Coat Protein of Melon Necrotic Spot Carmovirus is More Similar to Those of Tombusviruses than Those of Carmoviruses

References

1. Alwine J. C., Kemp D. J., Stark G. R. 1977; Method for detection of specific RNAs in agarose gels by transfer to diazobenzyloxymethyl-paper and hybridization with DNA probes. Proceedings of the National Academy of SciencesU.S.A. 745350–5354
   [Google Scholar]
2. Bailey J. M., Davidson N. 1976; Methylmercury as a reversible denaturing agent for agarose gel electrophoresis. Analytical Biochemistry 70:75–85
   [Google Scholar]
3. Barr P. J., Thayer R. M., Laybourn P., Najarian R. C., Seela F., Tolan D. R. 1986; 7-Deaza-2′- deoxyguanosine-5′-triphosphate: enhanced resolution in M13 dideoxy sequencing. BioTechniques 4:428–432
   [Google Scholar]
4. Bos L., Van dorst H. J. M., Huttinga H., Maat D. Z. 1984; Further characterization of melon necrotic spot virus causing severe disease in glasshouse cucumbers in the Netherlands and its control. Netherlands Journal of Plant Pathology 90:55–69
   [Google Scholar]
5. Carrington J. C., Morris T. J. 1985; Characterization of the cell-free translation products of carnation mottle virus genomic and subgenomic RNAs. Virology 144:1–10
   [Google Scholar]
6. Carrington J. C., Morris T. J., Stockley P. G., Harrison S. C. 1987; Structure and assembly of turnip crinkle virus. IV. Analysis of the coat protein gene and implications of the subunit primary structure. Journal of Molecular Biology 194:265–276
   [Google Scholar]
7. Dayhoff M. O., Eck R. V., Park C. M. 1969; A model of evolutionary change in proteins. In Atlas of Protein Sequence and Structure 475–83 Dayhoff M. O. Silver Spring: National Biomedical Research Foundation;
   [Google Scholar]
8. Dias H. F., Mckeen C. D. 1972; Cucumber necrosis virus. CMI/AAB Descriptions of Plant Viruses82
   [Google Scholar]
9. Gergen J. P., Stern R. H., Wensink P. C. 1979; Filter replicas and permanent collections of recombinant DNA plasmids. Nucleic Acids Research 7:2115–2136
   [Google Scholar]
10. Gubler U., Hoffman B. J. 1983; A simple and very efficient method for generating cDNA libraries. Gene 25:263–269
    [Google Scholar]
11. Guilley H., Carrington J. C., Balazs E., Jonard G., Richards K., Morris T. J. 1985; Nucleotide sequence and genome organization of carnation mottle virus RNA. Nucleic AcidsResearch 13:6663–6677
    [Google Scholar]
12. Harrison B. D. 1987; Plant virus transmission by vectors: mechanisms and consequences. In Symposia of the Society for General Microbiology 40Molecular Basis of Virus Disease319–344 Russell W. C., Almond J. W. New York & Cambridge: Cambridge University Press;
    [Google Scholar]
13. Harrison S. C., Olson A. J., Schutt C. E., Winkler F. K. 1978; Tomato bushy stunt virus at 2.9 Å resolution. Nature London: 276368–373
    [Google Scholar]
14. Hibi T., Furuki I. 1985; Melon necrotic spot virus. CMI/ AAB Descriptions of Plant Viruses302
    [Google Scholar]
15. Hillman B. I., Hearne P., Rochon D., Morris T. J. 1989; Organization of tomato bushy stunt genome: characterization of the coat protein gene and the 3′ terminus. Virology 169:42–50
    [Google Scholar]
16. Hogle J. M., Maeda A., Harrison S. C. 1986; Structure and assembly of turnip crinkle virus. I. X-ray crystallographic structure analysis at 3.2 Å resolution. Journal of Molecular Biology 191:625–638
    [Google Scholar]
17. Hopper P., Harrison S. C., Sauer R. T. 1984; Structure of tomato bushy stunt virus. V. Coat protein sequence determination and its structural implications. Journal of Molecular Biology 177:701–713
    [Google Scholar]
18. Koenig R., Kunze L. 1982; Identification of tombusvirus isolates from cherry in southern Germany as petunia asteroid mosaic virus. Phytopathologische Zeitschrift 103:361–368
