1887

Abstract

Summary

The sequence of the fusion (F) glycoprotein mRNA of the Hallé strain of measles virus was determined from a cDN A clone representing the entire length of the mRNA. It contained 2384 nucleotides, excluding poly(A), with a 5′ consensus sequence typical of paramyxoviruses and a 3′ terminus found in measles virus mRNAs. The coding sequence was preceded by an unusually long (580 nucleotide) 5′ non-translated region, which contained 44% cytosine. The longest open reading frame coded for a polypeptide of 553 amino acids with a predicted molecular weight of 59·84K. Comparison of the sequence with that of the Edmonston strain of measles virus showed that the gene is highly conserved. No amino acid differences were observed between the two strains. The F polypeptide had three regions of high hydrophobicity: an N-terminal signal peptide, the N-terminus of FI and a C-terminal membrane-spanning region. The four potential asparagine-linked glycosylation sites (one in the signal peptide) were all in the F2 subunit. Comparison of the measles virus F amino acid sequence with other paramyxoviruses revealed homologies with these viruses. Certain regions such as the N terminus of F1 and ten cysteine residues which probably impose structural restraints were highly conserved.

Loading

Article metrics loading...

/content/journal/jgv/10.1099/0022-1317-68-6-1695
1987-06-01
2024-04-20
Loading full text...

Full text loading...

/deliver/fulltext/jgv/68/6/JV0680061695.html?itemId=/content/journal/jgv/10.1099/0022-1317-68-6-1695&mimeType=html&fmt=ahah

