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Abstract

Previously, we reported that a new genetically diverse CCR5 (R5) tropic simian/human immunodeficiency virus (SHIV-MK38) adapted to rhesus monkeys became more neutralization resistant to SHIV-infected plasma than did the parental SHIV-KS661 clone. Here, to clarify the significance of the neutralization-resistant phenotype of SHIV in a macaque model, we initially investigated the precise neutralization phenotype of the SHIVs, including SHIV-MK38 molecular clones, using SHIV-MK38-infected plasma, a pooled plasma of human immunodeficiency virus (HIV)-infected individuals, soluble CD4 and anti-HIV-1 neutralizing mAbs, the epitopes of which were known. The results show that SHIV-KS661 had tier 1 neutralization sensitivity, but monkey-adapted R5 tropic SHIV-MK38 acquired neutralization resistance similar to that of tier 2 or 3 as a clone virus. Sequence analysis of the gene suggested that the neutralization-resistant phenotype of SHIV-MK38 was acquired by conformational changes in Env associated with the net charge and potential -linked glycosylation sites. To examine the relationship between neutralization phenotype and stably persistent infection in monkeys, we performed rectal inoculation experiments using a SHIV-MK38 molecular clone. The results showed that one of three rhesus monkeys exhibited durable infection with a plasma viral load of 10 copies ml despite the high antibody responses that occurred in the host. Whilst further improvements are required in the development of a challenge virus, it will be useful to generate a neutralization-resistant R5 tropic molecular clone of the SHIV-89.6 lineage commonly used for vaccine development – a result that can be used to explore the foundation of AIDS pathogenesis.

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/content/journal/jgv/10.1099/jgv.0.000421
2016-05-01
2026-03-13

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References

  1. Boyd D. F., Peterson D., Haggarty B. S., Jordan A. P., Hogan M. J., Goo L., Hoxie J. A., Overbaugh J. 2015; Mutations in HIV-1 envelope that enhance entry with the macaque CD4 receptor alter antibody recognition by disrupting quaternary interactions within the trimer. J Virol 89:894–907 [View Article][PubMed]
    [Google Scholar]
  2. Buchbinder S. P., Mehrotra D. V., Duerr A., Fitzgerald D. W., Mogg R., Li D., Gilbert P. B., Lama J. R., Marmor M., other authors. 2008; Efficacy assessment of a cell-mediated immunity HIV-1 vaccine (the Step Study): a double-blind, randomised, placebo-controlled, test-of-concept trial. Lancet 372:1881–1893 [View Article][PubMed]
    [Google Scholar]
  3. Cardozo T., Kimura T., Philpott S., Weiser B., Burger H., Zolla-Pazner S. 2007; Structural basis for coreceptor selectivity by the HIV type 1 V3 loop. AIDS Res Hum Retroviruses 23:415–426 [View Article][PubMed]
    [Google Scholar]
  4. Casimiro D. R., Wang F., Schleif W. A., Liang X., Zhang Z.-Q., Tobery T. W., Davies M.-E., McDermott A. B., O'Connor D. H., other authors. 2005; Attenuation of simian immunodeficiency virus SIVmac239 infection by prophylactic immunization with DNA and recombinant adenoviral vaccine vectors expressing Gag. J Virol 79:15547–15555 [View Article][PubMed]
    [Google Scholar]
  5. DuBridge R. B., Tang P., Hsia H. C., Leong P. M., Miller J. H., Calos M. P. 1987; Analysis of mutation in human cells by using an Epstein-Barr virus shuttle system. Mol Cell Biol 7:379–387 [View Article][PubMed]
