Genome typing of southern African subgroup 1 geminiviruses

References

1. Andersen M. T., Richardson K. A., Harbison S.-A., Morris B. A. M. 1988; Nucleotide sequence of the geminivirus chloris striate mosiac virus. Virology 164:443–449
   [Google Scholar]
2. Aoki K., Tateno Y., Takahata N. 1981; Estimating evolutionary distances from restriction maps of mitochondrial DNA with arbitrary G + C content. Journal of Molecular Evolution 18:1–8
   [Google Scholar]
3. Bock K. R., Guthrie E. J., Woods R. D. 1974; Purification of maize streak virus and its relationship to viruses associated with streak diseases of sugarcane and Panicum maximum. Annals of Applied Biology 77:289–296
   [Google Scholar]
4. Boulton M. I., Steinkellner H., Donson J., Markham P. G., King D. I., Davies J. W. 1989; Mutational analysis of the virion-sense genes of maize streak virus. Journal of General Virology 70:2309–2323
   [Google Scholar]
5. Briddon R. W., Lunness P., Chamberlin L. C. L., Pinner M. S., Brundish H., Markham P. G. 1992; The nucleotide sequence of an infectious, insect-transmissible clone of the geminivirus Panicum streak virus. Journal of General Virology 73:1041–1047
   [Google Scholar]
6. Chatani M., Matsumoto Y., Mizuta H., Ikegami M., Boulton M. I., Davies J. W. 1991; The nucleotide sequence and genome structure of the geminivirus miscanthus streak virus. Journal of General Virology 72:2325–2331
   [Google Scholar]
7. Clarke B. A. 1987 Molecular biological studies of southern African isolates of maize streak virus M.Sc. thesis University of Cape Town;
   [Google Scholar]
8. Clarke B. A., Rybicki E. P., Hughes F. L., Kirby R., von Wechmar M. B. 1989; Characterization of southern African isolates of maize streak virus: typing of three isolates by restriction mapping. Intervirology 30:86–95
   [Google Scholar]
9. Dekker E. L., Pinner M. S., Markham P. G., Van Regenmortel M. H. V. 1988; Characterisation of maize streak virus isolates from different plant species by polyclonal and monoclonal antibodies. Journal of General Virology 69:983–990
   [Google Scholar]
10. Donson J., Accotto G. P., Boulton M. I., Mullineaux P. M., Davies J. W. 1987; The nucleotide sequence of a geminivirus from Digitaria sanguinalis. Virology 161:160–169
    [Google Scholar]
11. Gibbs A., Fenner F. 1984; Methods for comparing sequence data such as restriction endonuclease maps or nucleotide sequences of viral nucleic acid molecules. Journal of Virological Methods 9:317–324
    [Google Scholar]
12. Howarth A. J., Vandemark G. J. 1989; Phylogeny of geminiviruses. Journal of General Virology 70:2717–2727
    [Google Scholar]
13. Howell S. H. 1984; Physical structure and genetic organisation of the genome of maize streak virus (Kenyan isolate). Nucleic Acids Research 12:7359–7375
    [Google Scholar]
14. Howell S. H. 1985; Physical structure and genetic organisation of the genome of maize streak virus (Kenyan isolate). Corrigendum. Nucleic Acids Research 13:3018–3019
    [Google Scholar]
15. Hughes F. L. 1991 Molecular investigations of subgroup 1 geminivir-uses Ph.D. thesis University of Cape Town;
    [Google Scholar]
16. Hughes F. L., Rybicki E. P., Kirby R., von Wechmar M. B. 1991; Characterization of the sugarcane streak agent as a distinct geminivirus. Intervirology 32:19–27
    [Google Scholar]
17. Hull R., Stanley J., Briddon R. W. 1991; Geminivirus. In Classification and Nomenclature of Viruses Fifth Report of the International Committee on Taxonomy of Viruses pp 173–177 Edited by Francki R. I. B., Fauquet C. M., Knudson D. L., Brown F. Archives of Virology, Supplement 2 Wien: Springer-Verlag;
    [Google Scholar]
18. Ikegami M., Yazaki K., Chatani M., Mizuta H. 1990; Molecular cloning and physical mapping of the DNA of miscanthus streak geminivirus. Intervirology 30:340–345
    [Google Scholar]
