1887

Abstract

The genome of satellite tobacco mosaic virus (STMV) adapted to tobacco mosaic virus (TMV), tomato mosaic virus or green tomato atypical mosaic virus consistently had two single base deletions at positions 1 and 61, corresponding to bases A and G, respectively, as compared to the type-strain genome which is naturally adapted to tobacco mild green mosaic virus (TMGMV). Transcript RNAs (STMV) from clone pSTMV which captured the deletions at positions 1 and 61 were infectious when co-inoculated to tobacco plants with either TMV or TMGMV at infection frequencies of > 90%. Two new STMV variants were created to investigate whether both deletions were essential for adaptation to TMV. These were STMV ΔA, which had the A at position 1 (A) deleted, and STMV ΔG, which lacked G. STMV ΔA was infectious (75% frequency) in the presence of either TMV or TMGMV. Virion RNA of STMV ΔA lost G after one infection cycle with TMV. This deletion did not occur in co-infections with TMGMV. STMV ΔG, like the clone STMV, was infectious (100% frequency) with TMGMV but TMV did not support this clone. When protoplasts were transfected with STMV, STMV ΔA or STMV, STMV replicated when TMGMV was the helper virus. STMVand STMV ΔA replicated in the presence of helper TMV, but STMV did not, the same result as in whole plants. The deletion of A is thus essential for initial STMV adaptation to TMV and the eventual deletion of G is a predicted additional change.

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1998-04-01
2024-12-10
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References

  1. Abrahams J. P., van den Berg M., van Batenburg E., Pleij C. 1990; Prediction of RNA secondary structure, including pseudo- knotting, by computer simulation. Nucleic Acids Research 18:3035–3044
    [Google Scholar]
  2. Dawson W. O., Beck D. L., Knorr D. A., Grantham G. L. 1986; cDNA cloning of the complete genome of tobacco mosaic virus and production of infectious transcripts. Proceedings of the National Academy of Sciences, USA 83:1832–1836
    [Google Scholar]
  3. Devereux J., Haeberli P., Smithies O. 1984; A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Research 12:387–395
    [Google Scholar]
  4. Dodds J. A. 1991; Structure and function of the genome of satellite tobacco mosaic virus. Canadian Journal of Plant Pathology 13:192–195
    [Google Scholar]
  5. Ishikawa M., Meshi T., Watanabe Y., Okada Y. 1988; Replication of chimeric tobacco mosaic viruses which carry heterologous combinations of replicase genes and 3′ noncoding regions. Virology 164:290–293
    [Google Scholar]
  6. Ishikawa M., Kroner P., Ahlquist P., Meshi T. 1991; Biological activities of hybrid RNAs generated by 3′-end exchanges between tobacco mosaic virus and brome mosaic virus. Journal of Virology 65:3451–3459
    [Google Scholar]
  7. Kurath G., Dodds J. A. 1995; Mutation analyses of molecularly cloned satellite tobacco mosaic virus during serial passage in plants: evidence for hot spots of genetic changes. RNA 1:491–500
    [Google Scholar]
  8. Kurath G., Rey M. E. C., Dodds J. A. 1992; Analysis of genetic heterogeneity within the type strain of satellite tobacco mosaic virus reveals several variants and a strong bias for A to G substitution mutations. Virology 189:233–244
    [Google Scholar]
  9. Kurath G., Heick J. A., Dodds J. A. 1993a; RNase protection analyses show high genetic diversity among field isolates of satellite tobacco mosaic virus. Virology 194:414–418
    [Google Scholar]
  10. Kurath G., Rey M. E. C., Dodds J. A. 1993b; Tobamovirus helper specificity of satellite tobacco mosaic virus involves a domain near the 5′ end of the satellite genome. Journal of General Virology 74:1233–1243
    [Google Scholar]
  11. Mirkov T. E., Mathews D. M., Du Plessis D. H., Dodds J. A. 1989; Nucleotide sequence and translation of satellite tobacco mosaic virus RNA. Virology 170:139–146
    [Google Scholar]
  12. Mirkov T. E., Kurath G., Mathews D. M., Elliot K., Dodds J. A., Fitzmaurice L. 1990; Factors affecting efficient infection of tobacco with in vitro transcripts from cloned cDNA of satellite tobacco mosaic virus. Virology 179:395–402
    [Google Scholar]
  13. Pogue G. P., Hall T. C. 1992; The requirements of a 5′ stem-loop structure in brome mosaic virus replication supports a new model for viral positive strand RNA initiation. Journal of Virology 66:674–684
    [Google Scholar]
  14. Rao A. L. N., Duggal R., Lasher F., Hall T. C. 1994; Analysis of RNA replication in plant viruses. Molecular virology techniques. Methods in Molecular Genetics 4:216–236
    [Google Scholar]
  15. Roossinck M. J., Sleat D., Palukaitis P. 1992; Satellite RNAs of plant viruses - structural and biological effect. Microbiological Reviews 56:265–279
    [Google Scholar]
  16. Routh G., Ngon A Yassi M., Rao A. L. N., Mirkov T. E., Dodds J. A. 1997; Replication of wild-type and mutant clones of satellite tobacco mosaic virus in Nicotiana benthamiana protoplasts. Journal of General Virology 78:1271–1275
    [Google Scholar]
  17. Sanger F., Nicklen S., Coulson A. R. 1977; DNA sequencing with chain-terminating inhibitors. Proceedings of the National Academy of Sciences, USA 74:5463–5467
    [Google Scholar]
  18. Turpen T. H., Reinl S. J., Charoenvit Y., Hoffman S. l., Fallarme V., Grill L. K. 1994; Malarial epitopes expressed on the surface of recombinant tobacco mosaic virus. Bio/Technology 13:53–57
    [Google Scholar]
  19. Valverde R. A., Dodds J. A. 1987; Some properties of isometric virus particles which contain the satellite RNA of tobacco mosaic virus. Journal of General Virology 68:965–972
    [Google Scholar]
  20. Valverde R. A., Heick J. A., Dodds J. A. 1991; Interactions between satellite tobacco mosaic virus, helper tobamoviruses, and their hosts. Phytopathology 81:99–104
    [Google Scholar]
  21. Weng Z., Xiong Z. 1995; A method for accurate determination of terminal sequences of viral genomic RNA. Genome Research 5:202–207
    [Google Scholar]
  22. Zuker M., Stiegler P. 1981; Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information. Nucleic Acids Research 9:133–148
    [Google Scholar]
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