References

  1. Bellini W. J., Englund G., Rozenblatt S., Arnheiter J. 1985; Measles virus P gene codes for two proteins. Journal of Virology 53:908–919
    [Google Scholar]
  2. Bellini W. J., Englund G., Richardson C. D., Rozenblatt S., Lazzarini R. A. 1986; Matrix genes of measles virus and canine distemper virus: cloning, nucleotide sequences, and deduced amino acid sequences. Journal of Virology 58:408–416
    [Google Scholar]
  3. Bird A. 1986; CpG-rich islands and the function of DNA methylation. Nature, Ixmdon 321:209–213
    [Google Scholar]
  4. Blumberg B. M., Rose K., Simona M. G., Roux L., Giorgi C. 1984; Analysis of the Sendai virus M gene and protein. Journal of Virology 52:656–663
    [Google Scholar]
  5. Blumberg B. M., Giorgi C., Roux L., Raju R., Dowling P., Chollet A., Kolakofsky D. 1985a; Sequence determination of the Sendai virus HN gene and its comparison to the influenza virus glycoproteins. Cell 41:269–278
    [Google Scholar]
  6. Blumberg B. M., Giorgi C., Rose K., Kolakofsky D. 1985b; Sequence determination of the Sendai virus fusion protein gene. Journal of General Virology 66:317–331
    [Google Scholar]
  7. Chambers P., Millar N. S., Emmerson P. T. 1986; Nucleotide sequence of the gene encoding the fusion glycoprotein of Newcastle disease virus. Journal of General Virology 67:2685–2694
    [Google Scholar]
  8. Dowling P. C., Giorgi C., Roux L., Dethletson L., Galantowicz M. E., Blumberg B. M., Kolakofsky D. 1983; Molecular cloning of the 3'-proximal third of the Sendai virus genome. Proceedings of the National Academy of Sciences U.S.A.: 805213–5216
    [Google Scholar]
  9. Dowling P. C., Blumberg B. M., Menonna J., Adams J. E., Cook P., Crowley J. C., Kolakofsky D., Cook S. D. 1986; Transcriptional map of the measles virus genome. Journal of General Virology 67:1987–1992
    [Google Scholar]
  10. Gerald C., Buckland R., Barker R., Freeman G., Wild T. F. 1986; Measles virus haemagglutinin gene: cloning, complete nucleotide sequence analysis and expression in COS cells. Journal of General Virology 67:2695–2703
    [Google Scholar]
  11. Giraudon P., Wild T. F. 1985; Correlation between epitopes on hemagglutinin of measles virus and biological activities. Virology 144:46–58
    [Google Scholar]
  12. Graves M. C., Silver S. M., Choppin P. W. 1978; Measles virus polypeptide synthesis in infected cells. Virology 88:254–263
    [Google Scholar]
  13. Grunstein M., Hogness D. S. 1975; Colony hybridization: a method for the isolation of cloned DNAs that contain a specific gene. Proceedings of the National Academy of Sciences U.S.A.: 723961–3965
    [Google Scholar]
  14. Gupta K. C., Kingsbury D. W. 1984; Complete sequences of the intergenic and mRNA start signals in the Sendai virus genome. Nucleic Acids Research 12:3829–3841
    [Google Scholar]
  15. Hardwick J. M., Bussell R. H. 1978; Glycoproteins of measles virus under reducing and non-reducing conditions. Journal of Virology 25:687–692
    [Google Scholar]
  16. Horta-Barbosa L., Hamilton L. R., Witting B. W., Fuccillo D. A., Sever J. L. 1971; Subacute sclerosing panencephalitis of suppressed measles virus from lymph node biopsies. Science 173:840–841
    [Google Scholar]
  17. Hsu M-C., Scheid A., Choppin P. W. 1981; Activation of the Sendai virus fusion protein (F) involves a conformational change with exposure of a new hydrophobic region. Journal of Biological Chemistry 256:3557–3563
    [Google Scholar]
  18. Kozak M. 1983; Comparison of initiation of protein synthesis in procaryotes, eucaryotes and organelles. Microbiological Reviews 47:1–45
    [Google Scholar]
  19. Kozak M. 1986; Regulation of protein synthesis in virus-infected animal cells. Advances in Virus Research 31:229–292
    [Google Scholar]
  20. Krug R. M., Broni B. A., Bouloy M. 1979; Are the 5ʹ ends of influenza viral mRNAs synthesised in vivo donated by host mRNAs?. Cell 18:329–334
    [Google Scholar]
  21. Kyte J., Doolittle R. E. 1982; A simple method for displaying the hydropathic character of a protein. Journal of Molecular Biology 157:105–132
    [Google Scholar]
  22. Mcglnnes L. W., Morrison T. G. 1986; Nucleotide sequence of the gene encoding the Newcastle disease virus fusion protein and comparison of paramyxovirus fusion protein sequences. Virus Research 5:343–356
    [Google Scholar]
  23. Maxam A. M., Gilbert W. 1980; Sequencing end-labeled DNA with base-specific chemical cleavages. Methods in Enzymology 65:499–560
    [Google Scholar]
  24. Merz D. C., Scheid A., Choppin P. W. 1980; Importance of antibodies to the fusion glycoprotein of paramyxoviruses in the prevention of spread of infection. Journal of Experimental Medicine 151:275–288
    [Google Scholar]
  25. Mountcastle W. E., Choppin P. W. 1977; A comparison of the polypeptides of four measles virus strains. Virology 78:463–474
    [Google Scholar]
