1887

Abstract

The complete genomic sequence of cardamine chlorotic fleck carmovirus (CCFV) has been determined. The genome is a positive-sense ssRNA molecule 4041 nucleotides in length, and has 47 to 64% sequence identity with turnip crinkle, carnation mottle and melon necrotic spot carmoviruses. CCFV and these other carmoviruses have four similar open reading frames (ORFs), and CCFV has large regions of amino acid identity in all of these ORFs with a European isolate of turnip crinkle virus. CCFV, which replicates well in , has only been found so far in Australia in the wild perennial brassica .

Loading

Article metrics loading...

/content/journal/jgv/10.1099/0022-1317-74-9-1933
1993-09-01
2024-04-18
Loading full text...

Full text loading...

/deliver/fulltext/jgv/74/9/JV0740091933.html?itemId=/content/journal/jgv/10.1099/0022-1317-74-9-1933&mimeType=html&fmt=ahah

References

  1. Argos P. 1988; A sequence motif in many polymerases.. Nucleic Acids Research 16:9909–9916
    [Google Scholar]
  2. Carrington JC, Heaton LA, Zuidema D, Hillman BI, Morris TJ. 1989; The genome structure of turnip crinkle virus.. Virology 170:219–226
    [Google Scholar]
  3. Dangl J. 1993; Applications of Arabidopsis thaliana to outstanding issues in plant-pathogen interactions.. International Review of Cytology (in press)
    [Google Scholar]
  4. Francki RIB, Fauquet CM, Knudson DL, Brown F. 1991; Classification and Nomenclature of Viruses: Fifth Report of the International Committee on Taxonomy of Viruses.. Archives of Virology Supplementum 2:
    [Google Scholar]
  5. Gibbs A, Harrison B. 1976 In Plant Virology: The Principles pp 17073–74 London: Edward Arnold;
    [Google Scholar]
  6. Gubler U, Hoffman BJ. 1983; A simple and very efficient method for generating cDNA libraries.. Gene 25:263–269
    [Google Scholar]
  7. Guilley H, Carrington JC, Balazs E, Jonard G, Richards K, Morris TJ. 1985; Nucleotide sequence and genome organisation of carnation mottle virus RNA.. Nucleic Acids Research 13:6663–6677
    [Google Scholar]
  8. Guy PL, Gibbs AJ. 1981; A tymovirus of Cardamine sp. from alpine Australia.. Australasian Plant Pathology 10:12–13
    [Google Scholar]
  9. Guy PL, Gibbs AJ. 1985; Further studies on turnip yellow mosaic tymovirus isolates from an endemic Australian Cardamine.. Plant Pathology 34:532–544
    [Google Scholar]
  10. Hacker DL, Petty ITD, Wei N, Morris TJ. 1992; Turnip crinkle virus genes required for RNA replication and virus movement.. Virology 186:1–8
    [Google Scholar]
  11. Hearne PQ, Knorr DA, Hillman BI, Morris TJ. 1990; The complete genome structure and synthesis of infectious RNA from clones of tomato bushy stunt virus.. Virology 177:141–151
    [Google Scholar]
  12. Ishikawa M, Obata F, Kumagai T, Ohno T. 1991; Isolation of mutants of Arabidopsis thaliana in which accumulation of tobacco mosaic virus coat protein is reduced to low levels.. Molecular and General Genetics 230:33–38
    [Google Scholar]
  13. Kamer G, Argos P. 1984; Primary structural comparison of RNA-dependent polymerases from plant, animal and bacterial viruses.. Nucleic Acids Research 12:7269–7282
    [Google Scholar]
  14. Li XH, Simon AE. 1990; Symptom intensification on cruciferous hosts by the virulent satellite RNA of turnip crinkle virus.. Phytophathology 80:238–242
    [Google Scholar]
  15. Maniatis T, Fritsch EF, Sambrook J. 1982 Molecular Cloning: A Laboratory Manual New York: Cold Spring Harbor Laboratory;
    [Google Scholar]
  16. Riviere CJ, Rochon DM. 1990; Nucleotide sequence and genomic organization of melon necrotic spot virus.. Journal of General Virology 71:1887–1896
    [Google Scholar]
  17. Sambrook J, Fritsch EF, Maniatis T. 1989 Molecular Cloning: A Laboratory Manual, 2nd edn.. New York: Cold Spring Harbor Laboratory;
    [Google Scholar]
  18. Simon AE, Polacco M, Li XH, Carpenter CD. 1991; Resistance and susceptibility of Arabidopsis thaliana to turnip crinkle virus.. Proceedings of the 3rd International Congress of Plant Molecular Biology p. 101
    [Google Scholar]
  19. Skotnicki ML, Mackenzie AM, Gibbs AJ. 1991; Mutation of Arabidopsis thaliana for tolerance to tymovirus infection.. Proceedings of the 3rd International Congress of Plant Molecular Biology p. 1219
    [Google Scholar]
  20. Skotnicki ML, Mackenzie AM, Torronen M, Brunt AA, Gibbs AJ. 1992a; Cardamine chlorotic fleck virus, a new carmovirus from the Australian alps.. Australasian Plant Pathology 21:120–122
    [Google Scholar]
  21. Skotnicki ML, Mackenzie AM, Gibbs AJ. 1992b; Turnip yellow mosaic virus variants produced from DNA clones encoding their genomes.. Archives of Virology 127:25–35
    [Google Scholar]
  22. Skotnicki ML, Mackenzie A, Ding SW, Mo JQ, Gibbs AJ. 1993; RNA hybrid mismatch polymorphisms in Australian populations of turnip yellow mosaic virus.. Archives of Virology (in press)
    [Google Scholar]
  23. Staden R. 1982; Automation of the computer handling of gel reading data produced by the shotgun method of DNA sequencing.. Nucleic Acids Research 10:4731–4751
    [Google Scholar]
  24. Williams JG. K, Kubelik AR, Livak KJ, Rafalski JA, Tingey SV. 1990; DNA polymorphisms amplified by arbitrary primers are useful as genetic markers.. Nucleic Acids Research 18:6531–6535
    [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/jgv/10.1099/0022-1317-74-9-1933
Loading
/content/journal/jgv/10.1099/0022-1317-74-9-1933
Loading

Data & Media loading...

This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error