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Abstract

Strain F4 (=KACC 22401=JCM 34836), a novel Gram-stain-negative, aerobic, non-spore-forming, non-motile and rod-shaped bacterium, was isolated from camel () faeces. The newly identified bacterial strain F4 was grown in Reasoner's 2A medium [0–2 % (w/v) NaCl (optimum, 0 %), pH 7.0–8.0 (optimum, pH 7.0), and 18–40 °C (optimum, 30 °C)]. Phylogenetic analysis based on 16S rRNA gene sequencing confirmed that strain F4 belonged to the genus , with its closest neighbours being DSM 19056 (98.0 %), CCUG 52764 (97.3 %), WG4 (95.7 %) and Chj70 (94.7 %). Complete genome sequence of strain F4 was obtained using a hybrid assembly pipeline integrating sequences obtained using both the Oxford Nanopore and Illumina platforms. Genomic comparisons of strain F4 with type species in the genus were conducted using digital DNA–DNA hybridization, average nucleotide identity and average amino acid identity, resulting in values of ≤20.5, ≤77.9 and ≤80.8 %, respectively. The genomic DNA G+C content of type strain F4 was 39.7 mol%. The major fatty acids of the strain F4 were anteiso-C and iso-C, and MK-6 was its major respiratory quinone. Moreover, the major polar lipid of strain F4 was phosphatidylethanolamine. The genome of strain F4 harbours only one antibiotic resistance gene () encoding a -lactamase, which attributes -lactam antibiotic resistance. Based on the results of our chemotaxonomic, genotypic and phenotype analyses, strain F4 is identified as a novel species of the genus , for which the name sp. nov. is proposed.

Funding
This study was supported by the:
  • National Institute of Biological Resources (Award NIBR202002108)
    • Principle Award Recipient: WoojunPark
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2022-05-31
2024-12-12
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