    [Google Scholar]
  6. Eda Y., Takizawa M., Murakami T., Maeda H., Kimachi K., Yonemura H., Koyanagi S., Shiosaki K., Higuchi H., other authors. 2006; Sequential immunization with V3 peptides from primary human immunodeficiency virus type 1 produces cross-neutralizing antibodies against primary isolates with a matching narrow-neutralization sequence motif. J Virol 80:5552–5562 [View Article][PubMed]
    [Google Scholar]
  7. Etemad-Moghadam B., Sun Y., Nicholson E. K., Fernandes M., Liou K., Gomila R., Lee J., Sodroski J. 2000; Envelope glycoprotein determinants of increased fusogenicity in a pathogenic simian-human immunodeficiency virus (SHIV-KB9) passaged in vivo . J Virol 74:4433–4440 [View Article][PubMed]
    [Google Scholar]
  8. Fouchier R. A., Groenink M., Kootstra N. A., Tersmette M., Huisman H. G., Miedema F., Schuitemaker H. 1992; Phenotype-associated sequence variation in the third variable domain of the human immunodeficiency virus type 1 gp120 molecule. J Virol 66:3183–3187[PubMed]
    [Google Scholar]
  9. Francica J. R., Sheng Z., Zhang Z., Nishimura Y., Shingai M., Ramesh A., Keele B. F., Schmidt S. D., Flynn B. J., other authors. 2015; Analysis of immunoglobulin trascripts and hypermutation following SHIVAD8 infection and protein-plus-adjuvant immunization. Nat Commun 6:6565 [View Article]
    [Google Scholar]
  10. Fukazawa Y., Miyake A., Ibuki K., Inaba K., Saito N., Motohara M., Horiuchi R., Himeno A., Matsuda K. other authors 2008; Small intestine CD4+ T cells are profoundly depleted during acute simian-human immunodeficiency virus infection, regardless of viral pathogenicity. J Virol 82:6039–6044 [View Article][PubMed]
    [Google Scholar]
  11. Gardner M. R., Kattenhorn L. M., Kondur H. R., von Schaewen M., Dorfman T., Chiang J. J., Haworth K. G., Decker J. M., Alpert M. D., other authors. 2015; AAV-expressed eCD4-Ig provides durable protection from multiple SHIV challenges. Nature 519:87–91 [View Article][PubMed]
    [Google Scholar]
  12. Gautam R., Nishimura Y., Lee W. R., Donau O., Buckler-White A., Shingai M., Sadjadpour R., Schmidt S. D., LaBranche C. C., other authors. 2012; Pathogenicity and mucosal transmissibility of the R5-tropic simian/human immunodeficiency virus SHIVAD8 in rhesus macaques: implications for use in vaccine studies. J Virol 86:8516–8526 [View Article][PubMed]
    [Google Scholar]
  13. Hsu M., Harouse J. M., Gettie A., Buckner C., Blanchard J., Cheng-Mayer C. 2003; Increased mucosal transmission but not enhanced pathogenicity of the CCR5-tropic, simian AIDS-inducing simian/human immunodeficiency virus SHIV(SF162P3) maps to envelope gp120. J Virol 77:989–998 [View Article][PubMed]
    [Google Scholar]
  14. Inaba K., Fukazawa Y., Matsuda K., Himeno A., Matsuyama M., Ibuki K., Miura Y., Koyanagi Y., Nakajima A., other authors. 2010; Small intestine CD4+ cell reduction and enteropathy in simian/human immunodeficiency virus KS661-infected rhesus macaques in the presence of low viral load. J Gen Virol 91:773–781 [View Article][PubMed]
    [Google Scholar]
  15. Javaherian K., Langlois A. J., Schmidt S., Kaufmann M., Cates N., Langedijk J. P., Meloen R. H., Desrosiers R. C., Burns D. P., Bolognesi D. P. 1992; The principal neutralization determinant of simian immunodeficiency virus differs from that of human immunodeficiency virus type 1. Proc Natl Acad Sci U S A 89:1418–1422 [View Article][PubMed]
    [Google Scholar]
