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INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY logo International Journal of Systematic and Evolutionary Microbiology

Volume 74, Issue 6

sp. nov., an alkaliphilic bacterium isolated from soda soil, and genome-based reclassification of the genera and No Access

Abstract

The genera and are phylogenetically related genera within the family . Species of these genera were described using 16S rRNA gene-based phylogeny and phenotypic characteristics. However, the 16S rRNA gene identity and phylogeny reveal the controversy of the taxonomic status of these two genera. In this work, we examined the taxonomic positions of members of both genera using 16S rRNA gene phylogeny, phylogenomic analysis and further validated using overall genome-related indexes, including digital DNA–DNA hybridization, average nucleotide identity, average amino acid identity and percentage of conserved proteins. Based on phylogenetic and phylogenomic results, the current four species of the two genera clustered tightly into one clade with high bootstrap values, suggesting that the genus should be merged with . In addition, a novel species isolated from a soda soil sample collected from Anda City, PR China, and designated as HJB301 was also described. Phenotypic, chemotaxonomic, genomic and phylogenetic properties suggested that strain HJB301 (=CCTCC AB 2021113=KCTC 82977) represents a novel species of the genus , for which the name sp. nov. is proposed.

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  • Accepted:
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Keyword(s): alkaliphilic bacteria , Roseinatronobacter alkalisoli sp. nov. and soda soil
Funding
This study was supported by the:
  • Natural Science Foundation of Jiangsu Province of China (Award BK20150497)
    • Principle Award Recipient: LinZhu
  • Natural Science Foundation of Jiangsu Province of China (Award BK20150496)
    • Principle Award Recipient: WeiWei
  • Priority Academic Program Development of Jiangsu Higher Education Institutions (Award PAPD-2018-87)
    • Principle Award Recipient: WeiWei
  • National Natural Science Foundation of China (Award 31600069)
    • Principle Award Recipient: LinZhu
  • National Natural Science Foundation of China (Award 41503068)
    • Principle Award Recipient: WeiWei
  • National Natural Science Foundation of China (Award 31770543)
    • Principle Award Recipient: WeiWei
© 2024 The Authors
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2024-06-04
2025-03-17
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Roseinatronobacter alkalisoli sp. nov., an alkaliphilic bacterium isolated from soda soil, and genome-based reclassification of the genera Rhodobaca and Roseinatronobacter
Int J Syst Evol Microbiol 74, 006402 (2024); https://doi.org/10.1099/ijsem.0.006402
/content/journal/ijsem/10.1099/ijsem.0.006402
/content/journal/ijsem/10.1099/ijsem.0.006402
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