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INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY logo

Volume 70, Issue 7

sp. nov., a species isolated from L. rhizosphere in northeast Mexico Free

Abstract

During the isolation of bacteria from the L. rhizosphere in northeast Mexico, four strains with similar BOX-PCR patterns were collected. The 16S rRNA gene sequences of all four strains were very similar to each other and that of the type strains of CH34 (98.49 % sequence similarity) and N-1 (98.35 %). The genome of strain ASC-9842 was sequenced and compared to those of other species. ANIb and ANIm values with the most closely related species were lower than 95%, while the DNA–DNA hybridization values were also much lower than 70 %, consistent with the proposal that they represent a novel species. This conclusion was supported by additional phenotypic and chemotaxonomic analyses. Therefore, the name sp. nov. is proposed with the type strain ASC-9842 (=LMG 26414=CIP 110327).

  • Received:
  • Accepted:
  • Published Online:
Keyword(s): agave , Cupriavidus , plant-associated and rhizosphere
Funding
This study was supported by the:
  • Office of Science (Award DE-AC02-05CH11231)
    • Principle Award Recipient: William B. Whitman
  • Secretaría de Investigación y Posgrado, Instituto Politécnico Nacional (Award SIP20196674)
    • Principle Award Recipient: Paulina Estrada de los Santos
© 2020 The Authors
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2020-06-15
2024-04-23
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Cupriavidus agavae sp. nov., a species isolated from Agave L. rhizosphere in northeast Mexico
Int J Syst Evol Microbiol 70, 4165 (2020); https://doi.org/10.1099/ijsem.0.004263
/content/journal/ijsem/10.1099/ijsem.0.004263
/content/journal/ijsem/10.1099/ijsem.0.004263
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