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Volume 71, Issue 3

sp. nov., isolated from a soil sample of Collins Glacier front, Antarctica Free

Abstract

A Gram-stain-negative, rod-shaped, and aerobic bacterium, strain 16-35-5, was isolated from Collins Glacier front soil from the Fildes Peninsula, Antarctica. The bacterium grew optimally at 28 °C, pH 7.0 and in the presence of 0–4.0 % (w/v) NaCl. On the basis of the results of 16S rRNA gene sequence phylogenetic analyses, it was concluded that 16-35-5 represented a member of the genus and had the highest sequence similarities with CFBP 3232 (96.48 %). The genome of 16-35-5 is 4.2 Mb long with a DNA G+C content of 66.3 mol%. Average nucleotide identity (ANI) value between the genomes of 16-35-5 and DSM 27981, was 85.29 %. Strain 16-35-5 had ubiquinone-8 (Q-8) as the respiratory ubiquinone. The polar lipids of 16-35-5 were consisted of phosphatidylethanolamine, diphosphatidylglycerol and phosphatidylglycerol. The main fatty acids were summed feature 3 (Cω7 and/or Cω6, 25.2 %), summed feature 8 (Cω7 and/or Cω6, 12.9 %), C (35.2 %), and C cyclo (19.0 %). On the basis of the evidence presented in this study, 16-35-5 should be classified as representing a novel species of the genus , for which the name sp. nov., is proposed, with the type strain 16-35-5 (=CCTCC AB 2019325=KCTC 72915).

  • Received:
  • Accepted:
  • Published Online:
Keyword(s): Acidovorax antarcticus , phylogenetic analysis and taxonomy
Funding
This study was supported by the:
  • the Chinese Polar Scientific Strategy Research Fund (Award IC201706)
    • Principle Award Recipient: FangPeng
  • Innovative Research Group Project of the National Natural Science Foundation of China (CN) (Award Grant No. 31270538)
    • Principle Award Recipient: FangPeng
  • the R&D Infrastructure and Facility Development Program of the Ministry of Science and Technology of the People’s Republic of China (Award Grant No. NIMR-2019-8)
    • Principle Award Recipient: FangPeng
  • Key Technology Research and Development Program of Shandong (CN) (Award 2018YFC1406701)
    • Principle Award Recipient: FangPeng
© 2021 The Authors
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2024-04-19
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Acidovorax antarcticus sp. nov., isolated from a soil sample of Collins Glacier front, Antarctica
Int J Syst Evol Microbiol 71, 004744 (2021); https://doi.org/10.1099/ijsem.0.004744
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