  16. Kawamura M., Ishizaki T., Ishimoto A., Shioda T., Kitamura T., Adachi A. 1994; Growth ability of human immunodeficiency virus type 1 auxiliary gene mutants in primary blood macrophage cultures. J Gen Virol 75:2427–2431 [View Article][PubMed]
    [Google Scholar]
  17. Kwong P. D., Mascola J. R., Nabel G. J. 2013; Broadly neutralizing antibodies and the search for an HIV-1 vaccine: the end of the beginning. Nat Rev Immunol 13:693–701 [View Article][PubMed]
    [Google Scholar]
  18. Letvin N. L., Mascola J. R., Sun Y., Gorgone D. A., Buzby A. P., Xu L., Yang Z.-Y., Chakrabarti B., Rao S. S. other authors 2006; Preserved CD4+ central memory T cells and survival in vaccinated SIV-challenged monkeys. Science 312:1530–1533 [View Article][PubMed]
    [Google Scholar]
  19. Matsuda K., Inaba K., Fukazawa Y., Matsuyama M., Ibuki K., Horiike M., Saito N., Hayami M., Igarashi T., Miura T. 2010 In vivo analysis of a new R5 tropic SHIV generated from the highly pathogenic SHIV-KS661, a derivative of SHIV-89.6. Virology 399:134–143 [View Article][PubMed]
    [Google Scholar]
  20. Mehandru S. 2007; The gastrointestinal tract in HIV-1 infection: questions, answers, and more questions!. The PRN Notebook 12 http://www.prn.org/index.php/progression/article/hiv_1_gastrointestinal_galt_267
    [Google Scholar]
  21. Miyake A., Ibuki K., Enose Y., Suzuki H., Horiuchi R., Motohara M., Saito N., Nakasone T., Honda M., other authors. 2006; Rapid dissemination of a pathogenic simian/human immunodeficiency virus to systemic organs and active replication in lymphoid tissues following intrarectal infection. J Gen Virol 87:1311–1320 [View Article][PubMed]
    [Google Scholar]
  22. Moore J. P., Cao Y., Qing L., Sattentau Q. J., Pyati J., Koduri R., Robinson J., Barbas C. F. III Burton D R & Ho D D 1995; Primary isolates of human immunodeficiency virus type 1 are relatively resistant to neutralization by monoclonal antibodies to gp120, and their neutralization is not predicted by studies with monomeric gp120. J Virol 69:101–109[PubMed]
    [Google Scholar]
  23. Naganawa S., Yokoyama M., Shiino T., Suzuki T., Ishigatsubo Y., Ueda A., Shirai A., Takeno M., Hayakawa S., other authors. 2008; Net positive charge of HIV-1 CRF01_AE V3 sequence regulates viral sensitivity to humoral immunity. PLoS One 3:e3206 [View Article][PubMed]
    [Google Scholar]
  24. Nishimura Y., Shingai M., Willey R., Sadjadpour R., Lee W. R., Brown C. R., Brenchley J. M., Buckler-White A., Petros R., other authors. 2010; Generation of the pathogenic R5-tropic simian/human immunodeficiency virus SHIVAD8 by serial passaging in rhesus macaques. J Virol 84:4769–4781 [View Article][PubMed]
    [Google Scholar]
  25. O'Brien W. A., Sumner-Smith M., Mao S.-H., Sadeghi S., Zhao J.-Q., Chen I. S. 1996; Anti-human immunodeficiency virus type 1 activity of an oligocationic compound mediated via gp120 V3 interactions. J Virol 70:2825–2831[PubMed]
    [Google Scholar]
  26. O'Connell R. J., Kim J. H., Corey L., Michael N. L. 2012; Human immunodeficiency virus vaccine trials. Cold Spring Harb Perspect Med 2:a007351[PubMed] [CrossRef]
    [Google Scholar]
  27. O'Doherty U., Swiggard W. J., Malim M. H. 2000; Human immunodeficiency virus type 1 spinoculation enhances infection through virus binding. J Virol 74:10074–10080 [View Article][PubMed]
    [Google Scholar]
  28. Otsuki H., Yoneda M., Igarashi T., Miura T. 2014; Generation of a monkey-tropic human immunodeficiency virus type 1 carrying env from a CCR5-tropic subtype C clinical isolate. Virology 460-461:1–10 [View Article][PubMed]
