1887

Abstract

Barley yellow dwarf virus (BYDV) can be separated into two groups based on, among other criteria, serological relationships that are presumably governed by the viral capsid structure. Nucleotide sequences for the coding regions of coat proteins of approximately 22 K were identified for the MAV-PS1, P-PAV (group 1) and NY-RPV (group 2) isolates of BYDV. The MAV-PS1 and P-PAV coat protein sequences shared 71 % deduced amino acid similarity whereas that of the NY-RPV isolate shared no more than 51 % similarity with either the MAV-PS1 or the P-PAV sequence. Other comparisons showed that these and other BYDV coat protein sequences examined to date share a high degree of identity with those identified from other luteoviruses. Among luteovirus coat protein sequences in general, several highly conserved domains were identified whereas other domains differentiate MAV- PS1 and PAV isolates from NY-RPV and other luteoviruses. Sequence similarities and differences among BYDV coat proteins (approx. 22K) are consistent with the serological relationships exhibited by these viruses. Amino acid sequence comparisons between BYDV isolates that share common aphid vectors indicate that it is unlikely that these coat proteins are involved in aphid specificity.

Loading

Article metrics loading...

/content/journal/jgv/10.1099/0022-1317-71-12-2791
1990-12-01
2024-04-23
Loading full text...

Full text loading...

/deliver/fulltext/jgv/71/12/JV0710122791.html?itemId=/content/journal/jgv/10.1099/0022-1317-71-12-2791&mimeType=html&fmt=ahah

