Nucleotide Sequences of 5′ and 3′ Non-coding Regions of Pepper Mild Mottle Virus Strain S RNA

References

1. Alonso E., Garcia-Luque I., Avila-Rincon M. J., Wicke B., Serra M. T., Diaz-Ruiz J. R. 1989; A tobamovirUS causing heavy losses in protected pepper crops in Spain. Journal of Phytopathology 125:67–76
   [Google Scholar]
2. Bruening G., Beachy R. N., Scalla R., Zaitlin M. 1976; In vitro and in vivo translation of the ribonucleic acids of a cowpea strain of tobacco mosaic virus. Virology 71:498–517
   [Google Scholar]
3. Bujarski J. J., Ahlquist P., Hall T.C., Dreher T. W., Kaesberg P. 1986; Modulation of replication, aminoacylation and adenylation In vitro and infectivity in vivo of BMV RNAs containing deletions within the multifunctional 3′ end. EMBO Journal 5:1769–1774
   [Google Scholar]
4. Chaconas G., Van de sande J. H. 1980; 5′-³²P labelling of RNA and DNA restriction fragments. Methods in Enzymology 65:249–259
   [Google Scholar]
5. Chamberlain J. P. 1979; Fluorographic detection of radioactivity in polyacrylamide gels with a water-soluble fluor, sodium salicylate. Analytical Biochemistry 98:132–135
   [Google Scholar]
6. Collmer C. W., Tousignant M. E., Kaper J. M. 1983; Cucumber mosaic virus associated RNA 5. X. The complete nucleotide sequence of a CARNA 5 incapable of inducing tomato necrosis. Virology 127:230–234
   [Google Scholar]
7. donis- Keller H., Maxam A.M., Gilbert W. 1977; Mapping adenines, guanines and pyrimidines in RNA. Nucleic Acids Research 4:2527–2538
   [Google Scholar]
8. England T. E., Uhlenbeck O. C. 1978; 3′ terminal labelling of RNA with T₄ RNA ligase. Nature London: 275560–561
   [Google Scholar]
9. Fukuda M., Okada Y., Otsuki Y., Takebe I. 1980; The site of initiation of rod assembly on the RNA of a tomato and a cowpea strain of tobacco mosaic virus. Virology 101:493–502
   [Google Scholar]
10. Gallie D. R., Sleat D. E., Watts J. W., Turner P. C., Wilson T. M. A. 1987; The 5′-leader sequence of tobacco mosaic virus RNA enhances the expression of foreign gene transcripts In vitro and in vivo. Nucleic Acids Research 15:3257–3273
    [Google Scholar]
11. Gallie D.R., Sleat D. E., Watts J. W., Turner P.C., Wilson T. M. A. 1988; Mutational analysis of the tobacco mosaic virus 5′-leader for altered ability to enhance translation. Nucleic Acids Research 16:883–893
    [Google Scholar]
12. Garcia-Arenal F. 1988; Sequence and structure at the 3′ end of the U₂-strain of tobacco mosaic virus, a histidine accepting tobamovirus. Virology 167:201–206
    [Google Scholar]
13. Gibbs A. 1986; Tobamovirus classification. In The Plant Viruses 2168–178 Van Regenmortel M. H. V., Fraenkel-Conrat H. New York: Plenum Press;
    [Google Scholar]
14. Goelet P., Lomonosoff G. P., Butler P. J. G., Akam M. E., Gait M. J., Karn J. 1982; Nucleotide sequence of tobacco mosaic virus RNA. Proceedings of the National Academy of Sciences U.S.A 795818–5882
    [Google Scholar]
15. Haenni A. L., Joshi S., Chapeville F. 1982; tRNA-like structures in the genomes of RNA viruses. Progress in Nucleic Acids Research and Molecular Biology 27:85–104
    [Google Scholar]
16. Hall T.C., Marsh L. E., Dreher T. W. 1987; Analysis of brome mosaic virus replication and aminoacylation functions by site specific mutagenesis. Journal of Cell Science 7:287–301
    [Google Scholar]
17. Ishikawa M., Meshi T., Motoyoshi F., Takamatsu N., Okada Y. 1986; In vitro mutagenesis of the putative replicases genes of tobacco mosaic virus. Nucleic Acids Research 14:8291–8305
    [Google Scholar]
18. Jobling S. A., Gehrke L. 1987; Enhanced translation of chimaeric messenger RNAs containing a plant viral untranslated leader sequence. Nature London: 325622–625
    [Google Scholar]
19. Joshi R. L., Chapeville F., Haenni A. L. 1985; Conformational requirements of tobacco mosaic virus RNA for aminoacylation and adenylation. Nucleic Acids Research 13:347–354