    [Google Scholar]
  29. Pitcher C. J., Hagen S. I., Walker J. M., Lum R., Mitchell B. L., Maino V. C., Axthelm M. K., Picker L. J. 2002; Development and homeostasis of T cell memory in rhesus macaque. J Immunol 168:29–43 [View Article][PubMed]
    [Google Scholar]
  30. Platt E. J., Wehrly K., Kuhmann S. E., Chesebro B., Kabat D. 1998; Effects of CCR5 and CD4 cell surface concentrations on infections by macrophagetropic isolates of human immunodeficiency virus type 1. J Virol 72:2855–2864[PubMed]
    [Google Scholar]
  31. Purtscher M., Trkola A., Gruber G., Buchacher A., Predl R., Steindl F., Tauer C., Berger R., Barrett N., other authors. 1994; A broadly neutralizing human monoclonal antibody against gp41 of human immunodeficiency virus type 1. AIDS Res Hum Retroviruses 10:1651–1658 [View Article][PubMed]
    [Google Scholar]
  32. Rasheed M., Bettadapura R., Bajaj C. 2015; Computational refinement and validation protocol for proteins with large variable regions applied to model HIV Env spike in CD4 and 17b bound state. Structure 23:1138–1149 [View Article][PubMed]
    [Google Scholar]
  33. Reimann K. A., Li J. T., Veazey R., Halloran M., Park I.-W., Karlsson G. B., Sodroski J., Letvin N. L. 1996; A chimeric simian/human immunodeficiency virus expressing a primary patient human immunodeficiency virus type 1 isolate env causes an AIDS-like disease after in vivo passage in rhesus monkeys. J Virol 70:6922–6928[PubMed]
    [Google Scholar]
  34. Reimann K. A., Parker R. A., Seaman M. S., Beaudry K., Beddall M., Peterson L., Williams K. C., Veazey R. S., Montefiori D. C., other authors. 2005; Pathogenicity of simian-human immunodeficiency virus SHIV-89.6P and SIVmac is attenuated in cynomolgus macaques and associated with early T-lymphocyte responses. J Virol 79:8878–8885 [View Article][PubMed]
    [Google Scholar]
  35. Repits J., Sterjovski J., Badia-Martinez D., Mild M., Gray L., Churchill M. J., Purcell D. F., Karlsson A., Albert J., other authors. 2008; Primary HIV-1 R5 isolates from end-stage disease display enhanced viral fitness in parallel with increased gp120 net charge. Virology 379:125–134 [View Article][PubMed]
    [Google Scholar]
  36. Sadjadpour R., Theodore T. S., Igarashi T., Donau O. K., Plishka R. J., Buckler-White A., Martin M. A. 2004; Induction of disease by a molecularly cloned highly pathogenic simian immunodeficiency virus/human immunodeficiency virus chimera is multigenic. J Virol 78:5513–5519 [View Article][PubMed]
    [Google Scholar]
  37. Seaman M. S., Janes H., Hawkins N., Grandpre L. E., Devoy C., Giri A., Coffey R. T., Harris L., Wood B., other authors. 2010; Tiered categorization of a diverse panel of HIV-1 Env pseudoviruses for assessment of neutralizing antibodies. J Virol 84:1439–1452 [View Article][PubMed]
    [Google Scholar]
  38. Shibata R., Kawamura M., Sakai H., Hayami M., Ishimoto A., Adachi A. 1991; Generation of a chimeric human and simian immunodeficiency virus infectious to monkey peripheral blood mononuclear cells. J Virol 65:3514–3520[PubMed]
    [Google Scholar]
  39. Shimizu Y., Okoba M., Yamazaki N., Goto Y., Miura T., Hayami M., Hoshino H., Haga T. 2006; Construction and in vitro characterization of a chimeric simian and human immunodeficiency virus with the RANTES gene. Microbes Infect 8:105–113 [View Article][PubMed]
    [Google Scholar]