    [Google Scholar]
19. Korneluk R. G., Quan F., Gravel R. A. 1985; Rapid and reliable dideoxy sequencingof double-stranded DNA. Gene 40:317–323
    [Google Scholar]
20. Lutcke H. A., Chow K. C., Mickel F. S., Moss K. A., Kern H. F., Scheele G. A. 1987; Selection of AUG initiation codons differs in plants and animals. EMBO Journal 6:43–48
    [Google Scholar]
21. Martelli G. P., Gallitelli D., Russo M. 1988; Tombusviruses. In The Plant Viruses 313–72 Koenig R. New York: Plenum Press;
    [Google Scholar]
22. Martin R. 1987; Overcoming DNA sequencing artifacts: stops and compressions. Focus 98–9 Gaithersburg: Bethesda Research Laboratories;
    [Google Scholar]
23. Morris T. J., Carrington J. C. 1988; Carnation mottle virus and viruses with similar properties. In The Plant Viruses 373–112 Koenig R. New York: Plenum Press;
    [Google Scholar]
24. Morris T. J., Dodds J. A. 1979; Isolation and analysis of double-stranded RNA from virus-infected plant and fungal tissue. Phytopathology 69:854–858
    [Google Scholar]
25. Needleman S. B., Wunsch C. D. 1970; General method applicable to the search for similarities in the amino acid sequence of two proteins. Journal of Molecular Biology 48:443–453
    [Google Scholar]
26. Pustell J., Kafatos F. C. 1984; Convenient and adaptable package of computer programs for DNA and protein sequence management, analysis and homology determination. Nucleic Acids Research 12:643–655
    [Google Scholar]
27. Rigby P. W. J., Dieckmann M., Rhodes C., Berg P. 1977; Labelling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I. Journal of Molecular Biology 113:237–251
    [Google Scholar]
28. Riviere C. J., Rochon D. M. 1988; Sequence and organization of the melon necrotic spot virus genome. Canadian Journal of Plant Pathology (abstract) 10:372
    [Google Scholar]
29. Rochon D., Tremaine J. H. 1988; Cucumber necrosis virus is a member of the tombusvirus group. Journal of General Virology 69:395–400
    [Google Scholar]
30. Rochon D. M., Tremaine J. H. 1989; Complete nucleotide sequence of the cucumber necrosis virus genome. Virology 169:251–259
    [Google Scholar]
31. Sanger F., Nicklen S., Coulson A. R. 1977; DNA sequencing with chain-terminating inhibitors. Proceedings of the National Academy of SciencesU.S.A. 745463–5467
    [Google Scholar]
32. Sippel A. 1973; Purification and characterization of adenosinetriphosphate : ribonucleic acid adenyl transferase from Escherichia coli. European Journal of Biochemistry 37:31–34
    [Google Scholar]
33. Staden R. 1982; An interactive graphics program for comparing and aligning nucleic acid andamino acid sequences. Nucleic Acids Research 10:2951–2961
    [Google Scholar]
34. Tabor S., Richardson C. C. 1987; DNA sequence analysis with a modified bacteriophage T7 DNA polymerase. Proceedings of the National Academy of SciencesU.S.A. 844767–4771
    [Google Scholar]
35. Taylor J. M., Illmensee R., Summers J. 1976; Efficient transcription of RNA into DNA by avian sarcoma virus polymerase. Biochimica et biophysica acta 442:324–330
    [Google Scholar]
36. Toneguzzo F., Glynn S., Levi E., Mjolsness S., Hayday A. 1988; Use of a chemically modified T7 DNA polymerase for manual and automated sequencing of supercoiled DNA. BioTechniques 6:460–469
    [Google Scholar]
37. Tremaine J. H., Ronald W. P., Mcgauley E. M. 1983; Effect of sodium dextran sulfate on some isometric plant viruses. Phytopathology 73:1241–1246
    [Google Scholar]
38. Zimmern D. 1988; Evolution of RNA viruses. In RNA Genetics IIRetroviruses, Viroids and RNA Recombination211–240 Domingo E., Holland J. J., Ahlquist P. Boca Raton: CRC Press;
    [Google Scholar]