An emended description of Sasi Jyothsna . 2013: genomic and phenotypic insights Free

Abstract

was originally described as the first obligate anaerobe in this genus by Sasi Jyothsna . 2013. The complete genome sequence of the type strain of this species was determined and analysed. Genes characteristic for organisms capable of aerobic growth were identified, and the ability of the organism to grow under microaerobic and aerobic conditions was confirmed in two independent laboratories. The description of is thus emended and the wider ramifications of these findings are discussed.

Funding
This study was supported by the:
  • RSNZ (Award 17-LIU-003-CSG)
    • Principle Award Recipient: Stephen L. W. On
Loading

Article metrics loading...

/content/journal/ijsem/10.1099/ijsem.0.004214
2020-05-11
2024-03-29
Loading full text...

Full text loading...

/deliver/fulltext/ijsem/70/6/3921.html?itemId=/content/journal/ijsem/10.1099/ijsem.0.004214&mimeType=html&fmt=ahah

References

  1. Vandamme P, Falsen E, Rossau R, Hoste B, Segers P et al. Revision of Campylobacter, Helicobacter, and Wolinella taxonomy: emendation of generic descriptions and proposal of Arcobacter gen. nov. Int J Syst Bacteriol 1991; 41:88–103 [View Article][PubMed]
    [Google Scholar]
  2. Sasi Jyothsna TS, Rahul K, Ramaprasad EVV, Sasikala C, Ramana CV. Arcobacter anaerophilus sp. nov., isolated from an estuarine sediment and emended description of the genus Arcobacter . Int J Syst Evol Microbiol 2013; 63:4619–4625 [View Article][PubMed]
    [Google Scholar]
  3. Pérez-Cataluña A, Salas-Massó N, Diéguez AL, Balboa S, Lema A et al. Revisiting the taxonomy of the genus Arcobacter: Getting order from the chaos. Front Microbiol 2018; 9: 2077. Corrigendum: Pérez-Cataluña, A., Salas-Massó, N., Diéguez, A.L., Balboa, S., Lema, A., Romalde, J.L.,Figueras, M.J. Revisiting the taxonomy of the genus Arcobacter: Getting order from the chaos. Front. Microbiol 2018; 9:3123
    [Google Scholar]
  4. Miller WG, Yee E, Bono JL. Complete Genome Sequences of the Arcobacter cryaerophilus strains ATCC 43158T and ATCC 49615. Microbiol Resour Announc 2018; 7:e01463–18 [View Article][PubMed]
    [Google Scholar]
  5. Roalkvam I, Drønen K, Stokke R, Daae FL, Dahle H et al. Physiological and genomic characterization of Arcobacter anaerophilus IR-1 reveals new metabolic features in Epsilonproteobacteria. Front Microbiol 2015; 6:987 [View Article][PubMed]
    [Google Scholar]
  6. Meier-Kolthoff JP, Klenk H-P, Göker M. Taxonomic use of DNA G+C content and DNA–DNA hybridization in the genomic age. Int J Syst Evol Microbiol 2014; 64:352–356 [View Article][PubMed]
    [Google Scholar]
  7. On SLW, Miller WG, Houf K, Fox JG, Vandamme P. Minimal standards for describing new species belonging to the families Campylobacteraceae and Helicobacteraceae: Campylobacter, Arcobacter, Helicobacter and Wolinella spp. Int J Syst Evol Microbiol 2017; 67:5296–5311 [View Article][PubMed]
    [Google Scholar]
  8. Goris J, Konstantinidis KT, Klappenbach JA, Coenye T, Vandamme P et al. DNA–DNA hybridization values and their relationship to whole-genome sequence similarities. Int J Syst Evol Microbiol 2007; 57:81–91 [View Article][PubMed]
    [Google Scholar]
  9. Parks DH, Chuvochina M, Waite DW, Rinke C, Skarshewski A et al. A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life. Nat Biotechnol 2018; 36:996–1004 [View Article][PubMed]
    [Google Scholar]
  10. Parker CT, Tindall BJ, Garrity GM. International Code of Nomenclature of Prokaryotes. Int J Syst Evol Microbiol 2019; 69:S1–S111 [View Article][PubMed]
    [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/ijsem/10.1099/ijsem.0.004214
Loading

Most cited Most Cited RSS feed