Exophiala pseudooligosperma sp. nov., a novel black yeast from soil in southern China

References

1. de Hoog GS. Evolution of black yeasts: possible adaptation to the human host. Antonie van Leeuwenhoek 1993; 63:105–109 [View Article] [PubMed]
   [Google Scholar]
2. Isola D, Zucconi L, Onofri S, Caneva G, de Hoog GS et al. Extremotolerant rock inhabiting black fungi from italian monumental sites. Fungal Divers 2015; 76:75
   [Google Scholar]
3. De Hoog GS, Zeng JS, Harrak MJ, Sutton DA. Exophiala xenobiotica sp. nov., an opportunistic black yeast inhabiting environments rich in hydrocarbons. Antonie van Leeuwenhoek 2006; 90:257–268 [View Article] [PubMed]
   [Google Scholar]
4. Carmichael JW. Cerebral mycetoma of trout due to a Phialophora-like fungus. Sabouraudia 1966; 5:120–123 [View Article] [PubMed]
   [Google Scholar]
5. Borman AM, Fraser M, Szekely A, Larcombe DE, Johnson EM et al. Rapid identification of clinically relevant members of the genus Exophiala by matrix-assisted laser desorption ionization-time of flight mass spectrometry and description of two novel species, Exophiala campbellii and Exophiala lavatrina. J Clin Microbiol 2017; 55:1162–1176 [View Article] [PubMed]
   [Google Scholar]
6. de Hoog GS, Vicente VA, Najafzadeh MJ, Harrak MJ, Badali H et al. Waterborne Exophiala species causing disease in cold-blooded animals. Persoonia 2011; 27:46–72 [View Article] [PubMed]
   [Google Scholar]
7. Untereiner WA. Taxonomy of selected members of the ascomycete genus Capronia with notes on anamorph-teleomorph connections. Mycologia 1997; 89:120 [View Article]
   [Google Scholar]
8. Sun W, Su L, Yang S, Sun J, Liu B et al. Unveiling the hidden diversity of rock-inhabiting fungi: Chaetothyriales from China. JoF 2020; 6:187 [View Article]
   [Google Scholar]
9. Zeng JS, Sutton DA, Fothergill AW, Rinaldi MG, Harrak MJ et al. Spectrum of clinically relevant Exophiala species in the united states. J Clin Microbiol 2007; 45:3713–3720 [View Article] [PubMed]
   [Google Scholar]
10. Addy HD, Piercey MM, Currah RS. Microfungal endophytes in roots. Can J Bot 2005; 83:1–13
    [Google Scholar]
11. Maciá-Vicente JG, Glynou K, Piepenbring M. A new species of Exophiala associated with roots. Mycol Progress 2016; 15:18
    [Google Scholar]
12. Iwatsu T, Udagawa S, Takase T. A new species of Exophiala recovered from drinking water. Mycotaxon 1991; 41:322–328
    [Google Scholar]
13. Bates ST, Reddy GSN, Garcia-Pichel F. Exophiala crusticola anam. nov. (affinity Herpotrichiellaceae), a novel black yeast from biological soil crusts in the Western United States. Int J Syst Evol Microbiol 2006; 56:2697–2702 [View Article] [PubMed]
    [Google Scholar]
14. Index Fungorum Index Fungorum; 2021 http://www.indexfungorum.org/names/Names.asp
15. Haase G, Sonntag L, Melzer-Krick B, De Hoog GS. Phylogenetic inference by SSU-gene analysis of members of the Herpotrichiellaceae with special reference to human pathogenic species. Stud Mycol 1999; 43:80–97
    [Google Scholar]
16. de Hoog GS, Vicente V, Caligiorne RB, Kantarcioglu S, Tintelnot K et al. Species diversity and polymorphism in the Exophiala spinifera clade containing opportunistic black yeast-like fungi. J Clin Microbiol 2003; 41:4767–4778 [View Article] [PubMed]
    [Google Scholar]
17. Zheng H, Yu Z, Xu J, Castañeda-Ruiz RF, Qiao M. Ramichloridium endophyticum sp. nov., a novel species of endophytic fungus from Potamogeton pectinatus. Int J Syst Evol Microbiol 2020; 70:3433–3439 [View Article] [PubMed]
    [Google Scholar]
18. Qiao M, Zheng H, Lv R, Yu Z. Neodactylariales, Neodactylariaceae (Dothideomycetes, Ascomycota): new order and family, with a new species from China. MycoKeys 2020; 73:69–85 [View Article] [PubMed]
    [Google Scholar]
19. Zheng H, Li J, Guo JS, Qiao M, Yu ZF. Anacraspedodidymum submersum, a new species of aquatic hyphomycetes from southwest China. Int J Syst Evol Microbiol 2021; 71:004650
    [Google Scholar]
20. Qiao M, Zhang Z, Yang L, Yu Z. Staphylotrichum sinense sp. nov., a new hyphomycete (Chaetomiaceae) from China. Int J Syst Evol Microbiol 2019; 71:004747 [View Article]
    [Google Scholar]