19. Julia J. F., Dollett M. 1989; Nesoclutha declivata Homoptera Cicadellidae vector of digitaria streak virus (geminivirus) in Vanuatu. Journal of Phytopathology 127:42–48
    [Google Scholar]
20. Kaplan N. 1983; Statistical analysis of restriction enzyme map data and nucleotide sequence data. In Statistical Analysis of DNA Sequence Data Statistics: Textbooks and Monographs vol 47 pp 75–106 Edited by Owen D. B., Cornell R. G. New York & Basel: Marcel Dekker;
    [Google Scholar]
21. Kirby R., Clarke B. A., Rybicki E. P. 1989; Evolutionary relationship of three southern African maize streak virus isolates. Intervirology 30:96–101
    [Google Scholar]
22. Lazarowitz S. G. 1988; Infectivity and complete nucleotide sequence of the genome of a South African isolate of maize streak virus. Nucleic Acids Research 16:229–249
    [Google Scholar]
23. Li W.-H., Graur D. 1991 Fundamentals of Molecular Evolution pp 284 Sunderland: Sinauer Associates;
    [Google Scholar]
24. McClean A. P. D. 1947; Some forms of streak virus occurring in maize, sugarcane and wild grasses. South African Department of Agriculture Science Bulletin 265:1–33
    [Google Scholar]
25. MacDowell S. W., MacDonald H., Hamilton W. D. O., Coutts R. H. A., Buck K. W. 1985; The nucleotide sequence of cloned wheat dwarf mosaic virus DNA. EMBO Journal 4:2173–2180
    [Google Scholar]
26. Mullineaux P. M., Donson J., Morris-Krsinich B. A. M., Boulton M. I., Davies J. W. 1984; The nucleotide sequence of maize streak virus DNA. EMBO Journal 3:3063–3068
    [Google Scholar]
27. Nei M., Li W. -H. 1979; Mathematical model for studying genetic variation in terms of restriction endonucleases. Proceedings of the National Academy of Sciences, U.S.A. 76:5269–5273
    [Google Scholar]
28. Peterschmitt M., Reynaud B., Sommermeyer G., Baudin P. 1990; Characterization of maize streak virus isolates using monoclonal and polyclonal antibodies and by transmission to a few hosts. Plant Disease 75:27–32
    [Google Scholar]
29. Pinner M. S., Markham P. G. 1990a; Relatedness of monocotyledon-infecting geminiviruses compared using ELISA. In VIIIth International Congress of Virology, Berlin, Abstracts p 449
    [Google Scholar]
30. Pinner M. S., Markham P. G. 1990b; Serotyping and strain identification of maize streak virus isolates. Journal of General Virology 71:1635–1640
    [Google Scholar]
31. Pinner M. S., Markham P. G., Markham R. H., Dekker E. L. 1988; Characterisation of maize streak virus: description of strains, symptoms. Plant Pathology 37:74–87
    [Google Scholar]
32. Rybicki E. P. 1991; The use of serological differentiation indices for phylogenetic analysis of plant viruses. Archives of Virology 118:83–93
    [Google Scholar]
33. Rybicki E. P., Hughes F. L. 1990; Detection and typing of maize streak virus and other distantly related geminiviruses of grasses by polymerase chain reaction amplification of a conserved viral sequence. Journal of General Virology 71:2519–2526
    [Google Scholar]
34. Rybicki E. P., Hughes F. L., Clarke B. A., von Wechmar M. B. 1989; Detection and differentiation of isolates of maize streak virus by use of cloned DNA hybridization probes. In Proceedings of the 8th South African Maize Breeding Symposium, 1988, Technical Communications No. 222 pp 27–32 Edited by du Plessis J. G. Pretoria: The Government Printer;
    [Google Scholar]
35. Saitou N., Nei M. 1987; The neighbour-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution 4:406–425
    [Google Scholar]
36. Sambrook J., Fritsch E. F., Maniatis T. 1989 Molecular Cloning: A Laboratory Manual 2nd edn New York: Cold Spring Harbor Laboratory;
    [Google Scholar]
37. Storey H. H., McClean A. P. D. 1930; The transmission of streak disease between maize, sugarcane and wild grasses. Annals of Applied Biology 17:691–719
    [Google Scholar]