gen. nov., sp. nov., a novel member of the family isolated from surface seawater of the Mariana Trench Free

Abstract

A Gram-stain-negative, aerobic, ovoid-rod-shaped bacterium, designated strain SM1903, was isolated from surface seawater of the Mariana Trench. The strain grew at 15–37 °C (optimum, 35 °C) and with 1–15 % (optimum, 4 %) NaCl. It hydrolysed aesculin but did not reduce nitrate to nitrite and hydrolyse Tween 80. Phylogenetic analysis based on the 16S rRNA gene sequences revealed that strain SM1903 formed a separate lineage within the family , sharing the highest 16S rRNA gene sequence similarity with type strains of (95.7 %) and (95.7 %). In phylogenetic trees based on single-copy OCs and whole proteins sequences, strain SM1903 fell within a sub-cluster encompassed by , and and formed a branch adjacent to . The major cellular fatty acids were summed feature 8 (C 7 and/or C 6), C and 11-methyl-C 7. The polar lipids mainly comprised phosphatidylglycerol, phosphatidylcholine, one unidentified lipid, one unidentified aminolipid, and one unidentified glycolipid. The solo respiratory quinone was ubiquinone-10. The genomic DNA G+C content of strain SM1903 was 66.0 mol%. Based on the results of phenotypic, chemotaxonomic, and phylogenetic characterization for strain SM1903, it is considered to represent a novel species of a novel genus in the family , for which the name gen. nov., sp. nov. is proposed. The type strain is SM1903 (=MCCC 1K03608=KCTC 72046).

Funding
This study was supported by the:
  • the Science and Technology Basic Resources Investigation Program of China (Award 2017FY100804)
    • Principle Award Recipient: Xi-Ying Zhang
  • Taishan Scholars Program of Shandong Province (Award tspd20181203)
    • Principle Award Recipient: Yu-Zhong Zhang
  • National Science Foundation of China (Award 31870052)
    • Principle Award Recipient: Xiu-Lan Chen
  • National Science Foundation of China (Award 31670063)
    • Principle Award Recipient: Xi-Ying Zhang
  • AoShan Talents Cultivation Program (Award 2017ASTCP-OS14)
    • Principle Award Recipient: Yu-Zhong Zhang
  • National Key R&D Program of China (Award 2018YFC1406504)
    • Principle Award Recipient: Xiao-Yan Song
  • National Key R&D Program of China (Award 2018YFC0310704)
    • Principle Award Recipient: Xiu-Lan Chen
  • National Key R&D Program of China (Award 2016YFA0601303)
    • Principle Award Recipient: Not Applicable
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2020-10-14
2024-03-28
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