    [Google Scholar]
20. Konarska M., Filipowicz W., Domdey H., Gross H. F. 1981; Binding of ribosomes to linear and circular forms of the 5′ terminal leader fragment of tobacco mosaic virus RNA. European Journal of Biochemistry 114:221–227
    [Google Scholar]
21. Kozak M. 1986; Point mutations define a sequence flanking the AUG initiator codon that modulates translation by eukaryotic ribosomes. Cell 44:283–292
    [Google Scholar]
22. Kukla B., Guilley H., Jonard G., Richards K. E., Mundry K. W. 1979; Characterization of long guanosine- free RNA sequences from the Dahlemense and U₂ strains of tobacco mosaic virus. European Journal of Biochemistry 98:61–66
    [Google Scholar]
23. Lloyd D. A., Mandeles S. 1970; Partial nucleotide sequences for the three unique T1 ribonuclease fragments of tobacco mosaic virus ribonucleic acid. Biochemistry 9:932–938
    [Google Scholar]
24. Meshi T., Kiyama R., Ohno T., Okada Y. 1983; Nucleotide sequence of the coat protein cistron and the 3′ non-coding region of cucumber green mottle mosaic virus (watermelon strain) RNA. Virology 127:54–64
    [Google Scholar]
25. Mundry K. W. 1969; Structural elements of viral ribonucleic acid and their variation. Molecular and General Genetics 105:361–377
    [Google Scholar]
26. Ohno T., Aoyagi M., Yamanashi Y., Saito H., Ikawa S., Meshi T., Okada Y. 1984; Nucleotide sequence of the tobacco mosaic virus (tomato strain) genome and comparison with the common strain genome. Journal of Biochemistry 96:1915–1923
    [Google Scholar]
27. Peattie D. A. 1979; Direct chemical method for sequencing RNA. Proceedings of the National Academy of Sciences U.S.A. 761760–1764
    [Google Scholar]
28. Richards K. E., Guilley H., Jonard G., Keith G. 1977; Leader sequence of 71 nucleotides devoid of G in tobacco mosaic virus RNA. Nature London: 267548–550
    [Google Scholar]
29. Richards K. E., Guilley H., Jonard G., Hirth L. 1978; Nucleotide sequence of the 5′ extremity of tobacco mosaic virus RNA. European Journal of Biochemistry 84:513–519
    [Google Scholar]
30. Rietveld K., Linschooten K., Pleu C. W. A., Bosch L. 1984; The three-dimensional folding of the tRNA-like structure of tobacco mosaic virus RNA. A new building principle applied twice. EMBO Journal 3:2613–2619
    [Google Scholar]
31. Sarnow P., Bernstein H. D., Baltimore D. 1986; A poliovirus temperature-sensitive RNA synthesis mutant located in a noncoding region of the genome. Proceedings of the National Academy of Sciences U.S.A. 83571–575
    [Google Scholar]
32. Solis I. 1989; Secuencia de nucleotidos y organizacion del RNA genomico de la cepa U₂-TMV del tobamovirus mosaico verde atenuado del tabaco (TMGMV). Ph.D. thesis, Polytechnic University of Madrid;
    [Google Scholar]
33. Tyc K., Konarska M., Gross H. J., Filipowicz W. 1984; Multiple ribosome binding to the 5′ terminal sequence of tobacco mosaic virus RNA. Assembly of an 80S ribosome mRNA complex at the AUU codon. European Journal of Biochemistry 140:503–511
    [Google Scholar]
34. van Belkum A., Abraham J. P., Pleij C. W. A., Bosch L. 1985; Five pseudoknots are present at the 204 nucleotides long 3′ non-coding region of tobacco mosaic virus RNA. Nucleic Acids Research 13:7673–7686
    [Google Scholar]
35. Wetter C., Conti M., Altschuch D., Tabillion R., van Regenmortel M. H. V. 1984; Pepper mild mottle virus, a tobamovirus infecting pepper cultivars in Sicily. Phytopathology 74:405–410
    [Google Scholar]
36. Wilbur W. J., Lipman D. J. 1983; Rapid similarity searches of nucleic acid and protein data banks. Proceedings of the National Academy of Sciences U.S.A. 80726–730
    [Google Scholar]
37. Wilson T. M. A. 1984; Cotranslational disassembly of tobacco mosaic virus In vitro. Virology 137:225–265
    [Google Scholar]
38. Zimmern D. 1975; The 5′ end group of tobacco mosaic virus RNA is m⁷G⁵pppGp. Nucleic Acids Research 2:1189–1201
    [Google Scholar]