  40. Shingai M., Donau O. K., Schmidt S. D., Gautam R., Plishka R. J., Buckler-White A., Sadjadpour R., Lee W. R., LaBranche C. C., other authors. 2012; Most rhesus macaques infected with the CCR5-tropic SHIVAD8 generate cross-reactive antibodies that neutralize multiple HIV-1 strains. Proc Natl Acad Sci U S A 109:19769–19774 [View Article][PubMed]
    [Google Scholar]
  41. Shingai M., Nishimura Y., Klein F., Mouquet H., Donau O. K., Plishka R., Buckler-White A., Seaman M., Piatak M. Jr., other authors. 2013; Antibody-mediated immunotherapy of macaques chronically infected with SHIV suppresses viraemia. Nature 503:277–280[PubMed]
    [Google Scholar]
  42. Shinohara K., Sakai K., Ando S., Ami Y., Yoshino N., Takahashi E., Someya K., Suzaki Y., Nakasone T., other authors. 1999; A highly pathogenic simian/human immunodeficiency virus with genetic changes in cynomolgus monkey. J Gen Virol 80:1231–1240 [View Article][PubMed]
    [Google Scholar]
  43. Shioda T., Oka S., Ida S., Nokihara K., Toriyoshi H., Mori S., Takebe Y., Kimura S., Shimada K., other authors. 1994; A naturally occurring single basic amino acid substitution in the V3 region of the human immunodeficiency virus type 1 env protein alters the cellular host range and antigenic structure of the virus. J Virol 68:7689–7696[PubMed]
    [Google Scholar]
  44. Shiver J. W., Fu T.-M., Chen L., Casimiro D. R., Davies M.-E., Evans R. K., Zhang Z.-Q., Simon A. J., Trigona W. L., other authors. 2002; Replication-incompetent adenoviral vaccine vector elicits effective anti-immunodeficiency-virus immunity. Nature 415:331–335 [View Article][PubMed]
    [Google Scholar]
  45. Stiegler G., Kunert R., Purtscher M., Wolbank S., Voglauer R., Steindl F., Katinger H. 2001; A potent cross-clade neutralizing human monoclonal antibody against a novel epitope on gp41 of human immunodeficiency virus type 1. AIDS Res Hum Retroviruses 17:1757–1765 [View Article][PubMed]
    [Google Scholar]
  46. Veazey R. S., DeMaria M., Chalifoux L. V., Shvetz D. E., Pauley D. R., Knight H. L., Rosenzweig M., Johnson R. P., Desrosiers R. C., Lackner A. A. 1998; Gastrointestinal tract as a major site of CD4+ T cell depletion and viral replication in SIV infection. Science 280:427–431 [View Article][PubMed]
    [Google Scholar]
  47. Wang X., Rasmussen T., Pahar B., Poonia B., Alvarez X., Lackner A. A., Veazey R. S. 2007; Massive infection and loss of CD4+ T cells occurs in the intestinal tract of neonatal rhesus macaques in acute SIV infection. Blood 109:1174–1181 [View Article][PubMed]
    [Google Scholar]
  48. Wei X., Decker J. M., Liu H., Zhang Z., Arani R. B., Kilby J. M., Saag M. S., Wu X., Shaw G. M., Kappes J. C. 2002; Emergence of resistant human immunodeficiency virus type 1 in patients receiving fusion inhibitor (T-20) monotherapy. Antimicrob Agents Chemother 46:1896–1905 [View Article][PubMed]
    [Google Scholar]
  49. Wei X., Decker J. M., Wang S., Hui H., Kappes J. C., Wu X., Salazar-Gonzalez J. F., Salazar M. G., Kilby J. M., other authors. 2003; Antibody neutralization and escape by HIV-1. Nature 422:307–312 [View Article][PubMed]
    [Google Scholar]
  50. Yuste E., Sanford H. B., Carmody J., Bixby J., Little S., Zwick M. B., Greenough T., Burton D. R., Richman D. D., other authors. 2006; Simian immunodeficiency virus engrafted with human immunodeficiency virus type 1 (HIV-1)-specific epitopes: replication, neutralization, and survey of HIV-1-positive plasma. J Virol 80:3030–3041 [View Article][PubMed]
    [Google Scholar]
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