21. Zheng H, Qiao M, Lv YF, Du X, Zhang KQ et al. New species of soil-inhabiting and aquatic endophytic Trichoderma from southwest China. Journal of Fungi 2021; 7:467
    [Google Scholar]
22. Marizeth G, Lorenzo L, Michel DV, Giraldo LA et al. Diversity of yeast species from Dutch garden soil and the description of six novel Ascomycetes. FEMS Yeast Res 2018; 7:7
    [Google Scholar]
23. Turner D, Kovacs W, Kuhls K, Lieckfeldt E, Peter B et al. Biogeography and phenotypic variation in Trichoderma sect. Longibrachiatum and associated Hypocrea species. Mycological Research 1997; 101:449–459
    [Google Scholar]
24. White TJ, Bruns T, Lee S, Taylor J. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In PCR Protocols: A Guide to Methods and Applications vol. 18 1990 pp 315–322
    [Google Scholar]
25. Vilgalys R, Hester M. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J Bacteriol 1990; 172:4238–4246 [View Article] [PubMed]
    [Google Scholar]
26. Rehner SA, Samuels GJ. Taxonomy and phylogeny of Gliocladium analysed from nuclear large subunit ribosomal DNA sequences. Mycological Res 1994; 98:625–634 [View Article]
    [Google Scholar]
27. Glass NL, Donaldson GC. Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes. Appl Environ Microbiol 1995; 61:1323–1330 [View Article] [PubMed]
    [Google Scholar]
28. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 1997; 25:4876–4882 [View Article] [PubMed]
    [Google Scholar]
29. Hall TA. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 1999; 41:95–98
    [Google Scholar]
30. Kumar S, Stecher G, Tamura K. MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol Biol Evol 2016; 33:1870–1874
    [Google Scholar]
31. Huelsenbeck JP, Ronquist F. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 2001; 17:754–755 [View Article] [PubMed]
    [Google Scholar]
32. Nylander JAA. MrModeltest v2.3 Evolutionary Biology Centre, Uppsala University; 2008 http://www.abc.se/~nylander/mrmodeltest2/mrmodeltest2.html/2008
33. Sun X, Guo LD. Micronematobotrys, a new genus and its phylogenetic placement based on rDNA sequence analyses. Mycol Progress 2010; 9:567–574
    [Google Scholar]
34. Rambaut A. FigTree v1.4.2 Edinburgh: Institute of Evolutionary Biology, University of Edinburgh; 2012 http://tree.bio.ed.ac.uk/software/ figtree/
35. McGinnis MR. Taxonomy of Exophiala jeanselmei (Langeron) McGinnis and Padhye. Mycopathologia 1978; 65:79–87 [View Article] [PubMed]
    [Google Scholar]
36. Zeng JS, De hoog GS. Exophiala spinifera and its allies: diagnostics from morphology to DNA barcoding. Med Mycol 2008; 46:193–208 46-3-193 [View Article]
    [Google Scholar]
37. Sudduth EJ, Crumbley AJ 3rd, Farrar WE. Phaeohyphomycosis due to Exophiala species: clinical spectrum of disease in humans. Clin Infect Dis 1992; 15:639–644 [View Article] [PubMed]
    [Google Scholar]
38. de Hoog GS, Takeo K, Yoshida S, Göttlich E, Nishimura K et al. Pleoanamorphic life cycle of Exophiala (Wangiella) dermatitidis. Antonie van Leeuwenhoek 1994; 65:143–153 [View Article] [PubMed]
    [Google Scholar]
39. Uijthof JMJ. Relationships within the black yeast genus Exophiala based on ITS1 sequences. Mycological Research 1996; 100:1265–1271 [View Article]
    [Google Scholar]
40. De Hoog GS, Mcginnis MR. Ascomycetous black yeasts. Stud Mycol 1987; 30:187–199
    [Google Scholar]
41. Yong LK, Wiederhold NP, Sutton DA, Sandoval-Denis M, Lindner JR et al. Morphological and molecular characterization of Exophiala polymorpha sp. nov. isolated from sporotrichoid lymphocutaneous lesions in a patient with Myasthenia Gravis. J Clin Microbiol 2015; 53:2816–2822 [View Article] [PubMed]
    [Google Scholar]
42. Arzanlou M, Groenewald JZ, Gams W, Braun U, Shin H-D et al. Phylogenetic and morphotaxonomic revision of Ramichloridium and allied genera. Stud Mycol 2007; 58:57–93 [View Article] [PubMed]
    [Google Scholar]
43. Crous PW, Cowan DA, Maggs-Kölling G, Yilmaz N, Larsson E et al. Fungal planet description sheets: 1112-1181. Persoonia 2020; 45:251–409 [View Article] [PubMed]
    [Google Scholar]
44. Vitale RG, Hoog G de. Molecular diversity, new species and antifungal susceptibilities in the Exophiala spinifera clade. Med Mycol 2002; 40:545–556
    [Google Scholar]