References

  1. Aapola A. I., Rochow W. F. 1971; Relationships among three isolates of barley yellow dwarf virus. Virology 46:127–141
    [Google Scholar]
  2. Barbara D. J., Kawata E. E., Ueng P. P., Lister R. M., Larkins B. A. 1987; Production of cDNA clones from the MAV isolate of barley yellow dwarf virus. Journal of General Virology 68:2419–2427
    [Google Scholar]
  3. Birnboim H. C., Doly J. 1979; A rapid alkaline extraction procedure for screening recombinant plasmid DNA. Nucleic Acids Research 7:1513–1523
    [Google Scholar]
  4. Devereux J., Haeberli P., Smithies O. 1984; A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Research 12:387–395
    [Google Scholar]
  5. Diaco R., Lister R. M., Hill J. H., Durand D. P. 1986a; Detection of homologous and heterologous barley yellow dwarf virus isolates with monoclonal antibodies in serologically specific electron microscopy. Phytopathology 76:225–230
    [Google Scholar]
  6. Diaco R., Lister R. M., Hill J. H., Durand D. P. 1986b; Demonstration of serological relationships among isolates of barley yellow dwarf virus using polyclonal and monoclonal antibodies. Journal of General Virology 67:353–362
    [Google Scholar]
  7. Feinberg A. P., Vogelstein B. 1983; A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Analytical Biochemistry 132:6–13
    [Google Scholar]
  8. Gildow F. E. 1987; Virus-membrane interactions involved in circulative transmission of luteoviruses by aphids. Current Topics in Vector Research 4:166–209
    [Google Scholar]
  9. Gildow F. E., Rochow W. F. 1980; Role of accessory salivary glands in aphid transmission of barley yellow dwarf virus. Virology 104:97–108
    [Google Scholar]
  10. Gildow F. E., Ballinger M. E., Rochow W. F. 1983; Identification of double-stranded RNAs associated with barley yellow dwarf virus infection of oats. Phytopathology 73:1570–1572
    [Google Scholar]
  11. Gill C. C., Chung J. 1979; Cytopathological evidence for the division of barley yellow dwarf virus isolates into two subgroups. Virology 95:59–69
    [Google Scholar]
  12. Guo L. -H., Yang R. C. A., Wu R. 1983; An improved strategy for rapid direct sequencing of both strands of long DNA molecules cloned into a plasmid. Nucleic Acids Research 11:5521–5540
    [Google Scholar]
  13. Hammond J., Lister R. M., Foster J. E. 1983; Purification, identity and some properties of an isolate of barley yellow dwarf virus from Indiana. Journal of General Virology 64:667–676
    [Google Scholar]
  14. Harrison S. C. 1983; Virus structure: high resolution perspectives. Advances in Virus Research 28:175–240
    [Google Scholar]
  15. Hewings A. D., D’Arcy C. 1986; Comparative characterization of two luteoviruses: beet western yellows virus and barley yellow dwarf virus. Phytopathology 76:1270–1274
    [Google Scholar]
  16. Kawchuk L. M., Martin R. R., Rochon D. M., Mcpherson J. 1989; Identification and characterization of the potato leafroll virus putative coat protein gene. Journal of General Virology 70:783–788
    [Google Scholar]
  17. Keese P., Martin R. R., Kawchuk L. M., Waterhouse P. M., Gerlach W. L. 1990; Nucleotide sequences of an Australian and a Canadian isolate of potato leafroll luteovirus and their relationships with two European isolates. Journal of General Virology 71:719–724
    [Google Scholar]
  18. Krieg P. A., Melton D. A. 1987; In vitro RNA synthesis with SP6 polymerase. Methods in Enzymology 155:397–415
    [Google Scholar]
  19. Laemmli U. K. 1970; Cleavage of structural proteins during assembly of the head of bacteriophage T4. Nature; London: 227680–685
    [Google Scholar]
  20. Lister R. M., Sward R. L. 1988; Anomalies in serological and vector relationships of MAV-like isolates of barley yellow dwarf virus from Australia and the U.S.A. Phytopathology 78:766–770
    [Google Scholar]
  21. Maniatis T., Fritsch E. F., Sambrook J. 1982 Molecular Cloning: A Laboratory Manual New York: Cold Spring Harbor Laboratory;
    [Google Scholar]
  22. Matthews R. E. F. 1982; Classification and nomenclature of viruses. Intervirology 17:1–199
    [Google Scholar]
  23. Mayo M. A., Robinson D. J., Jolly C. A., Hyman L. 1989; Nucleotide sequence of potato leafroll luteovirus RNA. Journal of General Virology 70:1037–1051
    [Google Scholar]
  24. Miller W. A., Waterhouse P. M., Gerlach W. L. 1988a; Sequence and organization of barley yellow dwarf virus genomic RNA. Nucleic Acids Research 16:6096–6111
    [Google Scholar]
  25. Miller W. A., Waterhouse P. M., Kortt A. A., Gerlach W. L. 1988b; Sequence and identification of the barley yellow dwarf virus coat protein gene. Virology 165:306–309
    [Google Scholar]
  26. Murphy J. F., D’Arcy C. J., Clark J. M.Jr 1989; Barley yellow dwarf virus RNA has a 5′-terminal genome-linked protein. Journal of General Virology 70:2253–2256
    [Google Scholar]
  27. Pelham H. R. B., Jackson R. J. 1976; An efficient mRNA- dependent translation system from reticulocyte lysates. European Journal of Biochemistry 67:247–256
    [Google Scholar]
  28. Prill B., Maiss E., Timpe U., Casper R. 1989; Nucleotide sequence of the potato leafroll virus coat protein gene. Nucleic Acids Research 17:1768
    [Google Scholar]
  29. Putney S. D., Benkovic S. J., Schimmel P. 1981; A DNA fragment with an α-phosphothiolate nucleotide at one end is asymmetrically blocked from digestion by exonuclease III and can be replicated in vivo. Proceedings of the National Academy of Sciences U.S.A: 787350–7354
    [Google Scholar]
  30. Rochow W. F. 1970a; Barley yellow dwarf virus. CMI/AAB Descriptions of Plant Viruses32
    [Google Scholar]
  31. Rochow W. F. 1970b; Barley yellow dwarf virus: phenotypic mixing and vector specificity. Science 167:875–878
    [Google Scholar]
  32. Rochow W. F., Carmichael L. E. 1979; Specificity among barley yellow dwarf viruses in enzyme immunosorbent assays. Virology 95:415–420
    [Google Scholar]
  33. Rochow W. F., Duffus J. E. 1978; Relationships between barley yellow dwarf and beet western yellows viruses. Phytopathology 68:51–58
    [Google Scholar]
  34. Rochow W. F., Duffus J. E. 1981; Luteoviruses and yellows diseases. In Handbook of Plant Virus Infections and Comparative Diagnosis pp 147–170 Kurstak E. Edited by Amsterdam: Elsevier/North-Holland;
    [Google Scholar]
  35. Rossmann M. G., Johnson J. E. 1989; Icosahedral RNA virus structure. Annual Review of Biochemistry 58:533–573
    [Google Scholar]
  36. Sanger F., Nicklen S., Coulson A. R. 1977; DNA sequencing with chain-terminating inhibitors. Proceedings of the National Academy of Sciences U.S.A: 745463–5467
    [Google Scholar]
  37. Veidt I., Lot H., Leiser M., Scheidecker D., Guilley H., Richards K., Jonard G. 1988; Nucleotide sequence of beet western yellows virus RNA. Nucleic Acids Research 16:9917–9932
    [Google Scholar]
  38. Vieira J., Messing J. 1982; The pUC plasmids, an ml3mp7- derived system for insertion mutagenesis and sequencing with synthetic universal primers. Gene 19:259–268
    [Google Scholar]
  39. Waterhouse P. M., Gildow F. E., Johnstone G. R. 1988; Luteovirus group. AAB Descriptions of Plant Viruses339
    [Google Scholar]
  40. Waterhouse P. M., Martin R. R., Gerlach W. L. 1989; BYDV- PAV virions contain readthrough protein. Phytopathology 79:1215 abstract
    [Google Scholar]
  41. Young R. A., Davis R. W. 1983; Efficient isolation of genes using antibody probes. Proceedings of the National Academy of Sciences U.S.A: 801194–1198
    [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/jgv/10.1099/0022-1317-71-12-2791
Loading
/content/journal/jgv/10.1099/0022-1317-71-12-2791
Loading

Data & Media loading...

This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error