Molecular structures of viruses from Raman optical activity

References

1. Barron L. D., Hecht L. 2000; Vibrational Raman optical activity: from fundamentals to biochemical applications. In Circular Dichroism, Principles and Applications pp 667–701 Edited by Berova N., Nakanishi K., Woody R. W. New York: John Wiley & Sons;
   [Google Scholar]
2. Barron L. D., Hecht L., Blanch E. W., Bell A. F. 2000; Solution structure and dynamics of biomolecules from Raman optical activity. Progress in Biophysics and Molecular Biology 73:1–49
   [Google Scholar]
3. Bell A. F., Hecht L., Barron L. D. 1997; Vibrational Raman optical activity as a probe of polyribonucleotide solution stereochemistry. Journal of the American Chemical Society 119:6006–6013
   [Google Scholar]
4. Bell A. F., Hecht L., Barron L. D. 1998; Vibrational Raman optical activity of DNA and RNA. Journal of the American Chemical Society 120:5820–5821
   [Google Scholar]
5. Blanch E. W., Bell A. F., Hecht L., Day L. A., Barron L. D. 1999; Raman optical activity of filamentous bacteriophages: hydration of α-helices. Journal of Molecular Biology 290:1–7
   [Google Scholar]
6. Blanch E. W., Hecht L., Day L. A., Pederson D. M., Barron L. D. 2001a; Tryptophan absolute stereochemistry in viral coat proteins from Raman optical activity. Journal of the American Chemical Society 123:4863–4864
   [Google Scholar]
7. Blanch E. W., Robinson D. J., Hecht L., Barron L. D. 2001b; A comparison of the solution structures of tobacco rattle and tobacco mosaic virus from Raman optical activity. Journal of General Virology 82:1499–1502
   [Google Scholar]
8. Blanch E. W., Robinson D. J., Hecht L., Barron L. D. 2002; Solution structures of potato virus X and narcissus mosaic virus from Raman optical activity. Journal of General Virology 83:241–246
   [Google Scholar]
9. Branden C., Tooze J. 1999 Introduction to Protein Structure, 2nd edn. New York: Garland Publishing;
   [Google Scholar]
10. Chen Z., Stauffacher C., Li Y., Schmidt T., Bomu W., Kamer G., Shanks M., Lomonossoff G., Johnson J. E. 1989; Protein–RNA interactions in an icosahedral virus at 3·0 Å resolution. Science 245:154–159
    [Google Scholar]
11. Chiu W., Burnett R. M., Garcia R. L. 1997 (editors) Structural Biology of Viruses New York: Oxford University Press;
    [Google Scholar]
12. Harrison S. C. 2001; Principles of virus structure. In Fields Virology pp 53–85 Edited by Knipe D. M., Howley P. M. Philadelphia: Lippincott Williams & Wilkins;
    [Google Scholar]
13. Hecht L., Barron L. D., Blanch E. W., Bell A. F., Day L. A. 1999; Raman optical activity instrument for studies of biopolymer structure and dynamics. Journal of Raman Spectroscopy 30:815–825
    [Google Scholar]
14. Koszelak S., Dodds J. A., McPherson A. 1989; Preliminary analysis of crystals of satellite tobacco mosaic virus. Journal of Molecular Biology 209:323–325
    [Google Scholar]
15. Kraulis P. J. 1991; molscript: a program to produce both detailed and schematic plots of protein structures. Journal of Applied Crystallography 24:946–950
    [Google Scholar]
16. Larson S. B., Day J., Greenwood A., McPherson A. 1998; Refined structure of satellite tobacco mosaic virus at 1·8 Å resolution. Journal of Molecular Biology 277:37–59
    [Google Scholar]
17. Larson S. B., McPherson A. 2001; Satellite tobacco mosaic virus RNA: structure and implications for assembly. Current Opinion in Structural Biology 11:59–65
    [Google Scholar]
18. Lin T., Chen Z., Usha R., Stauffacher C. V., Dai J.-B., Schmidt T., Johnson J. E. 1999; The refined crystal structure of cowpea mosaic virus at 2·8 Å resolution. Virology 265:20–34
    [Google Scholar]
19. Lin T., Clark A. J., Chen Z., Shanks M., Dai J.-B., Li Y., Schmidt T., Oxelfelt P., Lomonossoff G. P., Johnson J. E. 2000; Structural fingerprinting: subgrouping of comoviruses by structural studies of red clover mottle virus to 2·4-Å and comparison with other comoviruses. Journal of Virology 74:493–504
    [Google Scholar]
20. Lomonossoff G. P., Johnson J. E. 1991; The synthesis and structure of comovirus capsids. Progress in Biophysics and Molecular Biology 55:107–137
    [Google Scholar]
21. Marvin D. A. 1998; Filamentous phage structure, infection and assembly. Current Opinion in Structural Biology 8:150–158
    [Google Scholar]
22. Miura T., Thomas G. J. Jr 1995; Raman spectroscopy of proteins and their assemblies. In Subcellular Biochemistry, 24 Proteins: Structure, Function and Engineering pp 55–99 Edited by Biswas B. B., Roy S. New York: Plenum Press;
    [Google Scholar]
23. Nafie L. A. 1997; Infrared and Raman vibrational optical activity. Annual Review of Physical Chemistry 48:357
    [Google Scholar]
24. Namba K., Pattanayek R., Stubbs G. 1989; Visualization of protein-nucleic acid interactions in a virus. Journal of Molecular Biology 208:307–325
    [Google Scholar]
25. Pedrocchi M., Schäfer B. W., Durussel I., Cox J. A., Heizmann C. W. 1994; Purification and characterization of the recombinant human calcium-binding S100 proteins CAPL and CACY. Biochemistry 33:6732–6738
    [Google Scholar]
26. Smith G. P., Scott J. K. 1993; Libraries of peptides and proteins displayed on filamentous phage. Methods in Enzymology 217H:228–257
    [Google Scholar]
27. Stonehouse N. J., Stockley P. G. 1993; Effects of amino acid substitutions on the thermal stability of MS2 capsids lacking genomic RNA. FEBS Letters 334:355–359
    [Google Scholar]
28. Thomas G. J. Jr 1987; Viruses and nucleoproteins. In Biological Applications of Raman Spectroscopy. pp 135–201 Edited by Spiro T. G. New York: John Wiley & Sons;
29. Thomas G. J. Jr 1999; Raman spectroscopy of protein and nucleic acid assemblies. Annual Review of Biophysics and Biomolecular Structure 28:1–27
    [Google Scholar]
30. Tsuboi M., Overman S. A., Thomas G. J. Jr 1996; Orientation of tryptophan-26 in coat protein subunits of the filamentous virus Ff by polarized Raman microspectroscopy. Biochemistry 35:10403–10410
    [Google Scholar]
31. Valegård K., Liljas L., Fridborg K., Unge T. 1990; The three-dimensional structure of the bacterial virus MS2. Nature 345:36–41
    [Google Scholar]