region. J Gen Virol 80:2299–2310
    [Google Scholar]
33. Zell R., Dauber M., Krumbholz A., Henke A., Birch-Hirschfeld E., Stelzner A., Prager D., Wurm R. 2001; Porcine teschoviruses comprise at least eleven distinct serotypes: molecular and evolutionary aspects. J Virol 75:1620–1631 [CrossRef]
    [Google Scholar]
34. Zhang A. Q., Burgess G. W. 1986; Serotyping bovine enteroviruses in Queensland. In Proceedings of the 5th International conference on Livestock Production and Diseases in the Tropics Kuala Lumpur, Malaysia:
    [Google Scholar]
35. Zuker M., Mathews D. H., Turner D. H. 1999; Algorithms and thermodynamics for RNA secondary structure prediction: a practical guide. In RNA Biochemistry and Biotechnology . NATO ASI Series pp  11–43 Edited by Barciszewski C. J., Clark B. F. Kluwer Academic Publishers;
    [Google Scholar]