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Volume 91, Issue 10

Prevalence and genetic diversity of adeno-associated viruses in bats from China Free

Abstract

Bats are increasingly being recognized as important natural reservoirs of different viruses. Adeno-associated viruses (AAVs) are widely distributed in primates and their distribution in bats is unknown. In this study, a total of 370 faecal swab samples from 19 bat species were collected from various provinces of China and examined for the presence of AAVs. The mean prevalence rate was 22.4 % (83 positives out of 370 samples), ranging from 10 to 38.9 % among different bat species. The genome sequence spanning the entire ORFs was determined from one chosen AAV-positive sample (designated BtAAV-YNM). Phylogenetic analysis of the entire ORF coding sequences suggested that BtAAV-YNM is relatively distant to known primate AAVs, but phylogenetically closer to porcine AAV strain Po3. Further analysis of the partial ORF sequences of bat AAV samples (=49) revealed a remarkably large genetic diversity, with an average pairwise nucleotide identity of only 84.3 %. Co-presence of multiple distinctive genotypes of bat AAV within an individual sample was also observed. These results demonstrated that diverse AAVs might be widely distributed in bat populations.

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2010-10-01
2024-04-25
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Prevalence and genetic diversity of adeno-associated viruses in bats from China
J. Gen. Virol. 91, 2601 (2010); https://doi.org/10.1099/vir.0.020032-0
/content/journal/jgv/10.1099/vir.0.020032-0
/content/journal/jgv/10.1099/vir.0.020032-0
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Supplements

vol. , part 10, pp. 2601 - 2609

Similarity of Rep and Cap proteins between BtAAV-YNM and other AAVs

Similarity plot of genomes between BtAAV-YNM and other AAVs

Large-scale maximum-likelihood (ML) phylogeny of all available and relevant AAVs [Single PDF file](251 KB)

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