  26. Norrby E. 1971; The effect of a carbobenzoxy tripeptide on the biological activities of measles virus. Virology 44:599–608
    [Google Scholar]
  27. Norrby E. 1985; Measles vaccination, today and tomorrow. Annales de I’Institut Pasteur 136E:561–570
    [Google Scholar]
  28. Okayama H., Berg P. 1982; High efficiency cloning of full-length cDNA. Molecular and Cellular Biology 2:161–170
    [Google Scholar]
  29. Ordahl C. P., Evans G. L., Cooper T. A., Kunz G., Perriard J. C. 1984; Complete cDNA-derived amino acid sequence of chick muscle creatine kinase. Journal of Biological Chemistry 259:15224–15227
    [Google Scholar]
  30. Paterson R., Harris T., Lamb R. 1984; Fusion protein of the paramyxovirus simian virus 5: nucleotide sequence of mRNA predicts a highly hydrophobic glycoprotein. Proceedings of the National Academy of Sciences U.S.A.: 816706–6710
    [Google Scholar]
  31. Rice C. M., Strauss J. H. 1981; Nucleotide sequence of the 26S mRNA of Sindbis virus and deduced sequence of the encoded virus structural protein. Proceedings of the National Academy of Sciences U.S.A.: 782062–2066
    [Google Scholar]
  32. Richardson C., Hull D., Greer P., Hasel K., Berkovich A., Englund G., Bellini W., Rima A., Lazzarini R. 1986; The nucleotide sequence of the mRNA encoding the fusion protein of measles virus (Edmonston strain): a comparison of fusion proteins from several different paramyxoviruses. Virology 155:508–523
    [Google Scholar]
  33. Rima B. K., Martin S. J. 1979; Effect of undiluted passage on the polypeptides of measles virus. Journal of General Virology 44:135–144
    [Google Scholar]
  34. Rima B. K., Baczko K., Clarke D. K., Curran M. D., Martin S. J., Billeter M. A., Termeulen V. 1986; Characterization of clones for the sixth (L) gene and a transcriptional map for morbilliviruses. Journal of General Virology 67:1971–1978
    [Google Scholar]
  35. Rozenblatt S. O., Eizenberg G., Englund G., Bellini W. J. 1985; Sequence homology within the morbilliviruses. Journal of Virology 53:684–690
    [Google Scholar]
  36. Sanger F., Nicklen S., Culson A. R. 1977; DNA sequencing with chain-terminating inhibitors. Proceedings of the National Academy of Sciences U.S.A.: 745463–5467
    [Google Scholar]
  37. Sap J., Munoz A., Damm K., Goldberg Y., Ghysdael J., Leutz A., Beng H., Vennstrom B. 1986; The C-erb-A protein is a high-affinity receptor for thyroid hormone. Nature; London: 324635–640
    [Google Scholar]
  38. Schechter I., Burstein Y., Zemell R., Ziv E., Kantor F., Papermaster D. 1979; Messenger RNA of opsin from bovine retina: isolation and partial sequence of the in vitro translational product. Proceedings of the National Academy of Sciences U.S.A.: 762654–2658
    [Google Scholar]
  39. Scheid A., Choppin P. W. 1977; Two disulphide-linked polypeptide chains constitute the active F protein of paramyxoviruses. Virology 80:54–66
    [Google Scholar]
  40. Schmidt M. F. G. 1982; Acylation of viral spike glycoprotein: a feature of enveloped RNA viruses. Virology 116:327–338
    [Google Scholar]
  41. Shioda T., Iwasaki K., Shibuta H. 1986; Determination of the complete nucleotide sequence of the Sendai virus genome RNA and the predicted amino acid sequences of the F, HN and L proteins. Nucleic Acids Research 14:1545–1563
    [Google Scholar]
  42. Spriggs M. K., Olmsted R. A., Venkatesan S., Coligan J. E., Collins P. L. 1986; Fusion glycoprotein of human parainfluenza virus type 3: nucleotide sequence of the gene, direct identification of the cleavage-activation site, and comparison with other paramyxoviruses. Virology 152:241–251
    [Google Scholar]
  43. Stallcup K. C., Wechsler S. L., Fields B. N. 1979; Purification of measles virus and characterisation of subviral components. Journal of Virology 30:166–176
    [Google Scholar]
  44. Takeishi K., Kaneda S., Aysusawa D., Shimizu K., Gotoh O., Seno T. 1985; Nucleotide sequence of a functional cDNA for human thymidylate synthase. Nucleic Acids Research 13:2035–2043
    [Google Scholar]
  45. Tyrrell D. L. J., Norrby E. 1978; Structural polypeptides of measles virus. Journal of General Virology 39:219–229
    [Google Scholar]
  46. Varsanyi T. M., Jornvall H., Norrby E. 1985; Isolation and characterisation of the measles virus F1 polypeptide: comparison with other paramyxovirus fusion proteins. Virology 147:110–117
    [Google Scholar]
  47. Vonheijne G. 1985; Signal sequences: the limits of variation. Journal of Molecular Biology 184:99–105
    [Google Scholar]
  48. Walsh E. E., Schlesinger J. J., Brandriss M. W. 1984; Purification and characterization of GP90, one of the envelope glycoproteins of respiratory syncytial virus. Journal of General Virology 86:761–767
    [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/jgv/10.1099/0022-1317-68-6-1695
Loading
/content/journal/jgv/10.1099/0022-1317-68-6-1695
Loading

Data & Media loading...

This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error